TomoSeq data search

Data search

Results for MligTC455_27537

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27537	384	8.00	Mlig455_006514, Mlig455_006630	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.415 Region-enriched R4: 5.650/0.00051	CRB2, NOTCH2	Mlig455_006514 {REF} {Length: 4855} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=175.4]; Human growth factor-like EGF [PF12661.9, score=89.0]; Laminin G domain [PF02210.26, score=30.6]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=263, Expect=2e-70]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=262, Expect=3e-70]} {Dmel: FBgn0004647, N, Notch, [Score=258, Expect=3e-69]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=187, Expect=1e-47]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_9776.1} Mlig455_006630 {REF} {Length: 4640} {Pfam: EGF-like domain [PF00008.29, score=165.3]; Human growth factor-like EGF [PF12661.9, score=85.9]; Laminin G domain [PF02210.26, score=31.0]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=334, Expect=1e-95]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=333, Expect=5e-95]} {Dmel: FBgn0259685, crb, crumbs, [Score=422, Expect=5e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=237, Expect=5e-63]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=253, Expect=5e-68]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_693.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27537

384

8.00

Mlig455_006514, Mlig455_006630

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.415

Region-enriched R4: 5.650/0.00051

CRB2, NOTCH2

Mlig455_006514 {REF} {Length: 4855} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=175.4]; Human growth factor-like EGF [PF12661.9, score=89.0]; Laminin G domain [PF02210.26, score=30.6]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=263, Expect=2e-70]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=262, Expect=3e-70]} {Dmel: FBgn0004647, N, Notch, [Score=258, Expect=3e-69]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=187, Expect=1e-47]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_9776.1}

Mlig455_006630 {REF} {Length: 4640} {Pfam: EGF-like domain [PF00008.29, score=165.3]; Human growth factor-like EGF [PF12661.9, score=85.9]; Laminin G domain [PF02210.26, score=31.0]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=334, Expect=1e-95]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=333, Expect=5e-95]} {Dmel: FBgn0259685, crb, crumbs, [Score=422, Expect=5e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=237, Expect=5e-63]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=253, Expect=5e-68]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_693.1}

Cumulative graph for MligTC455_27537

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.773	3.531	0.99959	1.00000
RegionR2	-0.252	3.531	0.81924	1.00000
RegionR3	1.649	3.531	0.15542	0.66671
RegionR4	5.65	3.531	0.00003	0.00051
RegionR5	2.159	3.531	0.06087	0.21542
RegionR6	1.033	3.531	0.38919	0.96432
RegionR7	1.474	3.531	0.25556	0.88287
RegionR8	-4.938	3.531	0.99971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.511	3.531	1.00000	1.00000
RegenerationR2	0.974	3.531	0.27395	0.71927
RegenerationR3	0.326	3.531	0.76292	0.96857
RegenerationR4	-0.52	3.531	0.60815	0.91664
RegenerationR5	1.335	3.531	0.14193	0.55580
RegenerationR6	0.794	3.531	0.41888	0.75009
RegenerationBL	1.28	3.531	0.40758	0.77693
RegenerationTP	1.745	3.531	0.40630	0.83401

Genes with expression patterns similar to MligTC455_27537

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27537	384	8	Mlig455_006514, Mlig455_006630	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.415 Region-enriched R4: 5.650/0.00051	CRB2, NOTCH2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006514 {REF} {Length: 4855} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=175.4]; Human growth factor-like EGF [PF12661.9, score=89.0]; Laminin G domain [PF02210.26, score=30.6]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=263, Expect=2e-70]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=262, Expect=3e-70]} {Dmel: FBgn0004647, N, Notch, [Score=258, Expect=3e-69]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=187, Expect=1e-47]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_9776.1} Mlig455_006630 {REF} {Length: 4640} {Pfam: EGF-like domain [PF00008.29, score=165.3]; Human growth factor-like EGF [PF12661.9, score=85.9]; Laminin G domain [PF02210.26, score=31.0]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=334, Expect=1e-95]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=333, Expect=5e-95]} {Dmel: FBgn0259685, crb, crumbs, [Score=422, Expect=5e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=237, Expect=5e-63]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=253, Expect=5e-68]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_693.1}
2.	MligTC455_40666	254	5.28	Mlig455_064586, Mlig455_064587	Neo: - Age: Down-Up-Down	TRAPPC13	1.69	-	-	-	-	0.732	0.958	Mlig455_064586 {REF} {Length: 1204} {Pfam: Protein of unknown function (DUF974) [PF06159.15, score=227.4]; TRAPP trafficking subunit Trs65 [PF12735.9, score=19.9]} {Human: ENSG00000113597, TRAPPC13, trafficking protein particle complex 13, [RH, Score=338, Expect=1e-111]} {Mouse: ENSMUSG00000021711, Trappc13, trafficking protein particle complex 13, [RH, Score=333, Expect=4e-110]} {Dmel: FBgn0032204, CG4953, [RH, Score=244, Expect=3e-75]} {Celegans: WBGene00016964, C56C10.7, Probable trafficking protein particle complex subunit 13 homolog, [RH, Score=247, Expect=7e-77]} {Smed: dd_Smed_v6_7189_0_1, dd_Smed_v6_7189_0_1, [RH, Score=278, Expect=7e-89]} {RNA1509_52387} {RNA1310_62272} {RNA815_7017} Mlig455_064587 {REF} {Length: 1214} {Pfam: Protein of unknown function (DUF974) [PF06159.15, score=227.4]; TRAPP trafficking subunit Trs65 [PF12735.9, score=19.9]} {Human: ENSG00000113597, TRAPPC13, trafficking protein particle complex 13, [RH, Score=338, Expect=1e-111]} {Mouse: ENSMUSG00000021711, Trappc13, trafficking protein particle complex 13, [RH, Score=333, Expect=4e-110]} {Dmel: FBgn0032204, CG4953, [RH, Score=244, Expect=3e-75]} {Celegans: WBGene00016964, C56C10.7, Probable trafficking protein particle complex subunit 13 homolog, [RH, Score=247, Expect=7e-77]} {Smed: dd_Smed_v6_7189_0_1, dd_Smed_v6_7189_0_1, [RH, Score=278, Expect=7e-89]} {RNA1509_48982, RNA1509_52387} {RNA1310_62272, RNA1509_48982} {RNA1509_48982, RNA815_7017}
3.	MligTC455_14961	39	0.82	Mlig455_048867	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
4.	MligTC455_03503	75	1.57	Mlig455_042645	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.368		0.961	-	-	-	-	0.961	-	Mlig455_042645 {REF} {Length: 2491} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=36.7]} {Smed: dd_Smed_v6_8117_0_1, dd_Smed_v6_8117_0_1, [Score=77.8, Expect=2e-15]} {RNA1509_19205, RNA1509_53675} {RNA1310_10802.1, RNA1509_19205, RNA1509_53675} {RNA1509_19205, RNA1509_53675, RNA815_4389.1}
5.	MligTC455_08549	19	0.4	Mlig455_044281	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_044281 {REF} {Length: 1325} {NoTransDecoderORF} {RNA1310_47481} {RNA815_20504}
6.	MligTC455_00053	10	0.2	Mlig455_045698	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_045698 {REF} {Length: 347} {NoTransDecoderORF}