Data search


search
Exact
Search

Results for MligTC455_08876

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08876 159 3.32 Mlig455_040760

Neo: -

Age: Down-Down-Up

MPP5 Mlig455_040760 {REF} {Length: 1657} {Pfam: Guanylate kinase [PF00625.23, score=71.8]; SH3 domain [PF00018.30, score=38.7]; Variant SH3 domain [PF07653.19, score=32.1]; PDZ domain [PF00595.26, score=24.6]; PDZ domain [PF17820.3, score=20.8]; Variant SH3 domain [PF14604.8, score=20.4]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=180, Expect=1e-49]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=179, Expect=1e-49]} {Dmel: FBgn0050021, metro, menage a trois, [Score=158, Expect=7e-43]} {Celegans: WBGene00002991, lin-2, [Score=161, Expect=1e-43]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=144, Expect=3e-37]} {RNA1509_32149} {RNA1310_16841} {RNA815_8152}

Cumulative graph for MligTC455_08876

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.621 2.465 0.06037 0.56353
RegionR2 2.106 2.465 0.07920 0.34455
RegionR3 2.596 2.465 0.00404 0.08250
RegionR4 0.143 2.465 0.80780 1.00000
RegionR5 0.717 2.465 0.49940 0.86240
RegionR6 2.017 2.465 0.04176 0.38350
RegionR7 0.693 2.465 0.57373 1.00000
RegionR8 -0.651 2.465 0.97173 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.842 2.465 0.99991 1.00000
RegenerationR2 0.566 2.465 0.44755 0.84435
RegenerationR3 0 2.465 0.98927 1.00000
RegenerationR4 1.231 2.465 0.18480 0.62602
RegenerationR5 0.287 2.465 0.72657 0.96168
RegenerationR6 -0.117 2.465 0.89334 1.00000
RegenerationBL -0.436 2.465 0.72443 1.00000
RegenerationTP 1.147 2.465 0.34243 0.78523


Genes with expression patterns similar to MligTC455_08876

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08876 159 3.32 Mlig455_040760

Neo: -

Age: Down-Down-Up

MPP5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040760 {REF} {Length: 1657} {Pfam: Guanylate kinase [PF00625.23, score=71.8]; SH3 domain [PF00018.30, score=38.7]; Variant SH3 domain [PF07653.19, score=32.1]; PDZ domain [PF00595.26, score=24.6]; PDZ domain [PF17820.3, score=20.8]; Variant SH3 domain [PF14604.8, score=20.4]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=180, Expect=1e-49]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=179, Expect=1e-49]} {Dmel: FBgn0050021, metro, menage a trois, [Score=158, Expect=7e-43]} {Celegans: WBGene00002991, lin-2, [Score=161, Expect=1e-43]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=144, Expect=3e-37]} {RNA1509_32149} {RNA1310_16841} {RNA815_8152}
2. MligTC455_32933 209 4.36 Mlig455_009630

Neo: -

Age: -

1.816 - - - 0.956 - 0.860 Mlig455_009630 {REF} {Length: 3041} {RNA1509_24300, RNA1509_53873} {RNA1310_15480.3, RNA1509_53873} {RNA1509_53873, RNA815_6681.1}
3. MligTC455_42191 379 7.9 Mlig455_012126, Mlig455_029001

Neo: -

Age: Down-Up-Up

0.95 - - 0.950 - - -

Mlig455_012126 {REF} {Length: 1565} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=53.1, Expect=4e-09]} {RNA1310_28170} {RNA815_25748}

Mlig455_029001 {REF} {Length: 1721} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=52.8, Expect=6e-09]} {RNA1509_52997} {RNA1310_28170} {RNA815_25748}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA