TomoSeq data search

Data search

Results for MligTC455_08878

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08878

1102

22.96

Mlig455_066779

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.617

MPP3

Mlig455_066779 {REF} {Length: 1701} {Pfam: Guanylate kinase [PF00625.23, score=75.6]} {Human: ENSG00000161647, MPP3, membrane palmitoylated protein 3, [Score=99.4, Expect=2e-23]; ENSG00000108852, MPP2, membrane palmitoylated protein 2, [Score=95.9, Expect=1e-22]} {Mouse: ENSMUSG00000052373, Mpp3, membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3), [Score=98.2, Expect=3e-23]; ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=97.1, Expect=6e-23]; ENSMUSG00000057440, Mpp7, membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), [Score=96.3, Expect=1e-22]} {Dmel: FBgn0261873, sdt, stardust, [Score=103, Expect=4e-25]} {Celegans: WBGene00002991, lin-2, [Score=98.2, Expect=1e-23]} {Smed: dd_Smed_v6_4689_0_1, dd_Smed_v6_4689_0_1, [Score=101, Expect=1e-24]} {RNA1509_14422} {RNA1310_16841} {RNA815_8152}

Cumulative graph for MligTC455_08878

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.013	4.635	0.12170	0.71541
RegionR2	0.56	4.635	0.29843	0.68708
RegionR3	1.047	4.635	0.01757	0.21843
RegionR4	0.865	4.635	0.10846	0.32469
RegionR5	0.545	4.635	0.22485	0.52866
RegionR6	0.78	4.635	0.08776	0.54559
RegionR7	0.208	4.635	0.71219	1.00000
RegionR8	-1.991	4.635	0.03255	0.35372

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.961	4.635	0.19272	0.93143
RegenerationR2	0.416	4.635	0.36809	0.79418
RegenerationR3	0.041	4.635	0.93445	1.00000
RegenerationR4	0.74	4.635	0.14826	0.57556
RegenerationR5	0.552	4.635	0.24875	0.68251
RegenerationR6	0.501	4.635	0.31720	0.66449
RegenerationBL	0.964	4.635	0.08950	0.35059
RegenerationTP	0.921	4.635	0.18846	0.62642

Genes with expression patterns similar to MligTC455_08878

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08878	1102	22.96	Mlig455_066779	Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.617	MPP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_066779 {REF} {Length: 1701} {Pfam: Guanylate kinase [PF00625.23, score=75.6]} {Human: ENSG00000161647, MPP3, membrane palmitoylated protein 3, [Score=99.4, Expect=2e-23]; ENSG00000108852, MPP2, membrane palmitoylated protein 2, [Score=95.9, Expect=1e-22]} {Mouse: ENSMUSG00000052373, Mpp3, membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3), [Score=98.2, Expect=3e-23]; ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=97.1, Expect=6e-23]; ENSMUSG00000057440, Mpp7, membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), [Score=96.3, Expect=1e-22]} {Dmel: FBgn0261873, sdt, stardust, [Score=103, Expect=4e-25]} {Celegans: WBGene00002991, lin-2, [Score=98.2, Expect=1e-23]} {Smed: dd_Smed_v6_4689_0_1, dd_Smed_v6_4689_0_1, [Score=101, Expect=1e-24]} {RNA1509_14422} {RNA1310_16841} {RNA815_8152}
2.	MligTC455_08877	1080	22.49	Mlig455_064594	Neo: - Age: Down-Down-Up	MPP5	5.798	0.974	0.928	0.970	0.996	0.958	0.972	Mlig455_064594 {REF} {Length: 2355} {Pfam: Guanylate kinase [PF00625.23, score=73.1]; SH3 domain [PF00018.30, score=36.9]; Variant SH3 domain [PF07653.19, score=30.3]; PDZ domain [PF00595.26, score=26.9]; Variant SH3 domain [PF14604.8, score=21.0]; PDZ domain [PF17820.3, score=20.7]} {Human: ENSG00000072415, MPP5, membrane palmitoylated protein 5, [Score=180, Expect=9e-50]} {Mouse: ENSMUSG00000021112, Mpp5, membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), [Score=179, Expect=2e-49]} {Dmel: FBgn0050021, metro, menage a trois, [Score=154, Expect=2e-41]} {Celegans: WBGene00002991, lin-2, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_7957_0_1, dd_Smed_v6_7957_0_1, [Score=140, Expect=1e-36]} {RNA1509_14422, RNA1509_32149} {RNA1310_16841, RNA1509_14422, RNA1509_32149} {RNA1509_14422, RNA1509_32149, RNA815_8152}
3.	MligTC455_14644	635	13.24	Mlig455_012900	Neo: - Age: Down-Up-Up		0.972	-	-	-	0.972	-	-	Mlig455_012900 {REF} {Length: 1782} {RNA1509_19289} {RNA1310_21113.1} {RNA815_40513}
4.	MligTC455_52471	566	11.79	Mlig455_048007	Neo: - Age: logFC(26M/2M)=-0.372		0.96	-	-	-	0.960	-	-	Mlig455_048007 {REF} {Length: 1197} {Pfam: Toxic anion resistance protein (TelA) [PF05816.13, score=18.2]} {RNA1509_22693} {RNA1310_30859, RNA1509_22693} {RNA1509_22693, RNA815_19803}
5.	MligTC455_36149	237	4.93	Mlig455_067291	Neo: - Age: Down-Down-Up		0.958	-	-	-	0.958	-	-	Mlig455_067291 {REF} {Length: 4084} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552}
6.	MligTC455_33387	27	0.57	Mlig455_023913, Mlig455_046500, Mlig455_057016	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.607		0.955	-	-	-	-	0.955	-	Mlig455_023913 {REF} {Length: 4194} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.4]} {Smed: dd_Smed_v6_11577_0_1, dd_Smed_v6_11577_0_1, [Score=73.2, Expect=8e-14]} {RNA1310_77478} {RNA815_28021} Mlig455_046500 {REF} {Length: 1944} {RNA1310_77478} {RNA815_28021} Mlig455_057016 {REF} {Length: 2231} {RNA1310_25610.1}
7.	MligTC455_34927	451	9.4	Mlig455_049016	Neo: - Age: logFC(26M/2M)=-0.304		0.955	-	-	-	-	0.955	-	Mlig455_049016 {REF} {Length: 1741} {RNA1509_22221} {RNA1310_17396.1, RNA1509_22221} {RNA1509_22221, RNA815_24978}
8.	MligTC455_20050	973	20.26	Mlig455_065833	Neo: - Age: - Region-enriched R4: 1.188/0.00583 Region-enriched R5: 1.083/0.00271	RMDN1	0.954	-	-	-	0.954	-	-	Mlig455_065833 {REF} {Length: 1101} {Pfam: Tetratricopeptide repeat [PF14559.8, score=26.9]; Tetratricopeptide repeat [PF13431.8, score=24.2]; Tetratricopeptide repeat [PF07719.19, score=22.1]; Tetratricopeptide repeat [PF13181.8, score=22.1]; Tetratricopeptide repeat [PF13428.8, score=21.8]; TPR repeat [PF13414.8, score=18.9]; Tetratricopeptide repeat [PF00515.30, score=18.7]} {Human: ENSG00000176623, RMDN1, regulator of microtubule dynamics 1, [RH, Score=202, Expect=2e-62]} {Mouse: ENSMUSG00000028229, Rmdn1, regulator of microtubule dynamics 1, [RH, Score=206, Expect=3e-64]} {Celegans: WBGene00009369, F33H2.6, [Score=151, Expect=1e-43]} {Smed: dd_Smed_v6_502_0_1, dd_Smed_v6_502_0_1, [Score=215, Expect=3e-69]} {RNA1509_42854} {RNA1310_19566.1} {RNA815_10877}
9.	MligTC455_44568	1898	39.55	Mlig455_050282, Mlig455_050288	Neo: - Age: Down-Down-Up		0.95	-	-	-	0.950	-	-	Mlig455_050282 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_38103} {RNA1310_23365} {RNA815_10680} Mlig455_050288 {REF} {Length: 1371} {TRANSSPLICED} {RNA1509_38103, RNA1509_40424, RNA1509_41423} {RNA1310_23365, RNA1509_38103, RNA1509_40424, RNA1509_41423} {RNA1509_38103, RNA1509_40424, RNA1509_41423, RNA815_10680}

Berezikov Lab - 2020-2021 © ERIBA