M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_08899

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08899 12 0.26 Mlig455_000368

Neo: -

Age: -

 Mlig455_000368 {REF} {Length: 1034} {NoTransDecoderORF} {RNA1310_134299}

Cumulative graph for MligTC455_08899

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.296 0.539 1.00000 1.00000
RegionR2 0.567 0.539 1.00000 1.00000
RegionR3 -0.274 0.539 1.00000 1.00000
RegionR4 -1.012 0.539 1.00000 1.00000
RegionR5 -0.794 0.539 0.99985 1.00000
RegionR6 -0.488 0.539 1.00000 1.00000
RegionR7 0.577 0.539 0.99982 1.00000
RegionR8 1.125 0.539 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.525 0.539 1.00000 1.00000
RegenerationR2 1.439 0.539 1.00000 1.00000
RegenerationR3 -0.106 0.539 0.99989 1.00000
RegenerationR4 -0.004 0.539 0.99993 1.00000
RegenerationR5 -0.026 0.539 0.99993 1.00000
RegenerationR6 1.981 0.539 1.00000 1.00000
RegenerationBL 3.337 0.539 1.00000 1.00000
RegenerationTP -0.59 0.539 0.99982 1.00000


Genes with expression patterns similar to MligTC455_08899

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08899 12 0.26 Mlig455_000368

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_000368 {REF} {Length: 1034} {NoTransDecoderORF} {RNA1310_134299}
2. MligTC455_33443 29 0.61 Mlig455_018241, Mlig455_020027, Mlig455_052956

Neo: -

Age: -

 0.999 - - - - 0.999 -

Mlig455_018241 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}

Mlig455_020027 {REF} {Length: 1060} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}

Mlig455_052956 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}
3. MligTC455_10297 15 0.32 Mlig455_015788

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_015788 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_25850} {RNA1310_7880} {RNA815_2645}
4. MligTC455_05769 56 1.17 Mlig455_063285

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_063285 {REF} {Length: 1011} {Pfam: zinc-finger C2H2-type [PF16622.7, score=27.9]; Protein of unknown function (DUF562) [PF04763.14, score=21.2]} {RNA1509_33737} {RNA1310_41122}
5. MligTC455_17475 56 1.16 Mlig455_065300, Mlig455_065322

Neo: -

Age: -

 MYT1L 0.985 - - - - 0.985 -

Mlig455_065300 {REF} {Length: 3149} {Pfam: Zinc finger, C2HC type [PF01530.20, score=77.6]} {Human: ENSG00000186487, MYT1L, myelin transcription factor 1 like, [RH, Score=130, Expect=2e-33]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=126, Expect=1e-29]; ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=126, Expect=1e-29]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=126, Expect=3e-30]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=125, Expect=1e-29]} {Mouse: ENSMUSG00000061911, Myt1l, myelin transcription factor 1-like, [RH, Score=129, Expect=6e-31]; ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=125, Expect=7e-30]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=125, Expect=1e-29]} {Dmel: FBgn0263772, CG43689, [Score=87.4, Expect=1e-17]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [RH, Score=123, Expect=1e-29]} {Smed: dd_Smed_v6_80183_0_1, dd_Smed_v6_80183_0_1, [RH, Score=132, Expect=7e-35]} {RNA1310_120779}

Mlig455_065322 {REF} {Length: 1854} {Pfam: Zinc finger, C2HC type [PF01530.20, score=74.9]} {Human: ENSG00000186487, MYT1L, myelin transcription factor 1 like, [RH, Score=129, Expect=1e-31]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=126, Expect=3e-30]; ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=125, Expect=8e-30]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=125, Expect=8e-30]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=125, Expect=9e-30]} {Mouse: ENSMUSG00000061911, Myt1l, myelin transcription factor 1-like, [RH, Score=128, Expect=7e-31]; ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=125, Expect=6e-30]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=124, Expect=1e-29]} {Dmel: FBgn0263772, CG43689, [Score=87.0, Expect=1e-17]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [RH, Score=124, Expect=2e-30]} {Smed: dd_Smed_v6_80183_0_1, dd_Smed_v6_80183_0_1, [RH, Score=133, Expect=3e-35]} {RNA1310_120779}
6. MligTC455_08185 626 13.04 Mlig455_054705

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.216

Regeneration-downregulated TP: -3.161

Regeneration-depleted TP: -3.161

 0.98 - - - - 0.980 - Mlig455_054705 {REF} {Length: 3519} {Pfam: Immunoglobulin domain [PF13927.8, score=34.9]; Immunoglobulin I-set domain [PF07679.18, score=31.1]; Immunoglobulin domain [PF00047.27, score=19.9]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=49.7, Expect=1e-05]} {RNA1509_36313} {RNA1310_3850.1, RNA1509_36313} {RNA1509_36313, RNA815_412}
7. MligTC455_40913 85 1.77 Mlig455_067935

Neo: -

Age: -

Regeneration-upregulated BL: 9.167

Regeneration-enriched BL: 9.167

 ASCL5 0.979 - - - - 0.979 - Mlig455_067935 {REF} {Length: 1417} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=44.2]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=48.1, Expect=4e-06]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [Score=47.0, Expect=7e-06]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=48.5, Expect=2e-06]} {Dmel: FBgn0004170, sc, scute, [Score=55.1, Expect=2e-08]} {Celegans: WBGene00001950, hlh-3, Helix-loop-helix protein 3, [Score=47.0, Expect=3e-06]}
8. MligTC455_31300 41 0.85 Mlig455_030074, Mlig455_031046

Neo: -

Age: -

 0.976 - - - - 0.976 -

Mlig455_030074 {REF} {Length: 927} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=43.1, Expect=1e-05]} {RNA1509_59044} {RNA1310_32321} {RNA815_63485}

Mlig455_031046 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.0]} {RNA1509_49623} {RNA1310_32321} {RNA815_63485}
9. MligTC455_18449 27 0.56 Mlig455_027387

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_027387 {REF} {Length: 1499} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]}
10. MligTC455_15608 37 0.77 Mlig455_065097

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_065097 {REF} {Length: 714} {NoTransDecoderORF} {RNA1509_54815} {RNA1310_122782} {RNA815_2261.1}
11. MligTC455_20468 65 1.35 Mlig455_024540, Mlig455_024576

Neo: -

Age: -

 POU4F1, POU4F2 0.97 - - - - 0.970 -

Mlig455_024540 {REF} {Length: 3020} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.9]; Homeodomain [PF00046.31, score=68.2]; Helix-turn-helix domain [PF13560.8, score=19.9]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=4e-86]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=270, Expect=2e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=264, Expect=6e-85]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=2e-86]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=269, Expect=4e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=264, Expect=4e-85]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=259, Expect=1e-82]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=239, Expect=4e-76]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=308, Expect=3e-102]} {RNA1509_57422} {RNA1310_14116, RNA1509_57422} {RNA1509_57422, RNA815_35899}

Mlig455_024576 {REF} {Length: 2574} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.5]; Homeodomain [PF00046.31, score=67.5]} {Human: ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=271, Expect=3e-85]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=1e-84]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=265, Expect=1e-83]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=3e-85]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=270, Expect=9e-85]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=265, Expect=7e-84]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=241, Expect=1e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=310, Expect=3e-101]} {RNA1509_57422} {RNA1310_14116} {RNA815_35899}
12. MligTC455_01530 8 0.17 Mlig455_038775

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_038775 {REF} {Length: 380} {NoTransDecoderORF}
13. MligTC455_10251 25 0.51 Mlig455_002552

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_002552 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_11657} {RNA1310_5276.1} {RNA815_27122}
14. MligTC455_23683 27 0.57 Mlig455_011179

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_011179 {REF} {Length: 1187} {NoTransDecoderORF} {RNA1509_56561} {RNA1310_4540} {RNA815_23588}
15. MligTC455_18821 223 4.64 Mlig455_042125

Neo: -

Age: -

Region-enriched R8: 8.011/0.00034

 WNT1 0.961 - - - - 0.961 - Mlig455_042125 {REF} {Length: 2758} {Pfam: wnt family [PF00110.21, score=265.1]} {Human: ENSG00000125084, WNT1, Wnt family member 1, [Score=180, Expect=1e-51]; ENSG00000105989, WNT2, Wnt family member 2, [Score=178, Expect=3e-51]; ENSG00000002745, WNT16, Wnt family member 16, [Score=172, Expect=6e-49]; ENSG00000154764, WNT7A, Wnt family member 7A, [Score=172, Expect=8e-49]} {Mouse: ENSMUSG00000022997, Wnt1, wingless-type MMTV integration site family, member 1, [Score=180, Expect=7e-52]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=176, Expect=1e-50]; ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=175, Expect=3e-50]; ENSMUSG00000030093, Wnt7a, wingless-type MMTV integration site family, member 7A, [Score=172, Expect=5e-49]} {Dmel: FBgn0004360, Wnt2, Wnt oncogene analog 2, [Score=145, Expect=2e-39]} {Celegans: WBGene00000858, cwn-2, [Score=159, Expect=2e-44]} {Smed: dd_Smed_v6_28398_0_1, dd_Smed_v6_28398_0_1, [RH, Score=227, Expect=9e-70]} {RNA1509_55690} {RNA1310_28464, RNA1509_55690} {RNA1509_55690, RNA815_12843}
16. MligTC455_46807 683 14.23 Mlig455_058198

Neo: -

Age: -

Regeneration-upregulated BL: 2.053

Regeneration-enriched BL: 2.053

 SYT2 0.961 - - - - 0.961 - Mlig455_058198 {REF} {Length: 2142} {Pfam: C2 domain [PF00168.32, score=85.3]; Interleukin 7 [PF01415.18, score=19.8]; Malarial early transcribed membrane protein (ETRAMP) [PF09716.12, score=19.3]; Predicted membrane protein (DUF2207) [PF09972.11, score=19.2]; Wnt and FGF inhibitory regulator [PF13908.8, score=19.1]} {Human: ENSG00000143858, SYT2, synaptotagmin 2, [Score=105, Expect=7e-24]; ENSG00000067715, SYT1, synaptotagmin 1, [Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=105, Expect=6e-24]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=101, Expect=1e-22]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=124, Expect=2e-30]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=113, Expect=7e-27]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=108, Expect=2e-25]} {RNA1509_10353} {RNA1310_13098} {RNA815_6579}
17. MligTC455_13795 10 0.22 Mlig455_049344

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_049344 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_71916}
18. MligTC455_16815 51 1.07 Mlig455_038730

Neo: -

Age: -

 KCNC1 0.959 - - - - 0.959 - Mlig455_038730 {REF} {Length: 3802} {Pfam: Ion transport protein [PF00520.33, score=148.9]; BTB/POZ domain [PF02214.24, score=99.7]; Ion channel [PF07885.18, score=45.1]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=425, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=425, Expect=2e-141]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=404, Expect=7e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=425, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=2e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=697, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=686, Expect=0.0]} {RNA1310_23163} {RNA815_9933.1}
19. MligTC455_27472 133 2.77 Mlig455_009912

Neo: -

Age: logFC(26M/2M)=-0.500

Region-enriched R8: 4.558/0.00009
Region-enriched R7: 2.820/0.04918

 ANK1 0.958 - - - - 0.958 - Mlig455_009912 {REF} {Length: 4603} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=223.1]; Ankyrin repeat [PF00023.32, score=210.6]; Ankyrin repeats (many copies) [PF13637.8, score=152.3]; Ankyrin repeat [PF13606.8, score=151.1]; Ankyrin repeats (many copies) [PF13857.8, score=122.9]; Glutamine amidotransferase domain [PF13537.8, score=29.6]; Mab-21 protein [PF03281.16, score=29.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=194, Expect=1e-49]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=183, Expect=2e-46]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=181, Expect=9e-46]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=177, Expect=2e-44]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=171, Expect=1e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=177, Expect=1e-44]} {Smed: dd_Smed_v6_2072_0_4, dd_Smed_v6_2072_0_4, [Score=187, Expect=5e-48]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
20. MligTC455_07107 177 3.68 Mlig455_037410

Neo: -

Age: -

Region-enriched R8: 7.446/0.00923

 0.956 - - - - 0.956 - Mlig455_037410 {REF} {Length: 2565} {RNA1509_34967} {RNA1310_16201, RNA1509_34967} {RNA1509_34967, RNA815_28129}
21. MligTC455_12036 9 0.19 Mlig455_026886

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_026886 {REF} {Length: 1284} {NoTransDecoderORF} {RNA1310_143140}
22. MligTC455_51050 155 3.22 Mlig455_010441

Neo: -

Age: -

 PKD2 0.956 - - - - 0.956 - Mlig455_010441 {REF} {Length: 3821} {Pfam: Polycystin cation channel [PF08016.14, score=402.9]; Ion transport protein [PF00520.33, score=69.5]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=553, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [Score=553, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=268, Expect=4e-77]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=278, Expect=3e-82]} {Smed: dd_Smed_v6_9977_0_1, dd_Smed_v6_9977_0_1, [Score=497, Expect=4e-165]} {RNA1509_39669} {RNA1310_38119.1, RNA1509_39669} {RNA1509_39669, RNA815_9047}
23. MligTC455_44468 517 10.76 Mlig455_060290, Mlig455_066805, Mlig455_066871

Neo: -

Age: logFC(26M/2M)=0.308

 0.953 - - - - 0.953 -

Mlig455_060290 {REF} {Length: 2085} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}

Mlig455_066805 {REF} {Length: 2535} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}

Mlig455_066871 {REF} {Length: 1837} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}
24. MligTC455_20956 77 1.6 Mlig455_008761

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.712/0.03504

 GLRA3 0.952 - - - - 0.952 - Mlig455_008761 {REF} {Length: 3739} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=146.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=124.8]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=344, Expect=7e-114]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=2e-111]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=5e-113]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=336, Expect=7e-111]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=291, Expect=2e-93]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=256, Expect=7e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=253, Expect=1e-78]} {RNA1310_38552.1} {RNA815_6481}
25. MligTC455_01752 25 0.51 Mlig455_000951

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_000951 {REF} {Length: 1210} {NoTransDecoderORF}
26. MligTC455_24052 272 5.66 Mlig455_065284, Mlig455_065290

Neo: -

Age: Down-Up-Down

 0.951 - - - - 0.951 -

Mlig455_065284 {REF} {Length: 1698} {RNA1509_34738} {RNA1310_59354} {RNA815_53074}

Mlig455_065290 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: EamA-like transporter family [PF00892.22, score=24.1]} {RNA1509_34738} {RNA1310_59354} {RNA815_26334}
27. MligTC455_06821 8 0.17 Mlig455_032088

Neo: -

Age: -

 CAPN8 0.95 - - - - 0.950 - Mlig455_032088 {REF} {Length: 3116} {Pfam: Calpain family cysteine protease [PF00648.23, score=284.3]; Calpain large subunit, domain III [PF01067.24, score=32.7]} {Human: ENSG00000203697, CAPN8, calpain 8, [Score=233, Expect=1e-68]; ENSG00000135773, CAPN9, calpain 9, [Score=229, Expect=2e-67]; ENSG00000137225, CAPN11, calpain 11, [Score=229, Expect=2e-67]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=238, Expect=6e-71]; ENSMUSG00000038599, Capn8, calpain 8, [Score=230, Expect=6e-68]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=225, Expect=2e-67]} {Celegans: WBGene00000546, clp-6, CaLPain family, [Score=216, Expect=1e-63]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=225, Expect=7e-66]} {RNA1509_52904} {RNA1310_59215} {RNA815_23274}
28. MligTC455_16909 19 0.4 Mlig455_011094

Neo: -

Age: Up-Down-Down

 0.95 - - - - 0.950 - Mlig455_011094 {REF} {Length: 2594} {NoTransDecoderORF} {RNA1509_11508, RNA1509_49613} {RNA1310_3130.1, RNA1509_49613} {RNA1509_49613, RNA815_11751}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA