M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_31300

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31300 41 0.85 Mlig455_030074, Mlig455_031046

Neo: -

Age: -

Mlig455_030074 {REF} {Length: 927} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=43.1, Expect=1e-05]} {RNA1509_59044} {RNA1310_32321} {RNA815_63485}

Mlig455_031046 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.0]} {RNA1509_49623} {RNA1310_32321} {RNA815_63485}

Cumulative graph for MligTC455_31300

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.23 1.117 0.99957 1.00000
RegionR2 -0.11 1.117 0.99966 1.00000
RegionR3 0.76 1.117 0.45672 0.96759
RegionR4 0.803 1.117 0.42809 0.75640
RegionR5 1.392 1.117 0.25368 0.57107
RegionR6 -0.99 1.117 0.99962 1.00000
RegionR7 2.656 1.117 0.15819 0.73473
RegionR8 -1.283 1.117 0.99970 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.325 1.117 0.99995 1.00000
RegenerationR2 3.584 1.117 0.05952 0.40085
RegenerationR3 2.718 1.117 0.21183 0.64785
RegenerationR4 2.085 1.117 0.35729 0.78621
RegenerationR5 1.008 1.117 0.53173 0.87586
RegenerationR6 4.483 1.117 0.05060 0.28134
RegenerationBL 5.38 1.117 0.00662 0.07898
RegenerationTP -1.179 1.117 0.99985 1.00000


Genes with expression patterns similar to MligTC455_31300

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31300 41 0.85 Mlig455_030074, Mlig455_031046

Neo: -

Age: -

 4 - 1.000 - 1.000 1.000 1.000

Mlig455_030074 {REF} {Length: 927} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=43.1, Expect=1e-05]} {RNA1509_59044} {RNA1310_32321} {RNA815_63485}

Mlig455_031046 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.0]} {RNA1509_49623} {RNA1310_32321} {RNA815_63485}
2. MligTC455_09342 23 0.49 Mlig455_033405, Mlig455_040187

Neo: -

Age: -

 FLOT1 1.736 - - - - 0.776 0.960

Mlig455_033405 {REF} {Length: 1360} {TRANSSPLICED} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=70.4]; Flotillin [PF15975.7, score=24.5]} {Human: ENSG00000232280, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206379, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000137312, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206480, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000230143, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [RH, Score=586, Expect=0.0]} {Smed: dd_Smed_v6_1637_0_1, dd_Smed_v6_1637_0_1, [RH, Score=611, Expect=0.0]} {RNA1509_2494} {RNA1310_17807.1} {RNA815_7706.1}

Mlig455_040187 {REF} {Length: 1521} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=70.4]; Flotillin [PF15975.7, score=24.5]} {Human: ENSG00000232280, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206379, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000137312, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000206480, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]; ENSG00000230143, FLOT1, flotillin 1, [RH, Score=566, Expect=0.0]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [RH, Score=586, Expect=0.0]} {Smed: dd_Smed_v6_1637_0_1, dd_Smed_v6_1637_0_1, [RH, Score=611, Expect=0.0]} {RNA1509_2494} {RNA1310_17807.1} {RNA815_7706.1}
3. MligTC455_40913 85 1.77 Mlig455_067935

Neo: -

Age: -

Regeneration-upregulated BL: 9.167

Regeneration-enriched BL: 9.167

 ASCL5 1.717 - - - 0.749 0.968 - Mlig455_067935 {REF} {Length: 1417} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=44.2]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=48.1, Expect=4e-06]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [Score=47.0, Expect=7e-06]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=48.5, Expect=2e-06]} {Dmel: FBgn0004170, sc, scute, [Score=55.1, Expect=2e-08]} {Celegans: WBGene00001950, hlh-3, Helix-loop-helix protein 3, [Score=47.0, Expect=3e-06]}
4. MligTC455_18821 223 4.64 Mlig455_042125

Neo: -

Age: -

Region-enriched R8: 8.011/0.00034

 WNT1 1.662 - - - 0.708 0.954 - Mlig455_042125 {REF} {Length: 2758} {Pfam: wnt family [PF00110.21, score=265.1]} {Human: ENSG00000125084, WNT1, Wnt family member 1, [Score=180, Expect=1e-51]; ENSG00000105989, WNT2, Wnt family member 2, [Score=178, Expect=3e-51]; ENSG00000002745, WNT16, Wnt family member 16, [Score=172, Expect=6e-49]; ENSG00000154764, WNT7A, Wnt family member 7A, [Score=172, Expect=8e-49]} {Mouse: ENSMUSG00000022997, Wnt1, wingless-type MMTV integration site family, member 1, [Score=180, Expect=7e-52]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=176, Expect=1e-50]; ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=175, Expect=3e-50]; ENSMUSG00000030093, Wnt7a, wingless-type MMTV integration site family, member 7A, [Score=172, Expect=5e-49]} {Dmel: FBgn0004360, Wnt2, Wnt oncogene analog 2, [Score=145, Expect=2e-39]} {Celegans: WBGene00000858, cwn-2, [Score=159, Expect=2e-44]} {Smed: dd_Smed_v6_28398_0_1, dd_Smed_v6_28398_0_1, [RH, Score=227, Expect=9e-70]} {RNA1509_55690} {RNA1310_28464, RNA1509_55690} {RNA1509_55690, RNA815_12843}
5. MligTC455_18449 27 0.56 Mlig455_027387

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_027387 {REF} {Length: 1499} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]}
6. MligTC455_10251 25 0.51 Mlig455_002552

Neo: -

Age: -

 0.98 - - - - 0.980 - Mlig455_002552 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_11657} {RNA1310_5276.1} {RNA815_27122}
7. MligTC455_15608 37 0.77 Mlig455_065097

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_065097 {REF} {Length: 714} {NoTransDecoderORF} {RNA1509_54815} {RNA1310_122782} {RNA815_2261.1}
8. MligTC455_39533 45 0.93 Mlig455_032576

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_032576 {REF} {Length: 818} {RNA1310_132896}
9. MligTC455_08899 12 0.26 Mlig455_000368

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_000368 {REF} {Length: 1034} {NoTransDecoderORF} {RNA1310_134299}
10. MligTC455_01530 8 0.17 Mlig455_038775

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_038775 {REF} {Length: 380} {NoTransDecoderORF}
11. MligTC455_33443 29 0.61 Mlig455_018241, Mlig455_020027, Mlig455_052956

Neo: -

Age: -

 0.975 - - - - 0.975 -

Mlig455_018241 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}

Mlig455_020027 {REF} {Length: 1060} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}

Mlig455_052956 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}
12. MligTC455_17475 56 1.16 Mlig455_065300, Mlig455_065322

Neo: -

Age: -

 MYT1L 0.973 - - - - 0.973 -

Mlig455_065300 {REF} {Length: 3149} {Pfam: Zinc finger, C2HC type [PF01530.20, score=77.6]} {Human: ENSG00000186487, MYT1L, myelin transcription factor 1 like, [RH, Score=130, Expect=2e-33]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=126, Expect=1e-29]; ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=126, Expect=1e-29]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=126, Expect=3e-30]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=125, Expect=1e-29]} {Mouse: ENSMUSG00000061911, Myt1l, myelin transcription factor 1-like, [RH, Score=129, Expect=6e-31]; ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=125, Expect=7e-30]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=125, Expect=1e-29]} {Dmel: FBgn0263772, CG43689, [Score=87.4, Expect=1e-17]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [RH, Score=123, Expect=1e-29]} {Smed: dd_Smed_v6_80183_0_1, dd_Smed_v6_80183_0_1, [RH, Score=132, Expect=7e-35]} {RNA1310_120779}

Mlig455_065322 {REF} {Length: 1854} {Pfam: Zinc finger, C2HC type [PF01530.20, score=74.9]} {Human: ENSG00000186487, MYT1L, myelin transcription factor 1 like, [RH, Score=129, Expect=1e-31]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=126, Expect=3e-30]; ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=125, Expect=8e-30]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=125, Expect=8e-30]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=125, Expect=9e-30]} {Mouse: ENSMUSG00000061911, Myt1l, myelin transcription factor 1-like, [RH, Score=128, Expect=7e-31]; ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=125, Expect=6e-30]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=124, Expect=1e-29]} {Dmel: FBgn0263772, CG43689, [Score=87.0, Expect=1e-17]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [RH, Score=124, Expect=2e-30]} {Smed: dd_Smed_v6_80183_0_1, dd_Smed_v6_80183_0_1, [RH, Score=133, Expect=3e-35]} {RNA1310_120779}
13. MligTC455_08185 626 13.04 Mlig455_054705

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.216

Regeneration-downregulated TP: -3.161

Regeneration-depleted TP: -3.161

 0.97 - - - - 0.970 - Mlig455_054705 {REF} {Length: 3519} {Pfam: Immunoglobulin domain [PF13927.8, score=34.9]; Immunoglobulin I-set domain [PF07679.18, score=31.1]; Immunoglobulin domain [PF00047.27, score=19.9]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=49.7, Expect=1e-05]} {RNA1509_36313} {RNA1310_3850.1, RNA1509_36313} {RNA1509_36313, RNA815_412}
14. MligTC455_12789 109 2.26 Mlig455_043692, Mlig455_043761

Neo: -

Age: -

 0.969 - - - - 0.969 -

Mlig455_043692 {REF} {Length: 1226} {RNA1310_92548}

Mlig455_043761 {REF} {Length: 1216} {RNA1310_92548}
15. MligTC455_05769 56 1.17 Mlig455_063285

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_063285 {REF} {Length: 1011} {Pfam: zinc-finger C2H2-type [PF16622.7, score=27.9]; Protein of unknown function (DUF562) [PF04763.14, score=21.2]} {RNA1509_33737} {RNA1310_41122}
16. MligTC455_16534 25 0.51 Mlig455_012296

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_012296 {REF} {Length: 1525} {NoTransDecoderORF} {RNA1509_13560} {RNA1310_12906}
17. MligTC455_37171 172 3.58 Mlig455_010195

Neo: -

Age: -

 SH3D19 0.967 - - - 0.967 - - Mlig455_010195 {REF} {Length: 4229} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=92.6]; Variant SH3 domain [PF14604.8, score=91.9]; Variant SH3 domain [PF07653.19, score=54.8]} {Human: ENSG00000109686, SH3D19, SH3 domain containing 19, [Score=76.3, Expect=6e-14]} {Mouse: ENSMUSG00000028082, Sh3d19, SH3 domain protein D19, [Score=70.9, Expect=2e-12]} {Dmel: FBgn0033504, CAP, [Score=53.9, Expect=3e-07]} {Celegans: WBGene00012891, sorb-1, SORBin homolog, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_1221_0_1, dd_Smed_v6_1221_0_1, [Score=61.6, Expect=6e-10]} {RNA1509_52827} {RNA1310_4699.1} {RNA815_20723}
18. MligTC455_23683 27 0.57 Mlig455_011179

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_011179 {REF} {Length: 1187} {NoTransDecoderORF} {RNA1509_56561} {RNA1310_4540} {RNA815_23588}
19. MligTC455_10297 15 0.32 Mlig455_015788

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_015788 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_25850} {RNA1310_7880} {RNA815_2645}
20. MligTC455_16815 51 1.07 Mlig455_038730

Neo: -

Age: -

 KCNC1 0.957 - - - - 0.957 - Mlig455_038730 {REF} {Length: 3802} {Pfam: Ion transport protein [PF00520.33, score=148.9]; BTB/POZ domain [PF02214.24, score=99.7]; Ion channel [PF07885.18, score=45.1]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=425, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=425, Expect=2e-141]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=404, Expect=7e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=425, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=2e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=697, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=686, Expect=0.0]} {RNA1310_23163} {RNA815_9933.1}
21. MligTC455_45041 96 2 Mlig455_015334

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.860/0.02299

 FANCI 0.956 - - - 0.956 - - Mlig455_015334 {REF} {Length: 6061} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=67.6]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=170, Expect=7e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043} {RNA1310_3141} {RNA815_12076}
22. MligTC455_45818 312 6.51 Mlig455_009757, Mlig455_070114

Neo: -

Age: -

 SCML2 0.956 - - - - 0.956 -

Mlig455_009757 {REF} {Length: 2536} {Pfam: mbt repeat [PF02820.20, score=136.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=264, Expect=2e-80]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [RH, Score=258, Expect=3e-77]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=242, Expect=2e-71]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=4e-19]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=176, Expect=4e-49]} {RNA1509_29967} {RNA1310_17057.1, RNA1509_29967} {RNA1509_29967, RNA815_24997}

Mlig455_070114 {REF} {Length: 4024} {Pfam: mbt repeat [PF02820.20, score=138.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=266, Expect=3e-81]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [RH, Score=257, Expect=4e-77]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=244, Expect=5e-72]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.0, Expect=9e-20]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=177, Expect=9e-50]} {RNA1509_29967} {RNA1310_17057.1} {RNA815_24997}
23. MligTC455_07107 177 3.68 Mlig455_037410

Neo: -

Age: -

Region-enriched R8: 7.446/0.00923

 0.953 - - - - 0.953 - Mlig455_037410 {REF} {Length: 2565} {RNA1509_34967} {RNA1310_16201, RNA1509_34967} {RNA1509_34967, RNA815_28129}
24. MligTC455_20468 65 1.35 Mlig455_024540, Mlig455_024576

Neo: -

Age: -

 POU4F1, POU4F2 0.953 - - - - 0.953 -

Mlig455_024540 {REF} {Length: 3020} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.9]; Homeodomain [PF00046.31, score=68.2]; Helix-turn-helix domain [PF13560.8, score=19.9]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=4e-86]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=270, Expect=2e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=264, Expect=6e-85]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=2e-86]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=269, Expect=4e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=264, Expect=4e-85]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=259, Expect=1e-82]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=239, Expect=4e-76]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=308, Expect=3e-102]} {RNA1509_57422} {RNA1310_14116, RNA1509_57422} {RNA1509_57422, RNA815_35899}

Mlig455_024576 {REF} {Length: 2574} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.5]; Homeodomain [PF00046.31, score=67.5]} {Human: ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=271, Expect=3e-85]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=1e-84]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=265, Expect=1e-83]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=3e-85]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=270, Expect=9e-85]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=265, Expect=7e-84]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=241, Expect=1e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=310, Expect=3e-101]} {RNA1509_57422} {RNA1310_14116} {RNA815_35899}
25. MligTC455_19096 120 2.51 Mlig455_034495, Mlig455_066247

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.298

Region-enriched R4: 4.299/0.00004

 0.952 - - - 0.952 - -

Mlig455_034495 {REF} {Length: 2182} {NoTransDecoderORF} {RNA1509_28602} {RNA1310_14384, RNA1509_28602} {RNA1509_28602, RNA815_9416}

Mlig455_066247 {REF} {Length: 3738} {RNA1509_28602} {RNA1310_14384} {RNA815_9416}
26. MligTC455_40711 24 0.5 Mlig455_065476

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_065476 {REF} {Length: 1365}
27. MligTC455_44468 517 10.76 Mlig455_060290, Mlig455_066805, Mlig455_066871

Neo: -

Age: logFC(26M/2M)=0.308

 0.951 - - - - 0.951 -

Mlig455_060290 {REF} {Length: 2085} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}

Mlig455_066805 {REF} {Length: 2535} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}

Mlig455_066871 {REF} {Length: 1837} {TRANSSPLICED} {RNA1509_55004} {RNA1310_35134.1} {RNA815_42855}
28. MligTC455_13742 20 0.41 Mlig455_046522

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_046522 {REF} {Length: 1336} {RNA1310_97283}
29. MligTC455_40363 13 0.28 Mlig455_000782

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_000782 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=30.6]} {Mouse: ENSMUSG00000089753, Cd300ld2, CD300 molecule like family member D2, [Score=42.7, Expect=9e-06]} {RNA1310_103775}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA