TomoSeq data search

Data search

Results for MligTC455_08913

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08913

11

0.23

Mlig455_010158, Mlig455_010225

Neo: -

Age: -

KCNN1

Mlig455_010158 {REF} {Length: 2236} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=124.1]; Calmodulin binding domain [PF02888.18, score=76.7]; Ion channel [PF07885.18, score=53.1]} {Human: ENSG00000105642, KCNN1, potassium calcium-activated channel subfamily N member 1, [Score=384, Expect=2e-128]; ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [Score=378, Expect=1e-125]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [Score=374, Expect=3e-122]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [Score=378, Expect=8e-126]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [Score=372, Expect=1e-121]; ENSMUSG00000111706, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]; ENSMUSG00000002908, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [Score=390, Expect=3e-131]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [Score=318, Expect=3e-102]} {Smed: dd_Smed_v6_13309_0_1, dd_Smed_v6_13309_0_1, [Score=451, Expect=4e-156]} {RNA1310_35938} {RNA815_50883}

Mlig455_010225 {REF} {Length: 2486} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=124.1]; Calmodulin binding domain [PF02888.18, score=76.7]; Ion channel [PF07885.18, score=53.1]} {Human: ENSG00000105642, KCNN1, potassium calcium-activated channel subfamily N member 1, [Score=384, Expect=2e-128]; ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [Score=378, Expect=1e-125]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [Score=374, Expect=3e-122]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [Score=378, Expect=8e-126]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [Score=372, Expect=1e-121]; ENSMUSG00000111706, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]; ENSMUSG00000002908, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [Score=390, Expect=3e-131]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [Score=318, Expect=3e-102]} {Smed: dd_Smed_v6_13309_0_1, dd_Smed_v6_13309_0_1, [Score=451, Expect=4e-156]} {RNA1310_35938} {RNA815_50883}

Cumulative graph for MligTC455_08913

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.354	0.633	1.00000	1.00000
RegionR2	-0.603	0.633	1.00000	1.00000
RegionR3	-0.106	0.633	1.00000	1.00000
RegionR4	0.487	0.633	1.00000	1.00000
RegionR5	0.085	0.633	1.00000	1.00000
RegionR6	-0.199	0.633	1.00000	1.00000
RegionR7	-0.129	0.633	1.00000	1.00000
RegionR8	0.111	0.633	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.638	0.633	1.00000	1.00000
RegenerationR2	3.77	0.633	1.00000	1.00000
RegenerationR3	1.769	0.633	0.32846	0.75463
RegenerationR4	-0.702	0.633	0.99994	1.00000
RegenerationR5	-0.479	0.633	1.00000	1.00000
RegenerationR6	1.955	0.633	1.00000	1.00000
RegenerationBL	-0.491	0.633	1.00000	1.00000
RegenerationTP	-0.453	0.633	1.00000	1.00000

Genes with expression patterns similar to MligTC455_08913

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08913	11	0.23	Mlig455_010158, Mlig455_010225	Neo: - Age: -	KCNN1	1	-	-	-	1.000	-	-	Mlig455_010158 {REF} {Length: 2236} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=124.1]; Calmodulin binding domain [PF02888.18, score=76.7]; Ion channel [PF07885.18, score=53.1]} {Human: ENSG00000105642, KCNN1, potassium calcium-activated channel subfamily N member 1, [Score=384, Expect=2e-128]; ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [Score=378, Expect=1e-125]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [Score=374, Expect=3e-122]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [Score=378, Expect=8e-126]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [Score=372, Expect=1e-121]; ENSMUSG00000111706, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]; ENSMUSG00000002908, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [Score=390, Expect=3e-131]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [Score=318, Expect=3e-102]} {Smed: dd_Smed_v6_13309_0_1, dd_Smed_v6_13309_0_1, [Score=451, Expect=4e-156]} {RNA1310_35938} {RNA815_50883} Mlig455_010225 {REF} {Length: 2486} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=124.1]; Calmodulin binding domain [PF02888.18, score=76.7]; Ion channel [PF07885.18, score=53.1]} {Human: ENSG00000105642, KCNN1, potassium calcium-activated channel subfamily N member 1, [Score=384, Expect=2e-128]; ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [Score=378, Expect=1e-125]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [Score=374, Expect=3e-122]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [Score=378, Expect=8e-126]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [Score=372, Expect=1e-121]; ENSMUSG00000111706, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]; ENSMUSG00000002908, Kcnn1, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, [Score=369, Expect=1e-122]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [Score=390, Expect=3e-131]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [Score=318, Expect=3e-102]} {Smed: dd_Smed_v6_13309_0_1, dd_Smed_v6_13309_0_1, [Score=451, Expect=4e-156]} {RNA1310_35938} {RNA815_50883}
2.	MligTC455_40477	87	1.8	Mlig455_066098, Mlig455_068673	Neo: - Age: - Regeneration-downregulated R4: -4.243 Regeneration-depleted R4: -4.243	SSUH2	0.991	-	-	-	0.991	-	-	Mlig455_066098 {REF} {Length: 1581} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=104, Expect=3e-25]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=69.3, Expect=4e-13]} {RNA1310_23200} {RNA815_29266} Mlig455_068673 {REF} {Length: 1558} {Pfam: DnaJ central domain [PF00684.21, score=24.8]} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [RH, Score=216, Expect=8e-66]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=165, Expect=6e-47]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [RH, Score=140, Expect=2e-37]} {RNA1310_23200} {RNA815_29266}
3.	MligTC455_48909	93	1.94	Mlig455_048405, Mlig455_049069	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.490 Region-enriched R2: 4.721/0.03142 Region-enriched R7: 4.417/0.01493	ASIC1	0.988	-	-	-	0.988	-	-	Mlig455_048405 {REF} {Length: 2732} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=163.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.6, Expect=4e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=55.8, Expect=1e-07]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=112, Expect=8e-26]} {RNA1310_26678} {RNA815_24347} Mlig455_049069 {REF} {Length: 2732} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=163.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.2, Expect=5e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=55.8, Expect=1e-07]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=112, Expect=8e-26]} {RNA1310_26678} {RNA815_24347}
4.	MligTC455_40756	35	0.73	Mlig455_050356, Mlig455_065112	Neo: - Age: -		0.986	-	-	-	0.986	-	-	Mlig455_050356 {REF} {Length: 740} {NoTransDecoderORF} {RNA1509_38191} {RNA1310_5321.1} {RNA815_14836} Mlig455_065112 {REF} {Length: 277} {NoTransDecoderORF} {RNA1509_38191} {RNA1310_5321.1} {RNA815_14836}
5.	MligTC455_20332	34	0.71	Mlig455_038515	Neo: - Age: -		0.979	-	-	-	0.979	-	-	Mlig455_038515 {REF} {Length: 2092} {RNA1509_52468} {RNA1310_41235} {RNA815_11414.1}
6.	MligTC455_40649	24	0.49	Mlig455_066232	Neo: - Age: -		0.973	-	-	-	0.973	-	-	Mlig455_066232 {REF} {Length: 2453} {RNA1310_42980.1} {RNA815_47590}
7.	MligTC455_33239	57	1.18	Mlig455_006962	Neo: - Age: -	CACNG5	0.972	-	-	-	0.972	-	-	Mlig455_006962 {REF} {Length: 1957} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=72.5]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=60.2]} {Human: ENSG00000075429, CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5, [Score=91.3, Expect=5e-20]; ENSG00000105605, CACNG7, calcium voltage-gated channel auxiliary subunit gamma 7, [Score=89.0, Expect=4e-19]} {Mouse: ENSMUSG00000040373, Cacng5, calcium channel, voltage-dependent, gamma subunit 5, [Score=90.1, Expect=9e-20]; ENSMUSG00000069806, Cacng7, calcium channel, voltage-dependent, gamma subunit 7, [Score=89.0, Expect=3e-19]; ENSMUSG00000096998, Cacng7, calcium channel, voltage-dependent, gamma subunit 7, [Score=89.0, Expect=3e-19]} {Dmel: FBgn0064123, stg1, stargazin-like protein, [Score=62.0, Expect=6e-10]} {Smed: dd_Smed_v6_20066_0_1, dd_Smed_v6_20066_0_1, [RH, Score=228, Expect=2e-68]} {RNA1310_39723} {RNA815_37605}
8.	MligTC455_45683	346	7.21	Mlig455_067172	Neo: - Age: Down-Up-Down Region-enriched R7: 4.371/0.00009		0.97	-	-	-	0.970	-	-	Mlig455_067172 {REF} {Length: 932} {Pfam: Late nodulin protein [PF07127.13, score=20.1]} {RNA1310_45419} {RNA815_22274}
9.	MligTC455_43389	18	0.38	Mlig455_019091	Neo: - Age: -	PRKAR2A	0.968	-	-	-	0.968	-	-	Mlig455_019091 {REF} {Length: 2410} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=122.4]; Regulatory subunit of type II PKA R-subunit [PF02197.19, score=40.5]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=305, Expect=2e-100]; ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=313, Expect=9e-104]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=335, Expect=1e-112]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=219, Expect=2e-68]} {Smed: dd_Smed_v6_4188_0_1, dd_Smed_v6_4188_0_1, [Score=335, Expect=6e-113]} {RNA1509_34470} {RNA1310_27777} {RNA815_5628}
10.	MligTC455_25371	13	0.26	Mlig455_014547, Mlig455_014550	Neo: - Age: Up-Down-Up	NCAM2	0.967	-	-	-	0.967	-	-	Mlig455_014547 {REF} {Length: 1183} {Pfam: Integrase zinc binding domain [PF17921.3, score=56.1]} {RNA1509_45000} {RNA1310_89740} Mlig455_014550 {REF} {Length: 5582} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=102.0]; Immunoglobulin I-set domain [PF07679.18, score=80.2]; Immunoglobulin domain [PF13895.8, score=71.6]; Immunoglobulin domain [PF00047.27, score=52.0]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=43.9]; Immunoglobulin V-set domain [PF07686.19, score=29.5]} {Human: ENSG00000154654, NCAM2, neural cell adhesion molecule 2, [Score=122, Expect=3e-28]} {Mouse: ENSMUSG00000022762, Ncam2, neural cell adhesion molecule 2, [Score=115, Expect=3e-26]} {Dmel: FBgn0033159, Dscam1, Down syndrome cell adhesion molecule 1, [Score=60.8, Expect=4e-09]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=70.1, Expect=4e-12]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=53.9, Expect=3e-07]} {RNA1509_40266} {RNA1310_7040} {RNA815_17849}
11.	MligTC455_53639	20	0.42	Mlig455_033414	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_033414 {REF} {Length: 198} {NoTransDecoderORF} {RNA1310_131793}
12.	MligTC455_41125	1467	30.56	Mlig455_023570, Mlig455_066989	Neo: - Age: - Region-enriched R6: 2.886/0.00252	MUC22	0.962	-	-	-	0.962	-	-	Mlig455_023570 {REF} {Length: 1213} {Human: ENSG00000261272, MUC22, mucin 22, [Score=62.8, Expect=6e-11]} {RNA1509_36640} {RNA1310_51392} {RNA815_51264} Mlig455_066989 {REF} {Length: 1093} {Human: ENSG00000261272, MUC22, mucin 22, [Score=55.8, Expect=5e-09]} {RNA1509_36640} {RNA1310_51392} {RNA815_51264}
13.	MligTC455_10060	252	5.25	Mlig455_045586, Mlig455_045588, Mlig455_045645	Neo: - Age: - Region-enriched R3: 5.577/0.00014 Region-enriched R2: 5.093/0.02849		0.96	-	-	-	0.960	-	-	Mlig455_045586 {REF} {Length: 436} {NoTransDecoderORF} {RNA1310_84637} {RNA815_42836.2} Mlig455_045588 {REF} {Length: 472} {RNA1310_84637} {RNA815_42836.2} Mlig455_045645 {REF} {Length: 489} {RNA1310_84637} {RNA815_42836.2}
14.	MligTC455_41126	619	12.9	Mlig455_050185	Neo: - Age: - Region-enriched R6: 3.273/0.00035		0.96	-	-	-	0.960	-	-	Mlig455_050185 {REF} {Length: 671} {RNA1509_36640} {RNA1310_51392} {RNA815_51264}
15.	MligTC455_12560	18	0.37	Mlig455_059693	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_059693 {REF} {Length: 1160} {RNA1310_113662} {RNA815_53854}
16.	MligTC455_42287	73	1.52	Mlig455_042810	Neo: - Age: -	NPFFR1	0.957	-	-	-	0.957	-	-	Mlig455_042810 {REF} {Length: 1659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.4]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=64.7, Expect=8e-11]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=68.9, Expect=2e-12]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=65.5, Expect=2e-11]} {Dmel: FBgn0004622, TkR99D, Tachykinin-like receptor at 99D, [Score=83.6, Expect=3e-17]} {Celegans: WBGene00021897, ser-6, SERotonin/octopamine receptor family, [Score=65.1, Expect=2e-11]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=69.7, Expect=5e-13]} {RNA1310_19087.2} {RNA815_19700}
17.	MligTC455_12661	25	0.51	Mlig455_063823	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_063823 {REF} {Length: 1191} {RNA1310_131240}
18.	MligTC455_36826	28	0.58	Mlig455_013198	Neo: - Age: - Region-enriched R2: 5.359/0.01396	HSPB6	0.951	-	-	-	0.951	-	-	Mlig455_013198 {REF} {Length: 2372} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=56.3]} {Human: ENSG00000004776, HSPB6, heat shock protein family B (small) member 6, [RH, Score=55.5, Expect=8e-09]} {Mouse: ENSMUSG00000036854, Hspb6, heat shock protein, alpha-crystallin-related, B6, [RH, Score=58.5, Expect=7e-10]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_15128_0_1, dd_Smed_v6_15128_0_1, [RH, Score=81.3, Expect=3e-17]} {RNA1310_41920} {RNA815_42079}

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