Data search
Results for MligTC455_09061
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09061 | 310 | 6.46 | Mlig455_037032 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.300 Region-enriched R5: 1.194/0.01029 |
ERCC3 | Mlig455_037032 {REF} {Length: 6165} {Pfam: ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=389.0]; Helicase conserved C-terminal domain [PF13625.8, score=116.7]; Type III restriction enzyme, res subunit [PF04851.17, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=39.4]; SNF2-related domain [PF00176.25, score=25.1]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=19.2]} {Human: ENSG00000163161, ERCC3, ERCC excision repair 3, TFIIH core complex helicase subunit, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024382, Ercc3, excision repair cross-complementing rodent repair deficiency, complementation group 3, [RH, Score=1019, Expect=0.0]} {Dmel: FBgn0001179, hay, haywire, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00013441, xpb-1, XPB (Xeroderma Pigmentosum complementation group B) related, [RH, Score=928, Expect=0.0]} {Smed: dd_Smed_v6_9996_0_1, dd_Smed_v6_9996_0_1, [RH, Score=765, Expect=0.0]} {RNA1509_12216, RNA1509_39254, RNA1509_57341} {RNA1310_7003, RNA1509_12216, RNA1509_39254, RNA1509_57341} {RNA1509_12216, RNA1509_39254, RNA1509_57341, RNA815_3026.1} |
Cumulative graph for MligTC455_09061
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.317 | 3.228 | 0.38176 | 1.00000 | |
| RegionR2 | 1.022 | 3.228 | 0.08899 | 0.36575 | |
| RegionR3 | -0.047 | 3.228 | 0.92673 | 1.00000 | |
| RegionR4 | -0.016 | 3.228 | 0.98081 | 1.00000 | |
| RegionR5 | 1.194 | 3.228 | 0.00101 | 0.01029 | |
| RegionR6 | 0.222 | 3.228 | 0.64279 | 1.00000 | |
| RegionR7 | -1.641 | 3.228 | 0.06930 | 0.50565 | |
| RegionR8 | 0.583 | 3.228 | 0.46200 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.15 | 3.228 | 0.48846 | 1.00000 | |
| RegenerationR2 | 0.349 | 3.228 | 0.41004 | 0.82044 | |
| RegenerationR3 | 0.649 | 3.228 | 0.19773 | 0.63286 | |
| RegenerationR4 | 0.159 | 3.228 | 0.74652 | 0.96971 | |
| RegenerationR5 | -0.807 | 3.228 | 0.04742 | 0.35266 | |
| RegenerationR6 | 0.871 | 3.228 | 0.08287 | 0.35983 | |
| RegenerationBL | 0.982 | 3.228 | 0.19142 | 0.52575 | |
| RegenerationTP | 0.441 | 3.228 | 0.62360 | 0.97413 |
Genes with expression patterns similar to MligTC455_09061
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09061 | 310 | 6.46 | Mlig455_037032 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.300 Region-enriched R5: 1.194/0.01029 |
ERCC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_037032 {REF} {Length: 6165} {Pfam: ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=389.0]; Helicase conserved C-terminal domain [PF13625.8, score=116.7]; Type III restriction enzyme, res subunit [PF04851.17, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=39.4]; SNF2-related domain [PF00176.25, score=25.1]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=19.2]} {Human: ENSG00000163161, ERCC3, ERCC excision repair 3, TFIIH core complex helicase subunit, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024382, Ercc3, excision repair cross-complementing rodent repair deficiency, complementation group 3, [RH, Score=1019, Expect=0.0]} {Dmel: FBgn0001179, hay, haywire, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00013441, xpb-1, XPB (Xeroderma Pigmentosum complementation group B) related, [RH, Score=928, Expect=0.0]} {Smed: dd_Smed_v6_9996_0_1, dd_Smed_v6_9996_0_1, [RH, Score=765, Expect=0.0]} {RNA1509_12216, RNA1509_39254, RNA1509_57341} {RNA1310_7003, RNA1509_12216, RNA1509_39254, RNA1509_57341} {RNA1509_12216, RNA1509_39254, RNA1509_57341, RNA815_3026.1} |
| 2. | MligTC455_09060 | 276 | 5.75 | Mlig455_009276 | Neo: - Age: - Region-enriched R5: 1.044/0.04246 |
ERCC3 | 5.698 | 0.989 | 0.993 | 0.983 | 0.885 | 0.925 | 0.923 | Mlig455_009276 {REF} {Length: 4027} {TRANSSPLICED} {Pfam: ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=389.1]; Helicase conserved C-terminal domain [PF13625.8, score=116.7]; Type III restriction enzyme, res subunit [PF04851.17, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=39.5]; SNF2-related domain [PF00176.25, score=25.2]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=19.2]} {Human: ENSG00000163161, ERCC3, ERCC excision repair 3, TFIIH core complex helicase subunit, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024382, Ercc3, excision repair cross-complementing rodent repair deficiency, complementation group 3, [RH, Score=1018, Expect=0.0]} {Dmel: FBgn0001179, hay, haywire, [RH, Score=994, Expect=0.0]} {Celegans: WBGene00013441, xpb-1, XPB (Xeroderma Pigmentosum complementation group B) related, [RH, Score=930, Expect=0.0]} {Smed: dd_Smed_v6_9996_0_1, dd_Smed_v6_9996_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_12216} {RNA1310_7003} {RNA815_3026.1} |
| 3. | MligTC455_52111 | 120 | 2.5 | Mlig455_036893 | Neo: - Age: - Region-enriched R5: 2.209/0.02779 |
1.685 | 0.733 | - | 0.952 | - | - | - | Mlig455_036893 {REF} {Length: 1778} {RNA1310_41662.1} {RNA815_33206} |
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