M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09178

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09178 26 0.54 Mlig455_003584

Neo: -

Age: -

 Mlig455_003584 {REF} {Length: 2040} {Pfam: Innexin [PF00876.20, score=395.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=123, Expect=3e-31]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [RH, Score=383, Expect=2e-131]} {Smed: dd_Smed_v6_11077_0_1, dd_Smed_v6_11077_0_1, [Score=363, Expect=2e-122]} {RNA1310_17631} {RNA815_17043}

Cumulative graph for MligTC455_09178

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_09178

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09178 26 0.54 Mlig455_003584

Neo: -

Age: -

 1 - - - - - 1.000 Mlig455_003584 {REF} {Length: 2040} {Pfam: Innexin [PF00876.20, score=395.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=123, Expect=3e-31]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [RH, Score=383, Expect=2e-131]} {Smed: dd_Smed_v6_11077_0_1, dd_Smed_v6_11077_0_1, [Score=363, Expect=2e-122]} {RNA1310_17631} {RNA815_17043}
2. MligTC455_34082 171 3.57 Mlig455_003516

Neo: -

Age: Down-Up-Up

Region-enriched R8: 6.643/0.00000
Region-enriched R7: 3.603/0.03396

 0.991 - - - - - 0.991 Mlig455_003516 {REF} {Length: 857} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50908} {RNA1310_60543} {RNA815_37583}
3. MligTC455_29728 24 0.49 Mlig455_038098, Mlig455_068822

Neo: -

Age: logFC(26M/2M)=-0.405

 ANKRD50 0.99 - - - - - 0.990

Mlig455_038098 {REF} {Length: 3096} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=48.5]; Mab-21 protein [PF03281.16, score=44.1]; Ankyrin repeats (many copies) [PF13857.8, score=42.9]; Ankyrin repeats (3 copies) [PF12796.9, score=42.4]; Ankyrin repeat [PF13606.8, score=36.4]; Ankyrin repeat [PF00023.32, score=31.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=66.2, Expect=2e-10]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=65.1, Expect=6e-10]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=67.0, Expect=9e-11]; ENSMUSG00000078487, Ankrd65, ankyrin repeat domain 65, [Score=66.2, Expect=6e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.7, Expect=5e-10]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=62.4, Expect=2e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_7571_0_1, dd_Smed_v6_7571_0_1, [Score=58.2, Expect=4e-09]} {RNA1509_27730} {RNA1310_4721} {RNA815_2426.1}

Mlig455_068822 {REF} {Length: 3134} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=51.3]; Ankyrin repeats (many copies) [PF13857.8, score=44.5]; Mab-21 protein [PF03281.16, score=44.1]; Ankyrin repeats (3 copies) [PF12796.9, score=43.9]; Ankyrin repeat [PF13606.8, score=38.3]; Ankyrin repeat [PF00023.32, score=33.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=68.2, Expect=7e-11]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=66.6, Expect=2e-10]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=68.9, Expect=2e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=66.6, Expect=1e-10]; ENSMUSG00000078487, Ankrd65, ankyrin repeat domain 65, [Score=66.6, Expect=5e-11]} {Dmel: FBgn0039590, CG10011, [Score=62.0, Expect=3e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_7571_0_1, dd_Smed_v6_7571_0_1, [Score=59.7, Expect=1e-09]} {RNA1509_27730, RNA1509_52247} {RNA1310_4721, RNA1509_52247} {RNA1509_52247, RNA815_2426.1}
4. MligTC455_16918 1218 25.38 Mlig455_039085, Mlig455_042780

Neo: -

Age: Up-Down-Down

Region-enriched R8: 5.308/0.00000
Region-enriched R7: 3.471/0.00026

 MECOM 0.989 - - - - - 0.989

Mlig455_039085 {REF} {Length: 4916} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=99.3]; C2H2-type zinc finger [PF13894.8, score=76.6]; Zinc-finger double domain [PF13465.8, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=41.2]; C2H2-type zinc finger [PF13912.8, score=35.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.9]; C2H2-type zinc-finger domain [PF13909.8, score=18.4]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=147, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=145, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=146, Expect=2e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=146, Expect=9e-35]} {Dmel: FBgn0045852, ham, hamlet, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-44]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}

Mlig455_042780 {REF} {Length: 3778} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.4]; Zinc-finger double domain [PF13465.8, score=59.4]; C2H2-type zinc finger [PF13894.8, score=36.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.0]; C2H2-type zinc finger [PF13912.8, score=28.6]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; C2H2-type zinc-finger domain [PF13909.8, score=21.2]; GAGA factor [PF09237.13, score=19.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=3e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=140, Expect=1e-34]} {Dmel: FBgn0032707, CG10348, [RH, Score=144, Expect=8e-37]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=144, Expect=9e-39]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}
5. MligTC455_24843 412 8.59 Mlig455_014713

Neo: -

Age: -

Region-enriched R8: 3.552/0.00000

 TRPM1 0.988 - - - - - 0.988 Mlig455_014713 {REF} {Length: 8336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=172.4]; Ankyrin repeats (many copies) [PF13637.8, score=126.4]; Ankyrin repeats (many copies) [PF13857.8, score=55.0]; Ankyrin repeat [PF13606.8, score=47.8]; Domain of unknown function (DUF4158) [PF13700.8, score=41.7]; Ankyrin repeat [PF00023.32, score=35.7]; RlmM ferredoxin-like domain [PF18125.3, score=24.8]; HMGL-like [PF00682.21, score=22.8]; Ion transport protein [PF00520.33, score=20.3]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.2, Expect=1e-16]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=91.7, Expect=8e-18]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=90.1, Expect=3e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=116, Expect=5e-26]} {RNA1509_6015} {RNA1310_1769} {RNA815_7984}
6. MligTC455_37711 41 0.86 Mlig455_009915

Neo: -

Age: -

 0.988 - - - - - 0.988 Mlig455_009915 {REF} {Length: 1326} {RNA1509_26004} {RNA1310_89855.1} {RNA815_1664.2}
7. MligTC455_08996 36 0.74 Mlig455_026604

Neo: -

Age: -

 ANK1 0.985 - - - - - 0.985 Mlig455_026604 {REF} {Length: 3269} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=180.0]; Ankyrin repeat [PF00023.32, score=153.8]; Ankyrin repeats (many copies) [PF13637.8, score=145.9]; Ankyrin repeat [PF13606.8, score=137.9]; Ankyrin repeats (many copies) [PF13857.8, score=125.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=159, Expect=6e-41]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=144, Expect=3e-36]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=143, Expect=4e-36]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=142, Expect=1e-35]; ENSMUSG00000032257, Ankk1, ankyrin repeat and kinase domain containing 1, [Score=138, Expect=2e-34]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=156, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=149, Expect=2e-38]} {Smed: dd_Smed_v6_11663_0_2, dd_Smed_v6_11663_0_2, [Score=132, Expect=5e-33]} {RNA1509_49335} {RNA1310_6702} {RNA815_17045}
8. MligTC455_10064 68 1.41 Mlig455_029458, Mlig455_029482

Neo: -

Age: -

 0.981 - - - - - 0.981

Mlig455_029458 {REF} {Length: 1576} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=28.7]} {RNA1310_20120.1} {RNA815_50604}

Mlig455_029482 {REF} {Length: 3696} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=29.0]} {RNA1310_20120.1} {RNA815_30795}
9. MligTC455_18800 26 0.55 Mlig455_031326

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_031326 {REF} {Length: 964} {TRANSSPLICED}
10. MligTC455_49056 35 0.73 Mlig455_050966

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_050966 {REF} {Length: 3161} {RNA1310_22446.1} {RNA815_21821.1}
11. MligTC455_16657 842 17.53 Mlig455_042515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.634

Region-enriched R7: 2.586/0.00000
Region-enriched R8: 2.572/0.00150

Regeneration-upregulated BL: 2.469

Regeneration-enriched BL: 2.469

 FERD3L 0.973 - - - - - 0.973 Mlig455_042515 {REF} {Length: 1703} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.2]} {Human: ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=4e-29]} {Mouse: ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=3e-29]} {Dmel: FBgn0037937, Fer3, 48 related 3, [RH, Score=119, Expect=5e-32]} {Celegans: WBGene00001957, hlh-13, Helix-loop-helix protein 13, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_8096_0_1, dd_Smed_v6_8096_0_1, [RH, Score=120, Expect=2e-32]} {RNA1509_28158} {RNA1310_23170} {RNA815_15242}
12. MligTC455_33717 54 1.13 Mlig455_033324

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.739

 0.971 - - - - - 0.971 Mlig455_033324 {REF} {Length: 1158} {Smed: dd_Smed_v6_40744_0_1, dd_Smed_v6_40744_0_1, [Score=44.3, Expect=1e-05]} {RNA1509_48973} {RNA1310_39833} {RNA815_36286}
13. MligTC455_02318 69 1.45 Mlig455_044964

Neo: -

Age: -

Region-enriched R8: 6.174/0.00046
Region-enriched R6: 3.164/0.04864

 0.968 - - - - - 0.968 Mlig455_044964 {REF} {Length: 1245} {Pfam: Ets-domain [PF00178.24, score=22.6]} {Smed: dd_Smed_v6_5087_0_2, dd_Smed_v6_5087_0_2, [Score=49.3, Expect=8e-07]} {RNA1310_46665} {RNA815_51481}
14. MligTC455_40922 2760 57.5 Mlig455_019713

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.414

Region-enriched R7: 1.766/0.00003

 0.968 - - - - - 0.968 Mlig455_019713 {REF} {Length: 2146} {Pfam: Zinc-binding domain [PF13695.8, score=81.1]} {Mouse: ENSMUSG00000033355, Rtp4, receptor transporter protein 4, [RH, Score=62.8, Expect=7e-11]} {Smed: dd_Smed_v6_4477_0_1, dd_Smed_v6_4477_0_1, [Score=101, Expect=4e-25]} {RNA1509_3607, RNA1509_45450, RNA1509_51216} {RNA1310_14449, RNA1509_3607, RNA1509_45450, RNA1509_51216} {RNA1509_3607, RNA1509_45450, RNA1509_51216, RNA815_2235}
15. MligTC455_40587 52 1.09 Mlig455_002665

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_002665 {REF} {Length: 2505} {TRANSSPLICED} {Smed: dd_Smed_v6_14679_0_1, dd_Smed_v6_14679_0_1, [Score=85.9, Expect=9e-18]}
16. MligTC455_32278 31 0.65 Mlig455_041080

Neo: -

Age: Up-Down-Down

 USH2A 0.963 - - - - - 0.963 Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
17. MligTC455_25654 389 8.11 Mlig455_000129, Mlig455_027212, Mlig455_028212, Mlig455_028213, Mlig455_028214, Mlig455_039873, Mlig455_064984

Neo: -

Age: -

Region-enriched R4: 2.312/0.04499

 0.962 - - - - - 0.962

Mlig455_000129 {REF} {Length: 1124} {Celegans: WBGene00007723, C25F9.2, [Score=62.0, Expect=8e-11]} {RNA1310_7131} {RNA815_8935}

Mlig455_027212 {REF} {Length: 2742} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=139.5]} {Celegans: WBGene00007723, C25F9.2, [Score=313, Expect=4e-91]} {RNA1310_7131} {RNA815_8935}

Mlig455_028212 {REF} {Length: 638} {NoTransDecoderORF} {RNA1509_31372} {RNA1310_7131} {RNA815_8935}

Mlig455_028213 {REF} {Length: 1119} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935}

Mlig455_028214 {REF} {Length: 1116} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935}

Mlig455_039873 {REF} {Length: 3987} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=89.9]} {Celegans: WBGene00007723, C25F9.2, [Score=291, Expect=4e-82]} {RNA1310_7131} {RNA815_8935}

Mlig455_064984 {REF} {Length: 2969} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=136.0]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=373, Expect=3e-111]} {RNA1310_7131} {RNA815_8935}
18. MligTC455_29604 264 5.49 Mlig455_070200

Neo: -

Age: Down-Up-Down

 0.96 - - - - - 0.960 Mlig455_070200 {REF} {Length: 1448} {Pfam: Dynein light chain type 1 [PF01221.20, score=60.5]; EF-hand domain pair [PF13499.8, score=26.1]; EF hand [PF00036.34, score=24.6]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=127, Expect=1e-37]} {RNA1509_53012} {RNA1310_43825} {RNA815_11614}
19. MligTC455_15986 139 2.9 Mlig455_048132

Neo: -

Age: -

Region-enriched R8: 5.016/0.00239
Region-enriched R7: 4.765/0.00007

 0.958 - - - - - 0.958 Mlig455_048132 {REF} {Length: 1543} {RNA1509_47436} {RNA1310_22809.1} {RNA815_55300}
20. MligTC455_28001 57 1.19 Mlig455_000099

Neo: -

Age: Down-Down-Up

 SIDT2 0.958 - - - - - 0.958 Mlig455_000099 {REF} {Length: 4002} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=679.3]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [Score=534, Expect=1e-176]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=460, Expect=7e-149]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=293, Expect=4e-87]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [RH, Score=516, Expect=2e-171]} {RNA1509_19245} {RNA1310_3733} {RNA815_12922}
21. MligTC455_23145 43 0.91 Mlig455_014752

Neo: -

Age: logFC(26M/2M)=-0.605

 AC243734.1 0.956 - - - - - 0.956 Mlig455_014752 {REF} {Length: 3129} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=213.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=186.0]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=421, Expect=4e-142]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [RH, Score=429, Expect=1e-145]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [RH, Score=491, Expect=7e-166]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [RH, Score=402, Expect=5e-135]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [RH, Score=486, Expect=1e-167]} {RNA1310_22414.1} {RNA815_34255}
22. MligTC455_49304 46 0.95 Mlig455_044321

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_044321 {REF} {Length: 701} {RNA1509_20965} {RNA1310_92283}
23. MligTC455_18821 223 4.64 Mlig455_042125

Neo: -

Age: -

Region-enriched R8: 8.011/0.00034

 WNT1 0.954 - - - - - 0.954 Mlig455_042125 {REF} {Length: 2758} {Pfam: wnt family [PF00110.21, score=265.1]} {Human: ENSG00000125084, WNT1, Wnt family member 1, [Score=180, Expect=1e-51]; ENSG00000105989, WNT2, Wnt family member 2, [Score=178, Expect=3e-51]; ENSG00000002745, WNT16, Wnt family member 16, [Score=172, Expect=6e-49]; ENSG00000154764, WNT7A, Wnt family member 7A, [Score=172, Expect=8e-49]} {Mouse: ENSMUSG00000022997, Wnt1, wingless-type MMTV integration site family, member 1, [Score=180, Expect=7e-52]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=176, Expect=1e-50]; ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=175, Expect=3e-50]; ENSMUSG00000030093, Wnt7a, wingless-type MMTV integration site family, member 7A, [Score=172, Expect=5e-49]} {Dmel: FBgn0004360, Wnt2, Wnt oncogene analog 2, [Score=145, Expect=2e-39]} {Celegans: WBGene00000858, cwn-2, [Score=159, Expect=2e-44]} {Smed: dd_Smed_v6_28398_0_1, dd_Smed_v6_28398_0_1, [RH, Score=227, Expect=9e-70]} {RNA1509_55690} {RNA1310_28464, RNA1509_55690} {RNA1509_55690, RNA815_12843}
24. MligTC455_07669 60 1.26 Mlig455_063001

Neo: -

Age: -

 LRG1 0.953 - - - - - 0.953 Mlig455_063001 {REF} {Length: 2041} {Pfam: Leucine rich repeat [PF13855.8, score=55.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=33.0]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.0, Expect=6e-10]; ENSG00000040608, RTN4R, reticulon 4 receptor, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=52.8, Expect=5e-07]; ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0262473, Tl, Toll, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=59.3, Expect=3e-09]} {RNA1310_98686}
25. MligTC455_31105 216 4.5 Mlig455_004970, Mlig455_010558, Mlig455_012924, Mlig455_028857, Mlig455_040662, Mlig455_044452

Neo: -

Age: Up-Down-Down

 0.953 - - - - - 0.953

Mlig455_004970 {REF} {Length: 322} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729}

Mlig455_010558 {REF} {Length: 797} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=122.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=62.0, Expect=4e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_012924 {REF} {Length: 1648} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.4]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=67.0, Expect=8e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_028857 {REF} {Length: 1715} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=116.6]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=70.1, Expect=9e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_040662 {REF} {Length: 7892} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=70.9, Expect=5e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_044452 {REF} {Length: 1505} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.4]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=67.4, Expect=5e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}
26. MligTC455_51499 160 3.34 Mlig455_009457, Mlig455_061914

Neo: -

Age: logFC(26M/2M)=-0.353

 ANK2, ANKRD44 0.953 - - - - - 0.953

Mlig455_009457 {REF} {Length: 3258} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=136.9]; Ankyrin repeats (many copies) [PF13637.8, score=108.1]; Ankyrin repeat [PF13606.8, score=81.7]; Ankyrin repeats (many copies) [PF13857.8, score=69.3]; Ankyrin repeat [PF00023.32, score=62.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=79.7, Expect=1e-14]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=80.9, Expect=3e-15]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_2072_0_24, dd_Smed_v6_2072_0_24, [Score=51.6, Expect=1e-06]} {RNA1509_20762} {RNA1310_5910.1} {RNA815_1941}

Mlig455_061914 {REF} {Length: 3053} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=156.6]; Ankyrin repeats (many copies) [PF13637.8, score=129.0]; Ankyrin repeat [PF13606.8, score=84.6]; Ankyrin repeats (many copies) [PF13857.8, score=77.6]; Ankyrin repeat [PF00023.32, score=57.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=19.8]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=87.4, Expect=4e-17]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=67.0, Expect=5e-11]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=51.2, Expect=2e-06]} {RNA1509_20762} {RNA1310_5910.1, RNA1509_20762} {RNA1509_20762, RNA815_1941}
27. MligTC455_48225 63 1.31 Mlig455_056723, Mlig455_060295

Neo: -

Age: -

 GLRA3 0.952 - - - - - 0.952

Mlig455_056723 {REF} {Length: 2758} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=129.4]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=270, Expect=2e-84]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=265, Expect=1e-82]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=264, Expect=3e-82]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=258, Expect=3e-80]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=265, Expect=7e-83]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=263, Expect=4e-82]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=263, Expect=6e-82]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=1e-79]; ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=255, Expect=9e-79]; ENSMUSG00000029212, Gabrb1, gamma-aminobutyric acid (GABA) A receptor, subunit beta 1, [Score=253, Expect=9e-78]} {Dmel: FBgn0024963, GluClalpha, [Score=254, Expect=1e-78]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=255, Expect=4e-79]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=224, Expect=4e-67]} {RNA1310_13574.1} {RNA815_10577.1}

Mlig455_060295 {REF} {Length: 2660} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=129.6]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=95.7]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=240, Expect=4e-73]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=235, Expect=3e-71]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=233, Expect=8e-71]} {Mouse: ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=234, Expect=4e-71]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=233, Expect=2e-70]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=233, Expect=5e-71]; ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=226, Expect=7e-68]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=225, Expect=7e-68]} {Dmel: FBgn0024963, GluClalpha, [Score=215, Expect=4e-64]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=188, Expect=4e-54]} {RNA1310_13574.1} {RNA815_10577.1}
28. MligTC455_42326 1048 21.82 Mlig455_056343

Neo: -

Age: -

Region-enriched R7: 2.634/0.00000
Region-enriched R8: 2.077/0.00430

 EVX1 0.95 - - - - - 0.950 Mlig455_056343 {REF} {Length: 1485} {Pfam: Homeodomain [PF00046.31, score=74.8]} {Human: ENSG00000106038, EVX1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSG00000174279, EVX2, even-skipped homeobox 2, [RH, Score=130, Expect=8e-34]} {Mouse: ENSMUSG00000005503, Evx1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSMUSG00000001815, Evx2, even-skipped homeobox 2, [RH, Score=131, Expect=3e-34]} {Dmel: FBgn0000606, eve, even skipped, [RH, Score=137, Expect=4e-37]} {Celegans: WBGene00006873, vab-7, Homeobox protein vab-7, [RH, Score=110, Expect=3e-28]} {Smed: dd_Smed_v6_18147_0_1, dd_Smed_v6_18147_0_1, [RH, Score=117, Expect=2e-32]} {RNA1509_36832} {RNA1310_42544} {RNA815_33148}
29. MligTC455_47703 57 1.19 Mlig455_069671

Neo: -

Age: Up-Up-Down

Region-enriched R2: 5.228/0.01687

 0.95 - - - - - 0.950 Mlig455_069671 {REF} {Length: 3246} {TRANSSPLICED} {RNA1509_12893} {RNA1310_9119.1, RNA1509_12893} {RNA1509_12893, RNA815_10129}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA