M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_47703

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47703 57 1.19 Mlig455_069671

Neo: -

Age: Up-Up-Down

Region-enriched R2: 5.228/0.01687

 Mlig455_069671 {REF} {Length: 3246} {TRANSSPLICED} {RNA1509_12893} {RNA1310_9119.1, RNA1509_12893} {RNA1509_12893, RNA815_10129}

Cumulative graph for MligTC455_47703

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.075 1.208 0.02256 0.40709
RegionR2 5.228 1.208 0.00069 0.01687
RegionR3 0.204 1.208 0.73260 1.00000
RegionR4 -4.107 1.208 1.00000 1.00000
RegionR5 -0.407 1.208 0.97541 1.00000
RegionR6 1.208 1.208 0.33880 0.92595
RegionR7 1.424 1.208 0.39134 1.00000
RegionR8 4.524 1.208 0.00408 0.11170

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.495 1.208 1.00000 1.00000
RegenerationR2 1.397 1.208 0.22915 0.67687
RegenerationR3 4.464 1.208 0.00375 0.11000
RegenerationR4 4.941 1.208 0.00067 0.02647
RegenerationR5 2.753 1.208 0.01464 0.21073
RegenerationR6 4.35 1.208 0.00235 0.05489
RegenerationBL 3.994 1.208 0.00707 0.08177
RegenerationTP 4.127 1.208 0.00212 0.07452


Genes with expression patterns similar to MligTC455_47703

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47703 57 1.19 Mlig455_069671

Neo: -

Age: Up-Up-Down

Region-enriched R2: 5.228/0.01687

 4 1.000 1.000 - - 1.000 1.000 Mlig455_069671 {REF} {Length: 3246} {TRANSSPLICED} {RNA1509_12893} {RNA1310_9119.1, RNA1509_12893} {RNA1509_12893, RNA815_10129}
2. MligTC455_42326 1048 21.82 Mlig455_056343

Neo: -

Age: -

Region-enriched R7: 2.634/0.00000
Region-enriched R8: 2.077/0.00430

 EVX1 1.706 - 0.721 - - - 0.985 Mlig455_056343 {REF} {Length: 1485} {Pfam: Homeodomain [PF00046.31, score=74.8]} {Human: ENSG00000106038, EVX1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSG00000174279, EVX2, even-skipped homeobox 2, [RH, Score=130, Expect=8e-34]} {Mouse: ENSMUSG00000005503, Evx1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSMUSG00000001815, Evx2, even-skipped homeobox 2, [RH, Score=131, Expect=3e-34]} {Dmel: FBgn0000606, eve, even skipped, [RH, Score=137, Expect=4e-37]} {Celegans: WBGene00006873, vab-7, Homeobox protein vab-7, [RH, Score=110, Expect=3e-28]} {Smed: dd_Smed_v6_18147_0_1, dd_Smed_v6_18147_0_1, [RH, Score=117, Expect=2e-32]} {RNA1509_36832} {RNA1310_42544} {RNA815_33148}
3. MligTC455_20097 1223 25.49 Mlig455_023539, Mlig455_023644

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.339

Region-enriched R8: 3.355/0.00001
Region-enriched R7: 2.047/0.03129

Regeneration-upregulated BL: 2.571

Regeneration-enriched BL: 2.571

 0.982 - - - - - 0.982

Mlig455_023539 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206} {RNA815_15099}

Mlig455_023644 {REF} {Length: 2780} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206, RNA1509_20731} {RNA1509_20731, RNA815_15099}
4. MligTC455_02318 69 1.45 Mlig455_044964

Neo: -

Age: -

Region-enriched R8: 6.174/0.00046
Region-enriched R6: 3.164/0.04864

 0.981 - - - - - 0.981 Mlig455_044964 {REF} {Length: 1245} {Pfam: Ets-domain [PF00178.24, score=22.6]} {Smed: dd_Smed_v6_5087_0_2, dd_Smed_v6_5087_0_2, [Score=49.3, Expect=8e-07]} {RNA1310_46665} {RNA815_51481}
5. MligTC455_32482 8 0.17 Mlig455_039898

Neo: Irradiation

Age: Up-Down-Down

 0.978 - - - - 0.978 - Mlig455_039898 {REF} {Length: 7423} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=38.6]; Shugoshin N-terminal coiled-coil region [PF07558.13, score=20.3]} {RNA1509_13154, RNA1509_26472} {RNA1310_251, RNA1509_26472} {RNA1509_26472, RNA815_5928.1}
6. MligTC455_16301 748 15.58 Mlig455_032450, Mlig455_032469

Neo: -

Age: -

Region-enriched R7: 3.153/0.00003

 CASP3 0.976 - - - - - 0.976

Mlig455_032450 {REF} {Length: 2234} {Pfam: Caspase domain [PF00656.24, score=83.0]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=85.1, Expect=1e-17]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=84.7, Expect=9e-18]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=56.6, Expect=2e-08]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=90.9, Expect=5e-20]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=88.2, Expect=2e-19]} {RNA1509_37332, RNA1509_42533} {RNA1310_14910.1, RNA1509_37332, RNA1509_42533} {RNA1509_37332, RNA1509_42533, RNA815_4393.1}

Mlig455_032469 {REF} {Length: 2184} {Pfam: Caspase domain [PF00656.24, score=84.6]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=84.7, Expect=1e-17]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=84.3, Expect=1e-17]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=56.6, Expect=2e-08]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=90.9, Expect=5e-20]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=87.8, Expect=2e-19]} {RNA1509_42533} {RNA1310_14910.1} {RNA815_4393.1}
7. MligTC455_43230 1406 29.28 Mlig455_053409

Neo: -

Age: -

Region-enriched R8: 2.330/0.00584
Region-enriched R7: 1.999/0.00894

Regeneration-upregulated BL: 1.849

Regeneration-enriched BL: 1.849

 0.975 - - - - - 0.975 Mlig455_053409 {REF} {Length: 4778} {RNA1509_11530} {RNA1310_21003, RNA1509_11530} {RNA1509_11530, RNA815_13912}
8. MligTC455_53117 86 1.79 Mlig455_029454

Neo: -

Age: logFC(26M/2M)=-0.687

 CHRNA4 0.972 - - - - - 0.972 Mlig455_029454 {REF} {Length: 3116} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=160.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=110.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.7]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=210, Expect=3e-59]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=210, Expect=5e-60]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=211, Expect=1e-59]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=209, Expect=5e-60]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=207, Expect=5e-60]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=204, Expect=5e-58]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=204, Expect=2e-56]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=202, Expect=1e-57]} {Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [RH, Score=451, Expect=1e-152]} {RNA1509_18288} {RNA1310_21192} {RNA815_24334}
9. MligTC455_42626 3871 80.64 Mlig455_022010, Mlig455_022016, Mlig455_058844

Neo: -

Age: -

Region-enriched R8: 5.333/0.00000
Region-enriched R7: 4.594/0.00000
Region-enriched R6: 3.669/0.00000

 NGFR 0.971 - - - - - 0.971

Mlig455_022010 {REF} {Length: 2807} {Pfam: Death domain [PF00531.24, score=43.7]; TNFR/NGFR cysteine-rich region [PF00020.20, score=39.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.0]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=87.4, Expect=7e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=90.9, Expect=3e-19]} {RNA1509_51303} {RNA1310_14301} {RNA815_11451.1}

Mlig455_022016 {REF} {Length: 2180} {Pfam: Death domain [PF00531.24, score=43.4]; TNFR/NGFR cysteine-rich region [PF00020.20, score=36.4]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.6]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [Score=88.2, Expect=4e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [Score=58.9, Expect=8e-09]} {RNA1509_53598} {RNA1310_15008} {RNA815_11451.1}

Mlig455_058844 {REF} {Length: 2237} {Pfam: Death domain [PF00531.24, score=43.5]; TNFR/NGFR cysteine-rich region [PF00020.20, score=37.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=96.3, Expect=7e-21]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=99.4, Expect=5e-22]} {RNA1509_26617} {RNA1310_14301} {RNA815_26191}
10. MligTC455_41899 559 11.64 Mlig455_010282

Neo: -

Age: logFC(26M/2M)=-0.475

Region-enriched R8: 3.798/0.00000
Region-enriched R7: 3.545/0.00000

 NKX6-1 0.97 - - - - - 0.970 Mlig455_010282 {REF} {Length: 1603} {Pfam: Homeodomain [PF00046.31, score=71.7]} {Human: ENSG00000163623, NKX6-1, NK6 homeobox 1, [RH, Score=134, Expect=1e-35]; ENSG00000148826, NKX6-2, NK6 homeobox 2, [RH, Score=128, Expect=2e-34]} {Mouse: ENSMUSG00000035187, Nkx6-1, NK6 homeobox 1, [RH, Score=134, Expect=8e-36]; ENSMUSG00000041309, Nkx6-2, NK6 homeobox 2, [RH, Score=129, Expect=1e-34]} {Dmel: FBgn0040318, HGTX, [RH, Score=131, Expect=3e-34]} {Celegans: WBGene00000584, cog-1, COG-1B, [Score=97.4, Expect=4e-25]} {Smed: dd_Smed_v6_12873_0_1, dd_Smed_v6_12873_0_1, [RH, Score=129, Expect=3e-35]} {RNA1310_46596} {RNA815_5603}
11. MligTC455_06293 103 2.15 Mlig455_053860, Mlig455_053875, Mlig455_055343

Neo: -

Age: -

 0.965 - - - - - 0.965

Mlig455_053860 {REF} {Length: 469} {RNA1310_95227} {RNA815_45163}

Mlig455_053875 {REF} {Length: 533} {RNA1310_95227} {RNA815_45163}

Mlig455_055343 {REF} {Length: 526} {RNA1310_95227} {RNA815_45163}
12. MligTC455_16221 370 7.7 Mlig455_033881

Neo: -

Age: -

Region-enriched R8: 3.263/0.00115
Region-enriched R7: 2.555/0.01207

 0.964 - - - - - 0.964 Mlig455_033881 {REF} {Length: 1113} {RNA1310_29964} {RNA815_15923}
13. MligTC455_19934 704 14.66 Mlig455_001454

Neo: -

Age: -

Region-enriched R8: 4.340/0.00000
Region-enriched R7: 3.938/0.00000
Region-enriched R6: 1.934/0.02993

 HOXA10 0.964 - - - - - 0.964 Mlig455_001454 {REF} {Length: 2331} {Pfam: Homeodomain [PF00046.31, score=71.5]; Protein of unknown function (DUF2722) [PF10846.10, score=21.4]; Anti-sigma-K factor rskA [PF10099.11, score=20.2]} {Human: ENSG00000253293, HOXA10, homeobox A10, [RH, Score=97.4, Expect=1e-21]; ENSG00000128713, HOXD11, homeobox D11, [RH, Score=95.5, Expect=2e-21]; ENSG00000170178, HOXD12, homeobox D12, [RH, Score=95.1, Expect=9e-22]; ENSG00000123407, HOXC12, homeobox C12, [RH, Score=94.7, Expect=2e-21]; ENSG00000180818, HOXC10, homeobox C10, [RH, Score=94.4, Expect=6e-21]; ENSG00000005073, HOXA11, homeobox A11, [RH, Score=92.8, Expect=2e-20]; ENSG00000128710, HOXD10, homeobox D10, [RH, Score=92.8, Expect=2e-20]} {Mouse: ENSMUSG00000000938, Hoxa10, homeobox A10, [RH, Score=97.8, Expect=5e-22]; ENSMUSG00000042499, Hoxd11, homeobox D11, [RH, Score=95.9, Expect=1e-21]; ENSMUSG00000050328, Hoxc12, homeobox C12, [RH, Score=94.7, Expect=1e-21]; ENSMUSG00000022484, Hoxc10, homeobox C10, [RH, Score=94.4, Expect=5e-21]; ENSMUSG00000001823, Hoxd12, homeobox D12, [RH, Score=94.4, Expect=1e-21]; ENSMUSG00000050368, Hoxd10, homeobox D10, [RH, Score=93.2, Expect=1e-20]} {Dmel: FBgn0000015, Abd-B, Abdominal B, [RH, Score=106, Expect=7e-25]} {Celegans: WBGene00004024, php-3, Posterior Hox gene Paralog, [RH, Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_9061_0_1, dd_Smed_v6_9061_0_1, [RH, Score=132, Expect=2e-34]} {RNA1509_50329} {RNA1310_36793} {RNA815_27715}
14. MligTC455_34082 171 3.57 Mlig455_003516

Neo: -

Age: Down-Up-Up

Region-enriched R8: 6.643/0.00000
Region-enriched R7: 3.603/0.03396

 0.964 - - - - - 0.964 Mlig455_003516 {REF} {Length: 857} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50908} {RNA1310_60543} {RNA815_37583}
15. MligTC455_37711 41 0.86 Mlig455_009915

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_009915 {REF} {Length: 1326} {RNA1509_26004} {RNA1310_89855.1} {RNA815_1664.2}
16. MligTC455_16222 431 8.99 Mlig455_033888, Mlig455_054116

Neo: -

Age: logFC(26M/2M)=0.990

Region-enriched R8: 3.408/0.00045
Region-enriched R7: 2.502/0.03357

 0.96 - - - - - 0.960

Mlig455_033888 {REF} {Length: 1217} {RNA1310_29964} {RNA815_15923}

Mlig455_054116 {REF} {Length: 1404} {RNA1310_29964} {RNA815_15923}
17. MligTC455_31105 216 4.5 Mlig455_004970, Mlig455_010558, Mlig455_012924, Mlig455_028857, Mlig455_040662, Mlig455_044452

Neo: -

Age: Up-Down-Down

 0.96 - - - - - 0.960

Mlig455_004970 {REF} {Length: 322} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729}

Mlig455_010558 {REF} {Length: 797} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=122.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=62.0, Expect=4e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_012924 {REF} {Length: 1648} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.4]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=67.0, Expect=8e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_028857 {REF} {Length: 1715} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=116.6]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=70.1, Expect=9e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_040662 {REF} {Length: 7892} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.0]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=70.9, Expect=5e-13]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_044452 {REF} {Length: 1505} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.4]} {Smed: dd_Smed_v6_16441_0_5, dd_Smed_v6_16441_0_5, [Score=67.4, Expect=5e-12]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1}
18. MligTC455_20236 126 2.63 Mlig455_001568

Neo: -

Age: -

Regeneration-upregulated BL: 7.072

Regeneration-enriched BL: 7.072

 RTN4R 0.959 - - - - - 0.959 Mlig455_001568 {REF} {Length: 1726} {Pfam: Leucine rich repeat [PF13855.8, score=96.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=43.8]; Leucine-rich repeat [PF14580.8, score=19.4]} {Human: ENSG00000040608, RTN4R, reticulon 4 receptor, [Score=81.6, Expect=4e-16]} {Mouse: ENSMUSG00000043811, Rtn4r, reticulon 4 receptor, [Score=73.2, Expect=2e-13]; ENSMUSG00000111113, Rtn4r, reticulon 4 receptor, [Score=73.2, Expect=2e-13]; ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=71.6, Expect=7e-13]} {Dmel: FBgn0004364, 18w, 18 wheeler, [Score=72.8, Expect=3e-13]} {Celegans: WBGene00003915, pan-1, P-granule-associated novel protein 1, [Score=55.1, Expect=7e-08]} {RNA1310_33763} {RNA815_40856}
19. MligTC455_16657 842 17.53 Mlig455_042515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.634

Region-enriched R7: 2.586/0.00000
Region-enriched R8: 2.572/0.00150

Regeneration-upregulated BL: 2.469

Regeneration-enriched BL: 2.469

 FERD3L 0.958 - - - - - 0.958 Mlig455_042515 {REF} {Length: 1703} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.2]} {Human: ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=4e-29]} {Mouse: ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=3e-29]} {Dmel: FBgn0037937, Fer3, 48 related 3, [RH, Score=119, Expect=5e-32]} {Celegans: WBGene00001957, hlh-13, Helix-loop-helix protein 13, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_8096_0_1, dd_Smed_v6_8096_0_1, [RH, Score=120, Expect=2e-32]} {RNA1509_28158} {RNA1310_23170} {RNA815_15242}
20. MligTC455_16918 1218 25.38 Mlig455_039085, Mlig455_042780

Neo: -

Age: Up-Down-Down

Region-enriched R8: 5.308/0.00000
Region-enriched R7: 3.471/0.00026

 MECOM 0.957 - - - - - 0.957

Mlig455_039085 {REF} {Length: 4916} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=99.3]; C2H2-type zinc finger [PF13894.8, score=76.6]; Zinc-finger double domain [PF13465.8, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=41.2]; C2H2-type zinc finger [PF13912.8, score=35.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.9]; C2H2-type zinc-finger domain [PF13909.8, score=18.4]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=147, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=145, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=146, Expect=2e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=146, Expect=9e-35]} {Dmel: FBgn0045852, ham, hamlet, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-44]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}

Mlig455_042780 {REF} {Length: 3778} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.4]; Zinc-finger double domain [PF13465.8, score=59.4]; C2H2-type zinc finger [PF13894.8, score=36.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.0]; C2H2-type zinc finger [PF13912.8, score=28.6]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; C2H2-type zinc-finger domain [PF13909.8, score=21.2]; GAGA factor [PF09237.13, score=19.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=3e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=140, Expect=1e-34]} {Dmel: FBgn0032707, CG10348, [RH, Score=144, Expect=8e-37]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=144, Expect=9e-39]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}
21. MligTC455_31586 7 0.15 Mlig455_015306, Mlig455_024657, Mlig455_024660, Mlig455_048641, Mlig455_059721, Mlig455_068887

Neo: Int S/G2/M

Age: -

 ANGPT4, FCN1, TNXB 0.957 - - - - 0.957 -

Mlig455_015306 {REF} {Length: 1188} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=176.6]} {Human: ENSG00000229353, TNXB, tenascin XB, [RH, Score=135, Expect=5e-35]; ENSG00000236236, TNXB, tenascin XB, [RH, Score=134, Expect=1e-34]; ENSG00000168477, TNXB, tenascin XB, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=132, Expect=5e-34]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=6e-34]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=127, Expect=2e-33]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=126, Expect=7e-33]} {Dmel: FBgn0033312, CG8642, [Score=110, Expect=2e-27]} {Celegans: WBGene00020516, T15B7.1, [Score=60.1, Expect=4e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=112, Expect=8e-28]} {RNA1310_44670.1} {RNA815_23388}

Mlig455_024657 {REF} {Length: 866} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=173.9]} {Human: ENSG00000085265, FCN1, ficolin 1, [RH, Score=147, Expect=2e-41]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=136, Expect=1e-37]} {Dmel: FBgn0087011, CG41520, [RH, Score=116, Expect=5e-29]} {Celegans: WBGene00017013, ensh-1, [Score=57.4, Expect=3e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=106, Expect=1e-25]} {RNA1310_35640.2} {RNA815_23388}

Mlig455_024660 {REF} {Length: 1657} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=93.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=81.3, Expect=2e-17]; ENSG00000229353, TNXB, tenascin XB, [Score=78.2, Expect=3e-16]; ENSG00000168477, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]; ENSG00000236236, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=75.5, Expect=2e-15]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=73.9, Expect=5e-15]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=73.6, Expect=6e-15]; ENSMUSG00000026938, Fcna, ficolin A, [Score=72.4, Expect=1e-14]} {Dmel: FBgn0033312, CG8642, [Score=66.6, Expect=1e-12]} {RNA1509_16913} {RNA1310_74714} {RNA815_23388}

Mlig455_048641 {REF} {Length: 632} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=93.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=81.3, Expect=2e-17]; ENSG00000229353, TNXB, tenascin XB, [Score=78.2, Expect=3e-16]; ENSG00000236236, TNXB, tenascin XB, [Score=77.8, Expect=3e-16]; ENSG00000168477, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=75.5, Expect=2e-15]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=73.6, Expect=5e-15]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=73.6, Expect=6e-15]; ENSMUSG00000026938, Fcna, ficolin A, [Score=72.0, Expect=1e-14]} {Dmel: FBgn0033312, CG8642, [Score=66.6, Expect=1e-12]} {RNA1310_74714} {RNA815_23388}

Mlig455_059721 {REF} {Length: 1062} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=173.2]} {Human: ENSG00000085265, FCN1, ficolin 1, [RH, Score=143, Expect=2e-39]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=132, Expect=2e-35]} {Dmel: FBgn0087011, CG41520, [RH, Score=117, Expect=1e-28]} {Celegans: WBGene00017013, ensh-1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=1e-25]} {RNA1310_35640.2} {RNA815_23388}

Mlig455_068887 {REF} {Length: 1644} {RNA1509_7417} {RNA1310_35640.1} {RNA815_53151}
22. MligTC455_50666 131 2.72 Mlig455_034548

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_034548 {REF} {Length: 2489} {RNA1310_46048} {RNA815_41927}
23. MligTC455_08996 36 0.74 Mlig455_026604

Neo: -

Age: -

 ANK1 0.954 - - - - - 0.954 Mlig455_026604 {REF} {Length: 3269} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=180.0]; Ankyrin repeat [PF00023.32, score=153.8]; Ankyrin repeats (many copies) [PF13637.8, score=145.9]; Ankyrin repeat [PF13606.8, score=137.9]; Ankyrin repeats (many copies) [PF13857.8, score=125.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=159, Expect=6e-41]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=144, Expect=3e-36]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=143, Expect=4e-36]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=142, Expect=1e-35]; ENSMUSG00000032257, Ankk1, ankyrin repeat and kinase domain containing 1, [Score=138, Expect=2e-34]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=156, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=149, Expect=2e-38]} {Smed: dd_Smed_v6_11663_0_2, dd_Smed_v6_11663_0_2, [Score=132, Expect=5e-33]} {RNA1509_49335} {RNA1310_6702} {RNA815_17045}
24. MligTC455_11926 101 2.11 Mlig455_021319

Neo: -

Age: -

Region-enriched R7: 4.905/0.00107

 0.954 - - - - - 0.954 Mlig455_021319 {REF} {Length: 2758} {Pfam: Mab-21 protein [PF03281.16, score=23.9]} {RNA1509_41055} {RNA1310_11481.1} {RNA815_44675}
25. MligTC455_22849 256 5.34 Mlig455_031095

Neo: -

Age: Down-Up-Up

Regeneration-enriched BL: 4.292
Regeneration-enriched R5: 2.530

 0.952 - - - - - 0.952 Mlig455_031095 {REF} {Length: 1726} {Smed: dd_Smed_v6_7191_0_1, dd_Smed_v6_7191_0_1, [RH, Score=117, Expect=1e-28]} {RNA1509_36152} {RNA1310_7995} {RNA815_32401}
26. MligTC455_48974 124 2.58 Mlig455_055974

Neo: -

Age: -

Regeneration-upregulated BL: 5.064

Regeneration-enriched BL: 5.064

 0.952 - - - - - 0.952 Mlig455_055974 {REF} {Length: 739} {NoTransDecoderORF} {RNA1310_50966} {RNA815_42094}
27. MligTC455_17524 186 3.87 Mlig455_019598

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_019598 {REF} {Length: 2178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=88.0]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_35331} {RNA1310_2795.1} {RNA815_4169}
28. MligTC455_09178 26 0.54 Mlig455_003584

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_003584 {REF} {Length: 2040} {Pfam: Innexin [PF00876.20, score=395.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=123, Expect=3e-31]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [RH, Score=383, Expect=2e-131]} {Smed: dd_Smed_v6_11077_0_1, dd_Smed_v6_11077_0_1, [Score=363, Expect=2e-122]} {RNA1310_17631} {RNA815_17043}
29. MligTC455_42477 108 2.26 Mlig455_050914

Neo: -

Age: Down-Up-Up

 0.95 - - - - 0.950 - Mlig455_050914 {REF} {Length: 2988} {Pfam: Innexin [PF00876.20, score=246.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=76.6, Expect=2e-14]} {Celegans: WBGene00006747, unc-7, Innexin unc-7, [Score=175, Expect=2e-47]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=227, Expect=2e-67]} {RNA1509_26844} {RNA1310_20979} {RNA815_34722}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA