Data search


search
Exact
Search

Results for MligTC455_09410

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09410 41 0.86 Mlig455_002952

Neo: -

Age: -

Mlig455_002952 {REF} {Length: 929} {NoTransDecoderORF}

Cumulative graph for MligTC455_09410

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.108 1.198 0.99986 1.00000
RegionR2 -0.065 1.198 0.61466 0.96126
RegionR3 0.87 1.198 0.43972 0.95608
RegionR4 4.37 1.198 0.02010 0.10254
RegionR5 0.256 1.198 1.00000 1.00000
RegionR6 -1.212 1.198 0.99991 1.00000
RegionR7 -1.486 1.198 1.00000 1.00000
RegionR8 -0.627 1.198 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.426 1.198 0.99992 1.00000
RegenerationR2 1.766 1.198 0.32903 0.76695
RegenerationR3 0.595 1.198 0.76968 0.97145
RegenerationR4 -0.117 1.198 0.89541 1.00000
RegenerationR5 2.498 1.198 0.14833 0.56539
RegenerationR6 1.118 1.198 0.45903 0.77681
RegenerationBL 2.959 1.198 0.21249 0.55671
RegenerationTP 3.339 1.198 0.32013 0.76496


Genes with expression patterns similar to MligTC455_09410

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09410 41 0.86 Mlig455_002952

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_002952 {REF} {Length: 929} {NoTransDecoderORF}
2. MligTC455_13653 607 12.65 Mlig455_005401, Mlig455_005409

Neo: -

Age: -

Region-enriched R4: 4.246/0.02777

2.589 - - 0.952 - 0.775 0.862

Mlig455_005401 {REF} {Length: 648} {NoTransDecoderORF} {RNA1509_12443} {RNA1310_14828.1} {RNA815_80.1}

Mlig455_005409 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_12443} {RNA1310_14828.1}
3. MligTC455_32125 64 1.34 Mlig455_016427

Neo: -

Age: Up-Down-Down

GIPC3 0.998 - - 0.998 - - - Mlig455_016427 {REF} {Length: 2590} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=65.9, Expect=5e-12]} {RNA1509_43362} {RNA1310_20993, RNA1509_43362} {RNA1509_43362, RNA815_24337}
4. MligTC455_33372 113 2.36 Mlig455_068577

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R4: 4.755/0.01170

C3orf38 0.986 - - 0.986 - - - Mlig455_068577 {REF} {Length: 3153} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4518) [PF15008.8, score=89.1]} {Human: ENSG00000179021, C3orf38, chromosome 3 open reading frame 38, [Score=49.7, Expect=4e-06]} {RNA1509_42075} {RNA1310_13576.1, RNA1509_42075} {RNA1509_42075, RNA815_5232}
5. MligTC455_28927 116 2.41 Mlig455_008120

Neo: -

Age: -

Region-enriched R4: 4.710/0.01796

0.974 - - 0.974 - - - Mlig455_008120 {REF} {Length: 3186} {RNA1509_39623} {RNA1310_1374.1} {RNA815_23786}
6. MligTC455_28762 19 0.39 Mlig455_041370

Neo: -

Age: -

Region-enriched R4: 7.422/0.00037

STX1A 0.964 - - 0.964 - - - Mlig455_041370 {REF} {Length: 8366} {Pfam: Syntaxin [PF00804.27, score=198.6]; Pao retrotransposon peptidase [PF05380.15, score=167.0]; Protein of unknown function (DUF1759) [PF03564.17, score=123.2]; Putative peptidase (DUF1758) [PF05585.14, score=65.1]; SNARE domain [PF05739.21, score=63.6]; Family of unknown function (DUF5641) [PF18701.3, score=55.7]; Syntaxin-like protein [PF14523.8, score=28.3]; Aspartyl protease [PF13650.8, score=24.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.7]} {Human: ENSG00000106089, STX1A, syntaxin 1A, [RH, Score=358, Expect=7e-112]; ENSG00000099365, STX1B, syntaxin 1B, [RH, Score=351, Expect=3e-109]} {Mouse: ENSMUSG00000030806, Stx1b, syntaxin 1B, [RH, Score=351, Expect=2e-109]; ENSMUSG00000007207, Stx1a, syntaxin 1A (brain), [RH, Score=348, Expect=1e-108]} {Dmel: FBgn0013343, Syx1A, Syntaxin 1A, [RH, Score=358, Expect=7e-112]} {Celegans: WBGene00006798, unc-64, Syntaxin-1A homolog, [RH, Score=349, Expect=5e-109]} {Smed: dd_Smed_v6_8453_0_2, dd_Smed_v6_8453_0_2, [RH, Score=400, Expect=7e-127]} {RNA1509_13580} {RNA1310_373} {RNA815_2300}
7. MligTC455_35302 716 14.92 Mlig455_043751, Mlig455_047474

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.537

Region-enriched R7: 2.895/0.00066

LPA 0.961 - - - - - 0.961

Mlig455_043751 {REF} {Length: 4818} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=98.4]; MAC/Perforin domain [PF01823.21, score=50.6]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=34.9]} {Human: ENSG00000198670, LPA, lipoprotein(a), [Score=72.4, Expect=7e-12]} {Mouse: ENSMUSG00000038677, Scube3, signal peptide, CUB domain, EGF-like 3, [Score=71.2, Expect=8e-12]} {Dmel: FBgn0031879, uif, uninflatable, [Score=81.6, Expect=6e-15]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=57.4, Expect=1e-07]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=91.7, Expect=9e-20]} {RNA1509_4450} {RNA1310_985} {RNA815_424}

Mlig455_047474 {REF} {Length: 4757} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=98.4]; MAC/Perforin domain [PF01823.21, score=50.6]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=34.9]} {Human: ENSG00000198670, LPA, lipoprotein(a), [Score=72.4, Expect=7e-12]} {Mouse: ENSMUSG00000038677, Scube3, signal peptide, CUB domain, EGF-like 3, [Score=71.2, Expect=8e-12]} {Dmel: FBgn0031879, uif, uninflatable, [Score=81.6, Expect=6e-15]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=57.4, Expect=1e-07]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=91.7, Expect=9e-20]} {RNA1509_4450, RNA1509_56626} {RNA1310_985, RNA1509_56626} {RNA1509_56626, RNA815_424}
8. MligTC455_52670 280 5.84 Mlig455_060776

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.342

DHRS7B 0.961 - - - 0.961 - - Mlig455_060776 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=124.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=90.9]; KR domain [PF08659.12, score=35.4]} {Human: ENSG00000109016, DHRS7B, dehydrogenase/reductase 7B, [RH, Score=192, Expect=1e-58]} {Mouse: ENSMUSG00000042569, Dhrs7b, dehydrogenase/reductase (SDR family) member 7B, [RH, Score=196, Expect=1e-60]} {Dmel: FBgn0027583, CG7601, [RH, Score=207, Expect=1e-64]} {Celegans: WBGene00000993, dhs-30, DeHydrogenases, Short chain, [RH, Score=170, Expect=1e-50]} {Smed: dd_Smed_v6_3512_0_1, dd_Smed_v6_3512_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_32832, RNA1509_37672} {RNA1310_19773, RNA1509_32832, RNA1509_37672} {RNA1509_32832, RNA1509_37672, RNA815_14850}
9. MligTC455_13470 32 0.67 Mlig455_063385

Neo: -

Age: -

0.956 - - 0.956 - - - Mlig455_063385 {REF} {Length: 558} {NoTransDecoderORF} {RNA1310_103865}
10. MligTC455_06495 43 0.9 Mlig455_010655, Mlig455_070273

Neo: -

Age: Down-Down-Up

0.952 - - 0.952 - - -

Mlig455_010655 {REF} {Length: 1719} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.5]; Integrase core domain [PF00665.28, score=52.1]; Integrase core domain [PF13683.8, score=20.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.1, Expect=5e-09]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=129, Expect=2e-33]} {RNA1509_40241, RNA1509_40440} {RNA1310_33355, RNA1509_40440} {RNA1509_40440, RNA815_16066}

Mlig455_070273 {REF} {Length: 1515} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.9]; Integrase core domain [PF00665.28, score=49.7]; Integrase core domain [PF13683.8, score=19.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=128, Expect=5e-33]} {RNA1509_40241} {RNA1310_33355} {RNA815_16066}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA