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Results for MligTC455_06495

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06495 43 0.90 Mlig455_010655, Mlig455_070273

Neo: -

Age: Down-Down-Up

Mlig455_010655 {REF} {Length: 1719} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.5]; Integrase core domain [PF00665.28, score=52.1]; Integrase core domain [PF13683.8, score=20.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.1, Expect=5e-09]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=129, Expect=2e-33]} {RNA1509_40241, RNA1509_40440} {RNA1310_33355, RNA1509_40440} {RNA1509_40440, RNA815_16066}

Mlig455_070273 {REF} {Length: 1515} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.9]; Integrase core domain [PF00665.28, score=49.7]; Integrase core domain [PF13683.8, score=19.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=128, Expect=5e-33]} {RNA1509_40241} {RNA1310_33355} {RNA815_16066}

Cumulative graph for MligTC455_06495

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -11.879 1.116 0.99953 1.00000
RegionR2 5.892 1.116 0.01082 0.10584
RegionR3 5.432 1.116 0.01273 0.17874
RegionR4 2.665 1.116 0.01912 0.09881
RegionR5 3.439 1.116 0.09291 0.29047
RegionR6 1.632 1.116 1.00000 1.00000
RegionR7 -0.264 1.116 1.00000 1.00000
RegionR8 -6.917 1.116 0.99979 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.407 1.116 1.00000 1.00000
RegenerationR2 0.468 1.116 0.80208 0.99064
RegenerationR3 -0.025 1.116 0.89292 1.00000
RegenerationR4 0.727 1.116 0.41908 0.82527
RegenerationR5 0.587 1.116 0.50246 0.85979
RegenerationR6 3.323 1.116 0.05445 0.29230
RegenerationBL 3.18 1.116 0.29464 0.65700
RegenerationTP 5.111 1.116 0.05163 0.37220


Genes with expression patterns similar to MligTC455_06495

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06495 43 0.9 Mlig455_010655, Mlig455_070273

Neo: -

Age: Down-Down-Up

 3 - 1.000 1.000 - 1.000 -

Mlig455_010655 {REF} {Length: 1719} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.5]; Integrase core domain [PF00665.28, score=52.1]; Integrase core domain [PF13683.8, score=20.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.1, Expect=5e-09]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=129, Expect=2e-33]} {RNA1509_40241, RNA1509_40440} {RNA1310_33355, RNA1509_40440} {RNA1509_40440, RNA815_16066}

Mlig455_070273 {REF} {Length: 1515} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.9]; Integrase core domain [PF00665.28, score=49.7]; Integrase core domain [PF13683.8, score=19.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=128, Expect=5e-33]} {RNA1509_40241} {RNA1310_33355} {RNA815_16066}
2. MligTC455_10711 32 0.67 Mlig455_001819, Mlig455_001825, Mlig455_001826

Neo: -

Age: -

Region-enriched R4: 5.120/0.01016

 RTL1 0.996 - - 0.996 - - -

Mlig455_001819 {REF} {Length: 3698} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187}

Mlig455_001825 {REF} {Length: 350} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]} {RNA1509_18694} {RNA1310_109.1} {RNA815_187}

Mlig455_001826 {REF} {Length: 1568} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187}
3. MligTC455_13470 32 0.67 Mlig455_063385

Neo: -

Age: -

 0.994 - - 0.994 - - - Mlig455_063385 {REF} {Length: 558} {NoTransDecoderORF} {RNA1310_103865}
4. MligTC455_31558 61 1.26 Mlig455_029249, Mlig455_048836, Mlig455_050353

Neo: -

Age: -

 0.993 - - 0.993 - - -

Mlig455_029249 {REF} {Length: 1494} {NoTransDecoderORF} {RNA1509_17564} {RNA1310_32764} {RNA815_47530.2}

Mlig455_048836 {REF} {Length: 1672} {NoTransDecoderORF} {RNA1509_28242} {RNA1310_32764} {RNA815_11419.1}

Mlig455_050353 {REF} {Length: 890} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17564} {RNA1310_32764} {RNA815_11419.1}
5. MligTC455_28762 19 0.39 Mlig455_041370

Neo: -

Age: -

Region-enriched R4: 7.422/0.00037

 STX1A 0.982 - - 0.982 - - - Mlig455_041370 {REF} {Length: 8366} {Pfam: Syntaxin [PF00804.27, score=198.6]; Pao retrotransposon peptidase [PF05380.15, score=167.0]; Protein of unknown function (DUF1759) [PF03564.17, score=123.2]; Putative peptidase (DUF1758) [PF05585.14, score=65.1]; SNARE domain [PF05739.21, score=63.6]; Family of unknown function (DUF5641) [PF18701.3, score=55.7]; Syntaxin-like protein [PF14523.8, score=28.3]; Aspartyl protease [PF13650.8, score=24.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.7]} {Human: ENSG00000106089, STX1A, syntaxin 1A, [RH, Score=358, Expect=7e-112]; ENSG00000099365, STX1B, syntaxin 1B, [RH, Score=351, Expect=3e-109]} {Mouse: ENSMUSG00000030806, Stx1b, syntaxin 1B, [RH, Score=351, Expect=2e-109]; ENSMUSG00000007207, Stx1a, syntaxin 1A (brain), [RH, Score=348, Expect=1e-108]} {Dmel: FBgn0013343, Syx1A, Syntaxin 1A, [RH, Score=358, Expect=7e-112]} {Celegans: WBGene00006798, unc-64, Syntaxin-1A homolog, [RH, Score=349, Expect=5e-109]} {Smed: dd_Smed_v6_8453_0_2, dd_Smed_v6_8453_0_2, [RH, Score=400, Expect=7e-127]} {RNA1509_13580} {RNA1310_373} {RNA815_2300}
6. MligTC455_51853 199 4.14 Mlig455_054082

Neo: Irradiation

Age: -

Region-specific R4: 5.032

Region-enriched R4: 4.280/0.00000

Regeneration-downregulated R4: -2.554

Regeneration-depleted R4: -2.554

 0.971 - - - - 0.971 - Mlig455_054082 {REF} {Length: 2433} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.7]; MFS/sugar transport protein [PF13347.8, score=49.3]; MFS_1 like family [PF12832.9, score=36.5]; PUCC protein [PF03209.17, score=35.8]; Sugar (and other) transporter [PF00083.26, score=25.9]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_53540} {RNA1310_30811.1, RNA1509_53540} {RNA1509_53540, RNA815_24118}
7. MligTC455_10117 32 0.66 Mlig455_038309

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_038309 {REF} {Length: 362} {NoTransDecoderORF} {RNA1509_50858} {RNA1310_46223} {RNA815_38435}
8. MligTC455_22222 22 0.46 Mlig455_003016, Mlig455_003221

Neo: -

Age: -

Region-enriched R4: 4.417/0.01034

 0.964 - - - - 0.964 -

Mlig455_003016 {REF} {Length: 1450} {RNA1509_42625} {RNA1310_49270} {RNA815_41227}

Mlig455_003221 {REF} {Length: 1447} {TRANSSPLICED} {RNA1509_56376} {RNA1310_49270} {RNA815_32504}
9. MligTC455_26140 53 1.11 Mlig455_009901, Mlig455_009903

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 4.764/0.00706

 0.962 - - 0.962 - - -

Mlig455_009901 {REF} {Length: 1856} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=129, Expect=1e-34]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}

Mlig455_009903 {REF} {Length: 1723} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=9e-35]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2}
10. MligTC455_32125 64 1.34 Mlig455_016427

Neo: -

Age: Up-Down-Down

 GIPC3 0.962 - - 0.962 - - - Mlig455_016427 {REF} {Length: 2590} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=65.9, Expect=5e-12]} {RNA1509_43362} {RNA1310_20993, RNA1509_43362} {RNA1509_43362, RNA815_24337}
11. MligTC455_51448 183 3.8 Mlig455_059866

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_059866 {REF} {Length: 131} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7529} {RNA1310_139907}
12. MligTC455_38701 102 2.13 Mlig455_015653, Mlig455_023761

Neo: -

Age: -

 ANK1, FPGT-TNNI3K 0.953 - - 0.953 - - -

Mlig455_015653 {REF} {Length: 5454} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=72.8]; Ankyrin repeats (many copies) [PF13857.8, score=71.0]; Ankyrin repeats (many copies) [PF13637.8, score=55.5]; Ankyrin repeat [PF00023.32, score=54.3]; Ankyrin repeat [PF13606.8, score=41.5]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=72.0, Expect=2e-15]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=70.1, Expect=3e-15]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=68.6, Expect=3e-14]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=74.7, Expect=1e-16]} {Dmel: FBgn0261554, CG42672, [Score=63.9, Expect=5e-13]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-18]} {RNA1509_28959} {RNA1310_10537} {RNA815_15195}

Mlig455_023761 {REF} {Length: 3109} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.7]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeats (many copies) [PF13637.8, score=57.1]; Ankyrin repeat [PF13606.8, score=46.0]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]; Mab-21 protein [PF03281.16, score=25.8]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=77.8, Expect=2e-14]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=77.4, Expect=3e-14]; ENSG00000029534, ANK1, ankyrin 1, [Score=75.9, Expect=1e-13]; ENSG00000151150, ANK3, ankyrin 3, [Score=75.1, Expect=2e-13]; ENSG00000085382, HACE1, HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, [Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=82.4, Expect=5e-16]} {Dmel: FBgn0031473, CG3104, [Score=82.4, Expect=5e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-15]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
13. MligTC455_09410 41 0.86 Mlig455_002952

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_002952 {REF} {Length: 929} {NoTransDecoderORF}
14. MligTC455_02440 25 0.51 Mlig455_007726, Mlig455_007738

Neo: -

Age: Up-Down-Up

 0.95 - 0.950 - - - -

Mlig455_007726 {REF} {Length: 1301} {RNA1310_37266} {RNA815_21933}

Mlig455_007738 {REF} {Length: 3651} {RNA1310_37266} {RNA815_21933}

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