M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09820

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09820 12 0.26 Mlig455_038000

Neo: Int S/G2/M

Age: -

 Mlig455_038000 {REF} {Length: 896} {NoTransDecoderORF} {RNA1310_107689} {RNA815_30599}

Cumulative graph for MligTC455_09820

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.859 0.702 0.99960 1.00000
RegionR2 -0.982 0.702 0.99990 1.00000
RegionR3 0.826 0.702 0.99998 1.00000
RegionR4 1.389 0.702 0.99987 1.00000
RegionR5 1.45 0.702 0.99988 1.00000
RegionR6 0.21 0.702 0.99992 1.00000
RegionR7 -0.404 0.702 0.99997 1.00000
RegionR8 -0.631 0.702 0.99982 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.352 0.702 0.99995 1.00000
RegenerationR2 3.018 0.702 0.15017 0.58326
RegenerationR3 -0.066 0.702 0.28721 0.71919
RegenerationR4 1.749 0.702 0.10781 0.50593
RegenerationR5 1.211 0.702 0.16531 0.59090
RegenerationR6 1.91 0.702 0.19192 0.53071
RegenerationBL -0.865 0.702 0.99997 1.00000
RegenerationTP -0.453 0.702 0.99995 1.00000


Genes with expression patterns similar to MligTC455_09820

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09820 12 0.26 Mlig455_038000

Neo: Int S/G2/M

Age: -

 2 - - - 1.000 1.000 - Mlig455_038000 {REF} {Length: 896} {NoTransDecoderORF} {RNA1310_107689} {RNA815_30599}
2. MligTC455_42736 407 8.48 Mlig455_003009, Mlig455_036418, Mlig455_054591

Neo: -

Age: -

 1.701 - - - 0.750 0.951 -

Mlig455_003009 {REF} {Length: 2844} {RNA1509_52803} {RNA1310_21149.1, RNA1509_52803} {RNA1509_52803, RNA815_36125.1}

Mlig455_036418 {REF} {Length: 1808} {RNA1509_52803} {RNA1310_21149.1} {RNA815_36125.1}

Mlig455_054591 {REF} {Length: 1603} {RNA1509_52803} {RNA1310_21149.1} {RNA815_36125.1}
3. MligTC455_35426 27 0.55 Mlig455_043708, Mlig455_043796, Mlig455_047447

Neo: -

Age: -

Region-enriched R4: 3.107/0.04694

 COG2, TRAF3, TRAF6 1.666 - - - 0.705 0.961 -

Mlig455_043708 {REF} {Length: 2314} {Pfam: TRAF-type zinc finger [PF02176.20, score=41.5]; Seven in absentia protein family [PF03145.18, score=23.6]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=161, Expect=1e-41]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=158, Expect=6e-41]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=69.3, Expect=4e-12]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=103, Expect=2e-23]} {RNA1509_50896} {RNA1310_6468} {RNA815_1472}

Mlig455_043796 {REF} {Length: 4177} {TRANSSPLICED} {Pfam: COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=104.6]; Domain of unknown function (DUF3510) [PF12022.10, score=94.3]; TRAF-type zinc finger [PF02176.20, score=30.8]} {Human: ENSG00000135775, COG2, component of oligomeric golgi complex 2, [Score=280, Expect=6e-80]} {Mouse: ENSMUSG00000031979, Cog2, component of oligomeric golgi complex 2, [Score=274, Expect=5e-78]} {Dmel: FBgn0026634, ldlCp, ldlCp-related protein, [Score=196, Expect=5e-52]} {Celegans: WBGene00000585, cogc-2, Conserved oligomeric Golgi complex subunit 2, [Score=132, Expect=3e-31]} {Smed: dd_Smed_v6_5210_0_1, dd_Smed_v6_5210_0_1, [Score=276, Expect=9e-79]} {RNA1509_17078} {RNA1310_5891} {RNA815_1472}

Mlig455_047447 {REF} {Length: 1314} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=34.2]; Seven in absentia protein family [PF03145.18, score=19.2]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.7, Expect=4e-21]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=100, Expect=4e-23]} {RNA1509_12449} {RNA1310_8751} {RNA815_1472}
4. MligTC455_54275 30 0.63 Mlig455_017654

Neo: -

Age: -

 CHRM5 0.983 - - - - 0.983 - Mlig455_017654 {REF} {Length: 2293} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=252.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=44.3]; Olfactory receptor [PF13853.8, score=21.1]} {Human: ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [RH, Score=213, Expect=9e-61]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=226, Expect=4e-65]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=214, Expect=1e-59]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=217, Expect=4e-62]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=221, Expect=4e-64]} {RNA1310_22334} {RNA815_30775}
5. MligTC455_25077 91 1.89 Mlig455_041895, Mlig455_041977

Neo: -

Age: Up-Down-Up

 0.979 - - - - 0.979 -

Mlig455_041895 {REF} {Length: 3255} {tRNA: Val(CAC),pseudo, score=24.7} {RNA1509_40878} {RNA1310_11170.1, RNA1509_40878} {RNA1509_40878, RNA815_18058.2}

Mlig455_041977 {REF} {Length: 2618} {tRNA: Val(CAC),pseudo, score=25.5} {RNA1509_40878} {RNA1310_11170.1} {RNA815_18058.2}
6. MligTC455_49500 20 0.42 Mlig455_015875

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_015875 {REF} {Length: 4033} {RNA1509_40957} {RNA1310_5450.1} {RNA815_16253.1}
7. MligTC455_28766 46 0.95 Mlig455_041904

Neo: -

Age: -

Region-enriched R6: 3.641/0.01524

 PTRHD1 0.977 - - - - 0.977 - Mlig455_041904 {REF} {Length: 2121} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=84.9]} {Human: ENSG00000184924, PTRHD1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=103, Expect=3e-29]} {Mouse: ENSMUSG00000096199, Ptrhd1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=107, Expect=6e-31]} {Dmel: FBgn0038446, CG14903, [RH, Score=140, Expect=2e-44]} {Celegans: WBGene00050885, Y94H6A.12, [RH, Score=122, Expect=5e-37]} {Smed: dd_Smed_v6_6409_0_1, dd_Smed_v6_6409_0_1, [RH, Score=127, Expect=4e-39]} {RNA1509_51707} {RNA1310_42234} {RNA815_30800}
8. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.976 - - - - 0.976 - Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
9. MligTC455_11146 70 1.46 Mlig455_068743

Neo: -

Age: Down-Up-Down

 C11orf65 0.972 - - - - 0.972 - Mlig455_068743 {REF} {Length: 1750} {Human: ENSG00000166323, C11orf65, chromosome 11 open reading frame 65, [RH, Score=226, Expect=4e-72]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [RH, Score=214, Expect=2e-67]} {Smed: dd_Smed_v6_13591_0_1, dd_Smed_v6_13591_0_1, [RH, Score=237, Expect=9e-77]} {RNA1310_22540.1} {RNA815_13464}
10. MligTC455_18549 35 0.72 Mlig455_003836

Neo: -

Age: Up-Down-Down

 0.972 - - - - 0.972 - Mlig455_003836 {REF} {Length: 1990} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1}
11. MligTC455_54060 17 0.36 Mlig455_052757

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_052757 {REF} {Length: 4715} {RNA1310_25388} {RNA815_43889}
12. MligTC455_07720 6 0.12 Mlig455_061015

Neo: -

Age: -

 ZIC5 0.971 - - - - 0.971 - Mlig455_061015 {REF} {Length: 576} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=39.1]; Zinc-finger double domain [PF13465.8, score=33.8]; C2H2-type zinc finger [PF13894.8, score=24.2]} {Human: ENSG00000139800, ZIC5, Zic family member 5, [Score=97.1, Expect=7e-25]; ENSG00000174963, ZIC4, Zic family member 4, [Score=95.5, Expect=1e-24]; ENSG00000156925, ZIC3, Zic family member 3, [Score=95.1, Expect=3e-24]; ENSG00000043355, ZIC2, Zic family member 2, [Score=94.7, Expect=5e-24]; ENSG00000152977, ZIC1, Zic family member 1, [Score=93.6, Expect=8e-24]} {Mouse: ENSMUSG00000041703, Zic5, zinc finger protein of the cerebellum 5, [Score=97.1, Expect=5e-25]; ENSMUSG00000036972, Zic4, zinc finger protein of the cerebellum 4, [Score=95.5, Expect=5e-25]; ENSMUSG00000067860, Zic3, zinc finger protein of the cerebellum 3, [Score=95.1, Expect=1e-25]; ENSMUSG00000061524, Zic2, zinc finger protein of the cerebellum 2, [Score=94.7, Expect=3e-24]; ENSMUSG00000032368, Zic1, zinc finger protein of the cerebellum 1, [Score=93.6, Expect=5e-24]} {Dmel: FBgn0003002, opa, odd paired, [Score=96.7, Expect=5e-25]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=93.2, Expect=1e-24]} {Smed: dd_Smed_v6_22585_0_1, dd_Smed_v6_22585_0_1, [Score=100, Expect=8e-27]} {RNA1310_23362} {RNA815_19034}
13. MligTC455_57697 4 0.08 Mlig455_008943

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_008943 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_54240} {RNA1310_47176} {RNA815_26049}
14. MligTC455_11644 18 0.37 Mlig455_034785

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_034785 {REF} {Length: 982} {NoTransDecoderORF}
15. MligTC455_29878 24 0.49 Mlig455_032877

Neo: -

Age: -

 PKDREJ 0.97 - - - - 0.970 - Mlig455_032877 {REF} {Length: 2692} {Pfam: REJ domain [PF02010.17, score=190.5]; Polycystin cation channel [PF08016.14, score=164.6]; Ion transport protein [PF00520.33, score=37.9]; PLAT/LH2 domain [PF01477.25, score=29.6]; PKD domain [PF00801.22, score=29.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=171, Expect=1e-41]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=146, Expect=2e-34]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=140, Expect=2e-32]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=68.2, Expect=7e-11]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=249, Expect=7e-66]} {RNA1310_24455} {RNA815_11208}
16. MligTC455_08635 33 0.69 Mlig455_041022, Mlig455_041189

Neo: -

Age: -

 0.969 - - - - 0.969 -

Mlig455_041022 {REF} {Length: 1305} {RNA1509_53357} {RNA1310_12881} {RNA815_27630}

Mlig455_041189 {REF} {Length: 1255} {RNA1509_53357} {RNA1310_12881} {RNA815_27630}
17. MligTC455_17255 12 0.24 Mlig455_013836

Neo: -

Age: Up-Down-Up

 0.969 - - - - 0.969 - Mlig455_013836 {REF} {Length: 3587} {TRANSSPLICED} {RNA1509_17462, RNA1509_24953} {RNA1310_485.1, RNA1509_24953} {RNA1509_24953, RNA815_2772.1}
18. MligTC455_14860 14 0.3 Mlig455_033599

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_033599 {REF} {Length: 1075} {NoTransDecoderORF} {RNA1509_32111} {RNA1310_130308} {RNA815_53107.2}
19. MligTC455_38354 15 0.31 Mlig455_058596

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_058596 {REF} {Length: 1131} {NoTransDecoderORF} {RNA1310_139293} {RNA815_39449.2}
20. MligTC455_43324 71 1.47 Mlig455_041984

Neo: -

Age: -

Region-enriched R2: 6.623/0.00573

 0.967 - - - - 0.967 - Mlig455_041984 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_49821} {RNA1310_52560.2} {RNA815_59873}
21. MligTC455_43961 30 0.62 Mlig455_027626

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_027626 {REF} {Length: 602} {Pfam: PAN domain [PF00024.28, score=26.5]; PAN domain [PF14295.8, score=21.8]} {RNA1310_35396.1} {RNA815_23500}
22. MligTC455_38500 357 7.43 Mlig455_022541, Mlig455_022582

Neo: -

Age: Down-Up-Down

 0.966 - - - - 0.966 -

Mlig455_022541 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_49815, RNA1509_55125} {RNA1310_51594, RNA1509_49815} {RNA1509_49815, RNA815_9959.1}

Mlig455_022582 {REF} {Length: 1139} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_24875, RNA1509_55125} {RNA1310_51594, RNA1509_24875} {RNA1509_24875, RNA815_9959.1}
23. MligTC455_10351 12 0.25 Mlig455_058454

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_058454 {REF} {Length: 1338} {RNA1310_148920}
24. MligTC455_18487 36 0.75 Mlig455_004379

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_004379 {REF} {Length: 1362} {RNA1310_54189}
25. MligTC455_10249 19 0.41 Mlig455_012726

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_012726 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_2860} {RNA1310_58348} {RNA815_55323}
26. MligTC455_45743 14 0.28 Mlig455_003386

Neo: -

Age: Down-Up-Down

 SLC22A5 0.964 - - - - 0.964 - Mlig455_003386 {REF} {Length: 2565} {Pfam: Sugar (and other) transporter [PF00083.26, score=107.9]; Major Facilitator Superfamily [PF07690.18, score=74.6]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=259, Expect=7e-79]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=250, Expect=1e-75]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=258, Expect=1e-78]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=249, Expect=1e-75]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=268, Expect=9e-83]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=225, Expect=3e-66]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=181, Expect=2e-50]} {RNA1509_11765} {RNA1310_12725.1} {RNA815_4270}
27. MligTC455_50518 10 0.21 Mlig455_030197

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_030197 {REF} {Length: 3644} {Pfam: Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF13650.8, score=25.1]; Retroviral aspartyl protease [PF00077.22, score=20.5]; Integrase core domain [PF13683.8, score=20.4]; Domain of unknown function (DUF4537) [PF15057.8, score=20.4]} {Celegans: WBGene00019335, K02F6.1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_3718_0_1, dd_Smed_v6_3718_0_1, [Score=81.3, Expect=5e-16]} {RNA1509_37281} {RNA1310_6533.1} {RNA815_14259}
28. MligTC455_56840 7 0.15 Mlig455_012947

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_012947 {REF} {Length: 4} {NoTransDecoderORF}
29. MligTC455_38235 38 0.8 Mlig455_021198

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_021198 {REF} {Length: 736} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978}
30. MligTC455_54157 234 4.88 Mlig455_058424

Neo: -

Age: -

 PPP1R36 0.963 - - - - 0.963 - Mlig455_058424 {REF} {Length: 2441} {Pfam: Protein phosphatase 1 inhibitor [PF14895.8, score=139.0]} {Human: ENSG00000165807, PPP1R36, protein phosphatase 1 regulatory subunit 36, [RH, Score=191, Expect=1e-55]} {Mouse: ENSMUSG00000052221, Ppp1r36, protein phosphatase 1, regulatory subunit 36, [RH, Score=167, Expect=5e-47]} {RNA1509_6292} {RNA1310_2911.1} {RNA815_5971.1}
31. MligTC455_05081 10 0.2 Mlig455_004977

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_004977 {REF} {Length: 769} {NoTransDecoderORF} {RNA1310_99788} {RNA815_6347.1}
32. MligTC455_41136 45 0.95 Mlig455_045642

Neo: -

Age: logFC(26M/2M)=-0.512

 0.962 - - - - 0.962 - Mlig455_045642 {REF} {Length: 2388} {TRANSSPLICED} {Smed: dd_Smed_v6_5949_0_1, dd_Smed_v6_5949_0_1, [RH, Score=53.9, Expect=8e-08]} {RNA1509_13096} {RNA1310_7276} {RNA815_2555}
33. MligTC455_06768 12 0.25 Mlig455_009616

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_009616 {REF} {Length: 322} {NoTransDecoderORF}
34. MligTC455_42918 220 4.59 Mlig455_035176

Neo: -

Age: -

 KCNK9 0.961 - - - - 0.961 - Mlig455_035176 {REF} {Length: 1722} {Pfam: Ion channel [PF07885.18, score=90.6]; Ion transport protein [PF00520.33, score=21.3]} {Human: ENSG00000169427, KCNK9, potassium two pore domain channel subfamily K member 9, [Score=82.0, Expect=4e-17]} {Mouse: ENSMUSG00000036760, Kcnk9, potassium channel, subfamily K, member 9, [Score=84.0, Expect=6e-18]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=98.6, Expect=4e-23]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.7, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [RH, Score=94.0, Expect=2e-22]} {RNA1509_37947} {RNA1310_32556} {RNA815_14264}
35. MligTC455_43115 12 0.25 Mlig455_011719

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_011719 {REF} {Length: 1831} {RNA1310_81493} {RNA815_42582}
36. MligTC455_47639 256 5.34 Mlig455_046133

Neo: -

Age: -

 USF2 0.961 - - - - 0.961 - Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684}
37. MligTC455_47838 4 0.07 Mlig455_045335

Neo: -

Age: -

 SLC8A1 0.961 - - - - 0.961 - Mlig455_045335 {REF} {Length: 3293} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=162.5]; Calx-beta domain [PF03160.16, score=108.0]} {Human: ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=426, Expect=1e-134]; ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=422, Expect=2e-133]} {Mouse: ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=424, Expect=5e-134]; ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [Score=416, Expect=3e-131]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=409, Expect=3e-128]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=384, Expect=7e-119]} {Celegans: WBGene00003566, ncx-1, Na/Ca eXchangers; Sodium-calcium exchanger, [Score=395, Expect=1e-123]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=385, Expect=6e-120]} {RNA1509_15759, RNA1509_50628} {RNA1310_3942.1, RNA1509_15759, RNA1509_50628} {RNA1509_15759, RNA1509_50628, RNA815_1046.1}
38. MligTC455_06090 223 4.65 Mlig455_037743

Neo: -

Age: Down-Up-Up

 0.96 - - - - 0.960 - Mlig455_037743 {REF} {Length: 1087} {RNA1509_10108} {RNA1310_12853.1} {RNA815_29647}
39. MligTC455_17029 11 0.23 Mlig455_048813

Neo: -

Age: logFC(26M/2M)=-0.322

 MBNL2 0.96 - - - - 0.960 - Mlig455_048813 {REF} {Length: 3646} {Human: ENSG00000139793, MBNL2, muscleblind like splicing regulator 2, [RH, Score=135, Expect=4e-36]; ENSG00000076770, MBNL3, muscleblind like splicing regulator 3, [RH, Score=133, Expect=8e-36]; ENSG00000152601, MBNL1, muscleblind like splicing regulator 1, [RH, Score=131, Expect=1e-34]} {Mouse: ENSMUSG00000022139, Mbnl2, muscleblind like splicing factor 2, [RH, Score=135, Expect=2e-36]; ENSMUSG00000036109, Mbnl3, muscleblind like splicing factor 3, [RH, Score=135, Expect=1e-36]} {Dmel: FBgn0265487, mbl, muscleblind, [Score=150, Expect=8e-44]} {Celegans: WBGene00019347, mbl-1, Muscleblind-like protein, [RH, Score=146, Expect=4e-41]} {Smed: dd_Smed_v6_7489_0_2, dd_Smed_v6_7489_0_2, [RH, Score=164, Expect=7e-47]} {RNA1509_23214} {RNA1310_25976} {RNA815_17782}
40. MligTC455_29489 117 2.44 Mlig455_018379

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=-0.551

 0.96 - - - - 0.960 - Mlig455_018379 {REF} {Length: 3107} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.2]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_59696} {RNA1310_12293.2, RNA1509_59696} {RNA1509_59696, RNA815_9107.2}
41. MligTC455_02438 147 3.06 Mlig455_003956, Mlig455_027591, Mlig455_039496, Mlig455_054510

Neo: -

Age: Down-Up-Down

 PGBD4 0.959 - - - - 0.959 -

Mlig455_003956 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_37400} {RNA1310_2776}

Mlig455_027591 {REF} {Length: 409} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}

Mlig455_039496 {REF} {Length: 2868} {Pfam: Transposase IS4 [PF13843.8, score=210.5]; Transposase DDE domain [PF01609.23, score=18.8]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=173, Expect=1e-46]} {Smed: dd_Smed_v6_48522_0_1, dd_Smed_v6_48522_0_1, [Score=108, Expect=1e-26]} {RNA1509_28307, RNA1509_37400} {RNA1310_2776, RNA1509_28307, RNA1509_37400} {RNA1509_28307, RNA1509_37400, RNA815_26100}

Mlig455_054510 {REF} {Length: 581} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}
42. MligTC455_10704 11 0.24 Mlig455_011667

Neo: -

Age: Up-Down-Down

 0.959 - - - - 0.959 - Mlig455_011667 {REF} {Length: 1499} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=28.2]; Aspartyl protease [PF13650.8, score=20.0]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
43. MligTC455_11470 27 0.57 Mlig455_029491, Mlig455_029511

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.087

 KIAA1958 0.959 - - - - 0.959 -

Mlig455_029491 {REF} {Length: 3807} {RNA1509_9734} {RNA1310_54822} {RNA815_42052}

Mlig455_029511 {REF} {Length: 2220} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=67.7]; SH3 domain [PF17902.3, score=34.1]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [RH, Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=51.6, Expect=2e-06]} {RNA1509_6477} {RNA1310_54822} {RNA815_2208}
44. MligTC455_11978 125 2.6 Mlig455_025347, Mlig455_025403, Mlig455_040335, Mlig455_055958

Neo: -

Age: Down-Up-Down

Regeneration-upregulated R2: 4.813

Regeneration-enriched R2: 4.813

 0.959 - - - - 0.959 -

Mlig455_025347 {REF} {Length: 1275} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1}

Mlig455_025403 {REF} {Length: 1694} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1}

Mlig455_040335 {REF} {Length: 1691} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1}

Mlig455_055958 {REF} {Length: 1538} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1}
45. MligTC455_29947 41 0.86 Mlig455_016740

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_016740 {REF} {Length: 2180} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=67.8, Expect=7e-12]} {RNA1509_31401} {RNA1310_3059.1} {RNA815_7477.1}
46. MligTC455_50039 12 0.24 Mlig455_051694

Neo: -

Age: logFC(26M/2M)=2.792

 0.959 - - - - 0.959 - Mlig455_051694 {REF} {Length: 2204} {TRANSSPLICED} {RNA1310_42392} {RNA815_12871}
47. MligTC455_09873 12 0.25 Mlig455_020811

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_020811 {REF} {Length: 742} {NoTransDecoderORF}
48. MligTC455_19791 6 0.13 Mlig455_011291

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_011291 {REF} {Length: 1008} {NoTransDecoderORF} {RNA1509_14401} {RNA1310_29512} {RNA815_34442}
49. MligTC455_22415 512 10.67 Mlig455_008652, Mlig455_069418

Neo: -

Age: -

 RAB1A, RAB1B 0.958 - - - - 0.958 -

Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567}

Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567}
50. MligTC455_35390 26 0.55 Mlig455_057716

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_057716 {REF} {Length: 968} {RNA1509_20249} {RNA1310_59950} {RNA815_22594}
51. MligTC455_43323 33 0.69 Mlig455_041907

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.308

 0.958 - - - - 0.958 - Mlig455_041907 {REF} {Length: 2031} {RNA1509_49821} {RNA1310_22780, RNA1509_49821} {RNA1509_49821, RNA815_9762}
52. MligTC455_48455 161 3.36 Mlig455_042005

Neo: -

Age: logFC(26M/2M)=-0.488

 CCDC154 0.958 - - - - 0.958 - Mlig455_042005 {REF} {Length: 3899} {Pfam: Coiled-coil domain-containing protein 154 [PF15450.8, score=125.4]} {Human: ENSG00000197599, CCDC154, coiled-coil domain containing 154, [RH, Score=122, Expect=5e-28]} {Mouse: ENSMUSG00000059562, Ccdc154, coiled-coil domain containing 154, [RH, Score=114, Expect=1e-25]} {Dmel: FBgn0002526, LanA, Laminin A, [Score=50.4, Expect=7e-06]} {Celegans: WBGene00016032, C24A3.1, [RH, Score=65.9, Expect=7e-11]} {Smed: dd_Smed_v6_10236_0_1, dd_Smed_v6_10236_0_1, [RH, Score=450, Expect=1e-146]} {RNA1509_5383} {RNA1310_2073.1} {RNA815_2050}
53. MligTC455_52292 114 2.37 Mlig455_018142

Neo: -

Age: Down-Up-Down

 0.958 - - - - 0.958 - Mlig455_018142 {REF} {Length: 3358} {RNA1509_41463} {RNA1310_26044.1} {RNA815_6737}
54. MligTC455_15948 25 0.51 Mlig455_007630

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_007630 {REF} {Length: 1759} {Pfam: WSC domain [PF01822.21, score=54.5]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=52.4, Expect=2e-07]} {RNA1509_57286} {RNA1310_33352.2} {RNA815_14158.1}
55. MligTC455_06956 10 0.21 Mlig455_015248

Neo: -

Age: Down-Down-Up

 WDR31 0.956 - - - - 0.956 - Mlig455_015248 {REF} {Length: 2016} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.8]} {Human: ENSG00000148225, WDR31, WD repeat domain 31, [Score=177, Expect=6e-50]} {Mouse: ENSMUSG00000028391, Wdr31, WD repeat domain 31, [Score=170, Expect=1e-47]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [Score=56.2, Expect=3e-08]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-46]} {Smed: dd_Smed_v6_10263_0_1, dd_Smed_v6_10263_0_1, [RH, Score=160, Expect=1e-44]} {RNA1509_37630} {RNA1310_25250.2} {RNA815_12696}
56. MligTC455_03172 25 0.52 Mlig455_016132, Mlig455_036881

Neo: -

Age: Down-Up-Down

 0.955 - - - - 0.955 -

Mlig455_016132 {REF} {Length: 1316} {NoTransDecoderORF} {RNA1509_8439} {RNA1310_1034.2} {RNA815_62940}

Mlig455_036881 {REF} {Length: 2951} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}
57. MligTC455_08532 28 0.59 Mlig455_040448

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_040448 {REF} {Length: 1421} {RNA1310_41426} {RNA815_34740}
58. MligTC455_45776 15 0.31 Mlig455_038488

Neo: -

Age: Up-Down-Up

 RTL1 0.955 - - - - 0.955 - Mlig455_038488 {REF} {Length: 4548} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.9]; Integrase zinc binding domain [PF17921.3, score=67.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.3]; Integrase core domain [PF00665.28, score=46.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.4]; Zinc knuckle [PF00098.25, score=22.7]; Aspartyl protease [PF09668.12, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=4e-13]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=289, Expect=3e-81]} {RNA1310_22154.1} {RNA815_10995}
59. MligTC455_01508 2 0.05 Mlig455_070536

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_070536 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_29214}
60. MligTC455_01792 9 0.19 Mlig455_012711

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_012711 {REF} {Length: 590} {NoTransDecoderORF}
61. MligTC455_07982 16 0.34 Mlig455_028741

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_028741 {REF} {Length: 1430} {Dmel: FBgn0085446, CG34417, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00009362, F33E2.6, [Score=57.0, Expect=1e-08]} {RNA1509_44411} {RNA1310_56745} {RNA815_14439.1}
62. MligTC455_10617 423 8.82 Mlig455_023363, Mlig455_068941

Neo: Irradiation

Age: -

Region-specific R4: 6.593

Region-enriched R4: 3.320/0.01596

 0.954 - - - - 0.954 -

Mlig455_023363 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}

Mlig455_068941 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}
63. MligTC455_22851 17 0.35 Mlig455_032044, Mlig455_033467

Neo: Germline

Age: -

 0.954 - - - - 0.954 -

Mlig455_032044 {REF} {Length: 2628} {RNA1509_14849} {RNA1310_2829} {RNA815_37599}

Mlig455_033467 {REF} {Length: 709} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.2]; Integrase zinc binding domain [PF17921.3, score=46.3]; Integrase core domain [PF00665.28, score=31.5]; Zinc knuckle [PF00098.25, score=18.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=230, Expect=7e-62]} {RNA1509_14849} {RNA1310_1535} {RNA815_664}
64. MligTC455_25817 15 0.32 Mlig455_001694

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_001694 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13384.8, score=18.4]} {RNA1509_46832, RNA1509_54215} {RNA1310_12202, RNA1509_46832} {RNA1509_46832, RNA815_10117.1}
65. MligTC455_32908 97 2.02 Mlig455_064081

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_064081 {REF} {Length: 578} {NoTransDecoderORF} {RNA1310_91407} {RNA815_49815}
66. MligTC455_35013 156 3.25 Mlig455_012810

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.428

Region-enriched R5: 1.838/0.04002

 TPRG1L 0.954 - - - - 0.954 - Mlig455_012810 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Inositol phosphatase [PF12456.10, score=45.6]} {Human: ENSG00000158109, TPRG1L, tumor protein p63 regulated 1 like, [Score=110, Expect=1e-28]} {Mouse: ENSMUSG00000029030, Tprgl, transformation related protein 63 regulated like, [Score=105, Expect=3e-27]} {Smed: dd_Smed_v6_2044_0_1, dd_Smed_v6_2044_0_1, [Score=114, Expect=7e-31]} {RNA1509_40387, RNA1509_49554} {RNA1310_20350.1, RNA1509_49554} {RNA1509_49554, RNA815_14505}
67. MligTC455_49302 35 0.73 Mlig455_058893

Neo: -

Age: -

Region-enriched R2: 7.010/0.02859

 SALL3 0.954 - - - - 0.954 - Mlig455_058893 {REF} {Length: 4285} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.7]; C2H2-type zinc finger [PF13894.8, score=63.9]; Zinc-finger double domain [PF13465.8, score=55.3]; Zinc-finger of C2H2 type [PF12874.9, score=45.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=39.0]} {Human: ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=91.7, Expect=5e-18]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Mouse: ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=92.4, Expect=2e-18]; ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=92.0, Expect=2e-18]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Dmel: FBgn0261648, salm, spalt major, [RH, Score=97.4, Expect=4e-20]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [RH, Score=121, Expect=2e-28]} {RNA1310_43057} {RNA815_29425}
68. MligTC455_57483 3 0.06 Mlig455_023720

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_023720 {REF} {Length: 202} {NoTransDecoderORF} {RNA1310_54045}
69. MligTC455_00831 642 13.37 Mlig455_016457, Mlig455_016523

Neo: -

Age: logFC(26M/2M)=0.506

 LGR5 0.953 - - - - 0.953 -

Mlig455_016457 {REF} {Length: 4347} {Pfam: Leucine rich repeat [PF13855.8, score=86.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=45.8]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=40.5]} {Human: ENSG00000139292, LGR5, leucine rich repeat containing G protein-coupled receptor 5, [Score=58.5, Expect=7e-08]; ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=57.0, Expect=2e-07]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=59.7, Expect=2e-08]} {Dmel: FBgn0267435, chp, chaoptin, [Score=67.0, Expect=8e-11]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=55.8, Expect=2e-07]} {RNA1509_8817} {RNA1310_2409} {RNA815_590.1}

Mlig455_016523 {REF} {Length: 3360} {Pfam: Leucine rich repeat [PF13855.8, score=41.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.1]} {RNA1509_8817} {RNA1310_22547} {RNA815_590.1}
70. MligTC455_07351 6 0.13 Mlig455_052523, Mlig455_069102

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_052523 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1310_60355}

Mlig455_069102 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1310_60355}
71. MligTC455_17678 121 2.53 Mlig455_036741

Neo: -

Age: -

Region-enriched R2: 3.030/0.00234

Regeneration-downregulated R4: -3.160

Regeneration-depleted R4: -3.160

 TNNC2 0.953 - - - - 0.953 - Mlig455_036741 {REF} {Length: 924} {Pfam: EF-hand domain pair [PF13499.8, score=100.6]; EF-hand domain [PF13405.8, score=75.3]; EF hand [PF00036.34, score=73.4]; EF-hand domain pair [PF13833.8, score=55.4]; EF hand [PF13202.8, score=44.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.7]; EF-hand domain [PF14658.8, score=20.3]} {Human: ENSG00000101470, TNNC2, troponin C2, fast skeletal type, [Score=74.7, Expect=4e-17]} {Mouse: ENSMUSG00000017300, Tnnc2, troponin C2, fast, [Score=74.7, Expect=3e-17]} {Dmel: FBgn0040351, CG11638, [Score=68.6, Expect=5e-14]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=72.0, Expect=3e-16]} {Smed: dd_Smed_v6_4669_0_1, dd_Smed_v6_4669_0_1, [Score=68.2, Expect=4e-15]} {RNA1310_42119} {RNA815_21011}
72. MligTC455_25403 79 1.66 Mlig455_036259, Mlig455_040819

Neo: -

Age: Up-Down-Up

 GVQW3 0.953 - - - - 0.953 -

Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1}

Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947}
73. MligTC455_37241 13 0.26 Mlig455_051006

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_051006 {REF} {Length: 447} {RNA1310_129992} {RNA815_38794.1}
74. MligTC455_46194 281 5.86 Mlig455_038867

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 2.707

Region-enriched R4: 2.107/0.01387

 FBXO33 0.953 - - - - 0.953 - Mlig455_038867 {REF} {Length: 3995} {Pfam: F-box-like [PF12937.9, score=24.1]} {Human: ENSG00000165355, FBXO33, F-box protein 33, [RH, Score=73.6, Expect=3e-13]} {Mouse: ENSMUSG00000035329, Fbxo33, F-box protein 33, [RH, Score=70.1, Expect=2e-12]} {Dmel: FBgn0035959, CG4911, [RH, Score=123, Expect=1e-30]} {RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1310_15576, RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1509_34211, RNA1509_49549, RNA1509_54797, RNA815_6250.1}
75. MligTC455_52065 35 0.73 Mlig455_043270, Mlig455_043296

Neo: Int S/G2/M

Age: -

 0.953 - - - - 0.953 -

Mlig455_043270 {REF} {Length: 1377} {NoTransDecoderORF} {RNA1310_78448}

Mlig455_043296 {REF} {Length: 1020} {NoTransDecoderORF} {RNA1310_78448}
76. MligTC455_52465 414 8.63 Mlig455_001618

Neo: -

Age: -

Region-enriched R2: 1.980/0.03235

 BAG1 0.953 - - - - 0.953 - Mlig455_001618 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=38.5]; Ubiquitin-like domain [PF18037.3, score=26.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=20.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [RH, Score=81.6, Expect=8e-19]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [RH, Score=74.3, Expect=3e-16]} {RNA1509_15630} {RNA1310_15366, RNA1509_15630} {RNA1509_15630, RNA815_9266.1}
77. MligTC455_00949 12 0.25 Mlig455_008993

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_008993 {REF} {Length: 584} {NoTransDecoderORF} {RNA1310_111097}
78. MligTC455_09119 19 0.39 Mlig455_018709, Mlig455_046202, Mlig455_068557

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_018709 {REF} {Length: 149} {NoTransDecoderORF} {RNA1310_130271}

Mlig455_046202 {REF} {Length: 140} {NoTransDecoderORF} {RNA1310_130271}

Mlig455_068557 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_130271}
79. MligTC455_10719 61 1.26 Mlig455_041088

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_041088 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_18998}
80. MligTC455_15449 384 7.99 Mlig455_043360

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_043360 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_38319} {RNA1310_35989.1} {RNA815_36673}
81. MligTC455_19836 88 1.82 Mlig455_040362

Neo: -

Age: -

 SLIT1 0.952 - - - - 0.952 - Mlig455_040362 {REF} {Length: 2535} {Pfam: EGF-like domain [PF00008.29, score=29.0]; Laminin G domain [PF02210.26, score=21.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000038048, Cntnap5c, contactin associated protein-like 5C, [Score=54.3, Expect=2e-07]; ENSMUSG00000070695, Cntnap5a, contactin associated protein-like 5A, [Score=52.4, Expect=8e-07]} {Celegans: WBGene00044743, crb-3, Drosophila CRumBs homolog, [Score=50.8, Expect=5e-08]} {Smed: dd_Smed_v6_8336_0_1, dd_Smed_v6_8336_0_1, [Score=47.8, Expect=8e-06]} {RNA1509_35128} {RNA1310_8604} {RNA815_4859}
82. MligTC455_37891 86 1.8 Mlig455_006537, Mlig455_056415

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_006537 {REF} {Length: 521} {RNA1509_28941} {RNA1310_53075.1} {RNA815_47011}

Mlig455_056415 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_53075.1} {RNA815_58401}
83. MligTC455_42955 254 5.28 Mlig455_033981

Neo: -

Age: -

 WDR61 0.952 - - - - 0.952 - Mlig455_033981 {REF} {Length: 2697} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=143.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=76.5]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.2]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=37.2]; Cytochrome D1 heme domain [PF02239.18, score=28.2]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=23.1]; Nucleoporin Nup120/160 [PF11715.10, score=21.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=20.1]} {Human: ENSG00000140395, WDR61, WD repeat domain 61, [RH, Score=332, Expect=7e-114]} {Mouse: ENSMUSG00000061559, Wdr61, WD repeat domain 61, [RH, Score=333, Expect=1e-114]} {Dmel: FBgn0027524, CG3909, [RH, Score=273, Expect=1e-90]} {Celegans: WBGene00006474, wdr-5.1, WD repeat-containing protein wdr-5.1, [Score=110, Expect=1e-27]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [RH, Score=318, Expect=7e-109]} {RNA1509_26636, RNA1509_7019} {RNA1310_14474.2, RNA1509_26636} {RNA1509_26636, RNA815_6772}
84. MligTC455_14697 10 0.21 Mlig455_045505

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_045505 {REF} {Length: 658} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=27.6]} {RNA1509_45868} {RNA1310_53876} {RNA815_13104.1}
85. MligTC455_40152 71 1.48 Mlig455_044652

Neo: -

Age: -

 CALML3 0.951 - - - - 0.951 - Mlig455_044652 {REF} {Length: 973} {Pfam: EF hand [PF00036.34, score=85.2]; EF-hand domain pair [PF13499.8, score=84.3]; EF-hand domain [PF13405.8, score=70.9]; EF-hand domain pair [PF13833.8, score=61.0]; EF hand [PF13202.8, score=51.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=36.6]; EF-hand domain [PF14658.8, score=21.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=94.0, Expect=2e-24]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=86.3, Expect=1e-21]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=76.3, Expect=7e-18]} {Celegans: WBGene00006583, tnc-2, Troponin C, isoform 2, [Score=63.5, Expect=4e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=96.3, Expect=1e-25]} {RNA1310_41156} {RNA815_20058}
86. MligTC455_42097 210 4.37 Mlig455_064897, Mlig455_064901

Neo: -

Age: -

Region-enriched R2: 3.777/0.00394

 KCTD16 0.951 - - - - 0.951 -

Mlig455_064897 {REF} {Length: 1965} {Pfam: BTB/POZ domain [PF02214.24, score=51.4]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=6e-51]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=1e-51]; ENSMUSG00000041633, Kctd12b, potassium channel tetramerisation domain containing 12b, [RH, Score=169, Expect=1e-49]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=1e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=184, Expect=1e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=248, Expect=9e-82]} {RNA1310_28657.2} {RNA815_14650}

Mlig455_064901 {REF} {Length: 1674} {Pfam: BTB/POZ domain [PF02214.24, score=51.3]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=2e-51]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=3e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=183, Expect=3e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=247, Expect=2e-81]} {RNA1310_28657.2} {RNA815_14650}
87. MligTC455_04214 13 0.27 Mlig455_022345

Neo: -

Age: -

 HCN4 0.95 - - - - 0.950 - Mlig455_022345 {REF} {Length: 4342} {Pfam: Ion transport protein N-terminal [PF08412.12, score=85.6]; Ion transport protein [PF00520.33, score=81.4]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=517, Expect=7e-169]; ENSG00000164588, HCN1, hyperpolarization activated cyclic nucleotide gated potassium channel 1, [Score=504, Expect=1e-167]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=498, Expect=4e-165]; ENSG00000263324, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]; ENSG00000143630, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=510, Expect=2e-166]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [Score=506, Expect=5e-168]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=500, Expect=2e-166]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [Score=494, Expect=2e-165]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=611, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [Score=741, Expect=0.0]} {RNA1509_8719} {RNA1310_25014} {RNA815_22259}
88. MligTC455_11952 16 0.33 Mlig455_027727, Mlig455_027935

Neo: -

Age: -

 TNN 0.95 - - - - 0.950 -

Mlig455_027727 {REF} {Length: 2253} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=77.8]} {Human: ENSG00000120332, TNN, tenascin N, [Score=67.4, Expect=2e-11]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=66.2, Expect=4e-11]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=65.5, Expect=9e-11]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=65.5, Expect=7e-11]; ENSMUSG00000026725, Tnn, tenascin N, [Score=65.5, Expect=6e-11]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=62.8, Expect=4e-10]} {Dmel: FBgn0031804, CG9500, [Score=80.1, Expect=1e-16]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=59.7, Expect=2e-09]} {RNA1509_53291} {RNA1310_21728} {RNA815_10579.1}

Mlig455_027935 {REF} {Length: 736} {NoTransDecoderORF} {RNA1310_125824}
89. MligTC455_34499 65 1.36 Mlig455_025160, Mlig455_063937

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_025160 {REF} {Length: 942} {RNA1310_54940} {RNA815_33690.1}

Mlig455_063937 {REF} {Length: 995} {RNA1310_54940} {RNA815_33690.1}
90. MligTC455_53342 248 5.17 Mlig455_013412

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.470

Region-enriched R4: 4.103/0.02698

 URGCP 0.95 - - - - 0.950 - Mlig455_013412 {REF} {Length: 6115} {Pfam: Dynamin family [PF00350.25, score=26.7]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=18.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=129, Expect=1e-29]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=547, Expect=1e-162]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=545, Expect=6e-162]} {RNA1509_49381, RNA1509_9870} {RNA1310_1029.1, RNA1509_49381, RNA1509_9870} {RNA1509_49381, RNA1509_9870, RNA815_295}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA