Data search
Results for MligTC455_42955
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42955 | 254 | 5.28 | Mlig455_033981 | Neo: - Age: - |
WDR61 | Mlig455_033981 {REF} {Length: 2697} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=143.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=76.5]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.2]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=37.2]; Cytochrome D1 heme domain [PF02239.18, score=28.2]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=23.1]; Nucleoporin Nup120/160 [PF11715.10, score=21.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=20.1]} {Human: ENSG00000140395, WDR61, WD repeat domain 61, [RH, Score=332, Expect=7e-114]} {Mouse: ENSMUSG00000061559, Wdr61, WD repeat domain 61, [RH, Score=333, Expect=1e-114]} {Dmel: FBgn0027524, CG3909, [RH, Score=273, Expect=1e-90]} {Celegans: WBGene00006474, wdr-5.1, WD repeat-containing protein wdr-5.1, [Score=110, Expect=1e-27]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [RH, Score=318, Expect=7e-109]} {RNA1509_26636, RNA1509_7019} {RNA1310_14474.2, RNA1509_26636} {RNA1509_26636, RNA815_6772} |
Cumulative graph for MligTC455_42955
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.879 | 2.876 | 0.47861 | 1.00000 | |
| RegionR2 | 1.379 | 2.876 | 0.05195 | 0.27251 | |
| RegionR3 | -0.036 | 2.876 | 0.95997 | 1.00000 | |
| RegionR4 | -0.266 | 2.876 | 0.68448 | 0.97728 | |
| RegionR5 | 0.09 | 2.876 | 0.85360 | 1.00000 | |
| RegionR6 | 0.036 | 2.876 | 0.94658 | 1.00000 | |
| RegionR7 | -0.393 | 2.876 | 0.63412 | 1.00000 | |
| RegionR8 | -1.688 | 2.876 | 0.18152 | 0.76687 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.864 | 2.876 | 0.37420 | 1.00000 | |
| RegenerationR2 | 0.734 | 2.876 | 0.21589 | 0.66308 | |
| RegenerationR3 | 1.082 | 2.876 | 0.12030 | 0.53863 | |
| RegenerationR4 | 0.659 | 2.876 | 0.33894 | 0.77088 | |
| RegenerationR5 | 1.057 | 2.876 | 0.07371 | 0.42542 | |
| RegenerationR6 | 1.844 | 2.876 | 0.00718 | 0.10399 | |
| RegenerationBL | 1.736 | 2.876 | 0.09343 | 0.35915 | |
| RegenerationTP | 1.853 | 2.876 | 0.07742 | 0.44429 |
Genes with expression patterns similar to MligTC455_42955
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42955 | 254 | 5.28 | Mlig455_033981 | Neo: - Age: - |
WDR61 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033981 {REF} {Length: 2697} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=143.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=76.5]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.2]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=37.2]; Cytochrome D1 heme domain [PF02239.18, score=28.2]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=23.1]; Nucleoporin Nup120/160 [PF11715.10, score=21.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=20.1]} {Human: ENSG00000140395, WDR61, WD repeat domain 61, [RH, Score=332, Expect=7e-114]} {Mouse: ENSMUSG00000061559, Wdr61, WD repeat domain 61, [RH, Score=333, Expect=1e-114]} {Dmel: FBgn0027524, CG3909, [RH, Score=273, Expect=1e-90]} {Celegans: WBGene00006474, wdr-5.1, WD repeat-containing protein wdr-5.1, [Score=110, Expect=1e-27]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [RH, Score=318, Expect=7e-109]} {RNA1509_26636, RNA1509_7019} {RNA1310_14474.2, RNA1509_26636} {RNA1509_26636, RNA815_6772} |
| 2. | MligTC455_31066 | 2522 | 52.54 | Mlig455_013779, Mlig455_013903 | Neo: - Age: logFC(26M/2M)=0.252 Region-enriched R4: 1.112/0.01187 |
ABCD3 | 1.69 | - | - | - | 0.729 | 0.961 | - | Mlig455_013779 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region 2 [PF06472.17, score=292.3]; ABC transporter [PF00005.29, score=62.6]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.5]} {Human: ENSG00000117528, ABCD3, ATP binding cassette subfamily D member 3, [RH, Score=825, Expect=0.0]} {Mouse: ENSMUSG00000028127, Abcd3, ATP-binding cassette, sub-family D (ALD), member 3, [RH, Score=824, Expect=0.0]} {Dmel: FBgn0031069, Pmp70, Peroxisomal Membrane Protein 70 kDa, [RH, Score=716, Expect=0.0]} {Celegans: WBGene00004059, pmp-2, Peroxisomal Membrane Protein related, [RH, Score=735, Expect=0.0]} {Smed: dd_Smed_v6_6907_0_1, dd_Smed_v6_6907_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_13661, RNA1509_7546} {RNA1310_9097, RNA1509_13661} {RNA1509_13661, RNA815_3150} Mlig455_013903 {REF} {Length: 3245} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region 2 [PF06472.17, score=292.3]; ABC transporter [PF00005.29, score=62.6]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.5]} {Human: ENSG00000117528, ABCD3, ATP binding cassette subfamily D member 3, [RH, Score=824, Expect=0.0]} {Mouse: ENSMUSG00000028127, Abcd3, ATP-binding cassette, sub-family D (ALD), member 3, [RH, Score=824, Expect=0.0]} {Dmel: FBgn0031069, Pmp70, Peroxisomal Membrane Protein 70 kDa, [RH, Score=717, Expect=0.0]} {Celegans: WBGene00004059, pmp-2, Peroxisomal Membrane Protein related, [RH, Score=735, Expect=0.0]} {Smed: dd_Smed_v6_6907_0_1, dd_Smed_v6_6907_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_23727, RNA1509_7546} {RNA1310_9097, RNA1509_23727, RNA1509_7546} {RNA1509_23727, RNA1509_7546, RNA815_3150} |
| 3. | MligTC455_53342 | 248 | 5.17 | Mlig455_013412 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.470 Region-enriched R4: 4.103/0.02698 |
URGCP | 0.991 | - | - | - | - | 0.991 | - | Mlig455_013412 {REF} {Length: 6115} {Pfam: Dynamin family [PF00350.25, score=26.7]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=18.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=129, Expect=1e-29]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=547, Expect=1e-162]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=545, Expect=6e-162]} {RNA1509_49381, RNA1509_9870} {RNA1310_1029.1, RNA1509_49381, RNA1509_9870} {RNA1509_49381, RNA1509_9870, RNA815_295} |
| 4. | MligTC455_54157 | 234 | 4.88 | Mlig455_058424 | Neo: - Age: - |
PPP1R36 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_058424 {REF} {Length: 2441} {Pfam: Protein phosphatase 1 inhibitor [PF14895.8, score=139.0]} {Human: ENSG00000165807, PPP1R36, protein phosphatase 1 regulatory subunit 36, [RH, Score=191, Expect=1e-55]} {Mouse: ENSMUSG00000052221, Ppp1r36, protein phosphatase 1, regulatory subunit 36, [RH, Score=167, Expect=5e-47]} {RNA1509_6292} {RNA1310_2911.1} {RNA815_5971.1} |
| 5. | MligTC455_50518 | 10 | 0.21 | Mlig455_030197 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_030197 {REF} {Length: 3644} {Pfam: Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF13650.8, score=25.1]; Retroviral aspartyl protease [PF00077.22, score=20.5]; Integrase core domain [PF13683.8, score=20.4]; Domain of unknown function (DUF4537) [PF15057.8, score=20.4]} {Celegans: WBGene00019335, K02F6.1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_3718_0_1, dd_Smed_v6_3718_0_1, [Score=81.3, Expect=5e-16]} {RNA1509_37281} {RNA1310_6533.1} {RNA815_14259} | |
| 6. | MligTC455_25403 | 79 | 1.66 | Mlig455_036259, Mlig455_040819 | Neo: - Age: Up-Down-Up |
GVQW3 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1} Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947} |
| 7. | MligTC455_27775 | 97 | 2.02 | Mlig455_018548 | Neo: Irradiation Age: - |
ATAD5 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_018548 {REF} {Length: 4116} {TRANSSPLICED} {Human: ENSG00000176208, ATAD5, ATPase family, AAA domain containing 5, [RH, Score=77.4, Expect=1e-13]} {Mouse: ENSMUSG00000017550, Atad5, ATPase family, AAA domain containing 5, [RH, Score=76.3, Expect=2e-13]} {Dmel: FBgn0036574, elg1, enhanced level of genomic instability 1, [Score=51.6, Expect=4e-06]} {Celegans: WBGene00013156, Y53F4B.9, [Score=51.2, Expect=4e-06]} {RNA1509_17564} {RNA1310_10601.1, RNA1509_17564} {RNA1509_17564, RNA815_24292} |
| 8. | MligTC455_08635 | 33 | 0.69 | Mlig455_041022, Mlig455_041189 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_041022 {REF} {Length: 1305} {RNA1509_53357} {RNA1310_12881} {RNA815_27630} Mlig455_041189 {REF} {Length: 1255} {RNA1509_53357} {RNA1310_12881} {RNA815_27630} |
|
| 9. | MligTC455_09119 | 19 | 0.39 | Mlig455_018709, Mlig455_046202, Mlig455_068557 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_018709 {REF} {Length: 149} {NoTransDecoderORF} {RNA1310_130271} Mlig455_046202 {REF} {Length: 140} {NoTransDecoderORF} {RNA1310_130271} Mlig455_068557 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_130271} |
|
| 10. | MligTC455_17441 | 203 | 4.23 | Mlig455_043730, Mlig455_043821, Mlig455_047428 | Neo: Germline Age: - Region-enriched R5: 3.909/0.00034 |
RPA1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_043730 {REF} {Length: 2711} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=51.7]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=3e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=1e-83]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=249, Expect=7e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=270, Expect=1e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755} Mlig455_043821 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=52.1]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.4]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=292, Expect=7e-90]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=277, Expect=4e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=248, Expect=9e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=273, Expect=1e-83]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755} Mlig455_047428 {REF} {Length: 2693} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=74.5]; OB-fold nucleic acid binding domain [PF01336.27, score=51.3]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=2e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=7e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=250, Expect=3e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=269, Expect=3e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755} |
| 11. | MligTC455_19119 | 48 | 0.99 | Mlig455_060984 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_060984 {REF} {Length: 533} {NoTransDecoderORF} {RNA1509_52549} | |
| 12. | MligTC455_39813 | 75 | 1.57 | Mlig455_045961 | Neo: - Age: - |
SLC17A8 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_045961 {REF} {Length: 3015} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_53919} {RNA1310_33327} {RNA815_42042} |
| 13. | MligTC455_52465 | 414 | 8.63 | Mlig455_001618 | Neo: - Age: - Region-enriched R2: 1.980/0.03235 |
BAG1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_001618 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=38.5]; Ubiquitin-like domain [PF18037.3, score=26.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=20.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [RH, Score=81.6, Expect=8e-19]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [RH, Score=74.3, Expect=3e-16]} {RNA1509_15630} {RNA1310_15366, RNA1509_15630} {RNA1509_15630, RNA815_9266.1} |
| 14. | MligTC455_09820 | 12 | 0.26 | Mlig455_038000 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_038000 {REF} {Length: 896} {NoTransDecoderORF} {RNA1310_107689} {RNA815_30599} | |
| 15. | MligTC455_11978 | 125 | 2.6 | Mlig455_025347, Mlig455_025403, Mlig455_040335, Mlig455_055958 | Neo: - Age: Down-Up-Down Regeneration-upregulated R2: 4.813 Regeneration-enriched R2: 4.813 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_025347 {REF} {Length: 1275} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1} Mlig455_025403 {REF} {Length: 1694} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1} Mlig455_040335 {REF} {Length: 1691} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1} Mlig455_055958 {REF} {Length: 1538} {TRANSSPLICED} {RNA1509_29097} {RNA1310_7101.2} {RNA815_7291.1} |
|
| 16. | MligTC455_17255 | 12 | 0.24 | Mlig455_013836 | Neo: - Age: Up-Down-Up |
0.952 | - | - | - | - | 0.952 | - | Mlig455_013836 {REF} {Length: 3587} {TRANSSPLICED} {RNA1509_17462, RNA1509_24953} {RNA1310_485.1, RNA1509_24953} {RNA1509_24953, RNA815_2772.1} | |
| 17. | MligTC455_46804 | 306 | 6.37 | Mlig455_056579, Mlig455_056600 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_056579 {REF} {Length: 162} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48005} {RNA1310_5608.2} {RNA815_1761.1} Mlig455_056600 {REF} {Length: 3791} {TRANSSPLICED} {RNA1509_45969, RNA1509_48005} {RNA1310_5608.1, RNA1509_45969, RNA1509_48005} {RNA1509_45969, RNA1509_48005, RNA815_1761.1} |
|
| 18. | MligTC455_08532 | 28 | 0.59 | Mlig455_040448 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_040448 {REF} {Length: 1421} {RNA1310_41426} {RNA815_34740} |