TomoSeq data search

Data search

Results for MligTC455_09838

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_09838

23

0.48

Mlig455_050383

Neo: -

Age: -

ASIC1

Mlig455_050383 {REF} {Length: 2571} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_22533_0_1, dd_Smed_v6_22533_0_1, [Score=87.8, Expect=4e-18]} {RNA1509_59645} {RNA1310_17129} {RNA815_131.5}

Cumulative graph for MligTC455_09838

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.121	0.913	0.99985	1.00000
RegionR2	-3.226	0.913	1.00000	1.00000
RegionR3	-1.804	0.913	0.99983	1.00000
RegionR4	2.435	0.913	0.07457	0.25261
RegionR5	-1.655	0.913	0.99975	1.00000
RegionR6	0.662	0.913	0.35168	0.93677
RegionR7	2.63	0.913	0.08718	0.56741
RegionR8	-0.163	0.913	0.99986	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.749	0.913	0.99991	1.00000
RegenerationR2	-1.029	0.913	0.99986	1.00000
RegenerationR3	0.269	0.913	0.56798	0.89310
RegenerationR4	-1.153	0.913	0.37517	0.79805
RegenerationR5	2.629	0.913	0.10076	0.48277
RegenerationR6	-0.794	0.913	0.51970	0.82034
RegenerationBL	-0.221	0.913	0.91212	1.00000
RegenerationTP	-3.498	0.913	0.99976	1.00000

Genes with expression patterns similar to MligTC455_09838

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_09838	23	0.48	Mlig455_050383	Neo: - Age: -	ASIC1	3	-	-	1.000	-	1.000	1.000	Mlig455_050383 {REF} {Length: 2571} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_22533_0_1, dd_Smed_v6_22533_0_1, [Score=87.8, Expect=4e-18]} {RNA1509_59645} {RNA1310_17129} {RNA815_131.5}
2.	MligTC455_42283	18	0.37	Mlig455_060939	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.716		0.968	-	-	-	-	-	0.968	Mlig455_060939 {REF} {Length: 900} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4604) [PF15377.8, score=45.8]} {Smed: dd_Smed_v6_8241_0_1, dd_Smed_v6_8241_0_1, [RH, Score=45.8, Expect=2e-06]} {RNA1310_36898.1} {RNA815_23245}
3.	MligTC455_48758	163	3.39	Mlig455_010315	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.335	ARF6	0.965	-	-	-	-	-	0.965	Mlig455_010315 {REF} {Length: 1923} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=247.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.7]; Ras family [PF00071.24, score=50.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=45.8]; G-protein alpha subunit [PF00503.22, score=38.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.2]; 6-phosphofructo-2-kinase [PF01591.20, score=18.1]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [RH, Score=301, Expect=7e-106]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [RH, Score=301, Expect=5e-106]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [RH, Score=296, Expect=4e-104]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [RH, Score=292, Expect=1e-102]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [RH, Score=279, Expect=1e-97]} {RNA1509_10836, RNA1509_35617} {RNA1310_23391, RNA1509_35617} {RNA1509_35617, RNA815_10077}
4.	MligTC455_26655	115	2.4	Mlig455_038895, Mlig455_063862	Neo: - Age: -	TRMT2A	0.954	-	-	-	-	-	0.954	Mlig455_038895 {REF} {Length: 2987} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.5]; Methyltransferase domain [PF08241.14, score=26.7]; Methyltransferase small domain [PF05175.16, score=24.8]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.7]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.2]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=343, Expect=8e-110]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=340, Expect=1e-108]} {Dmel: FBgn0036838, CG3808, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=7e-103]} {RNA1509_24549} {RNA1310_12513, RNA1509_24549} {RNA1509_24549, RNA815_4992} Mlig455_063862 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: tRNA (Uracil-5-)-methyltransferase [PF05958.13, score=58.0]; Methyltransferase domain [PF13847.8, score=39.6]; Methyltransferase domain [PF13649.8, score=36.4]; Methyltransferase domain [PF08241.14, score=26.6]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=24.7]; Methyltransferase small domain [PF05175.16, score=24.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.1]; ubiE/COQ5 methyltransferase family [PF01209.20, score=20.6]; Conserved hypothetical protein 95 [PF03602.17, score=20.5]; Putative methyltransferase [PF02390.19, score=18.7]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [RH, Score=340, Expect=2e-108]} {Mouse: ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [RH, Score=336, Expect=2e-107]} {Dmel: FBgn0036838, CG3808, [RH, Score=327, Expect=7e-104]} {Celegans: WBGene00019241, H24K24.4, [RH, Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [RH, Score=323, Expect=8e-103]} {RNA1509_36910} {RNA1310_12513, RNA1509_36910} {RNA1509_36910, RNA815_4992}

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