TomoSeq data search

Data search

Results for MligTC455_42283

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42283

18

0.37

Mlig455_060939

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.716

Mlig455_060939 {REF} {Length: 900} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4604) [PF15377.8, score=45.8]} {Smed: dd_Smed_v6_8241_0_1, dd_Smed_v6_8241_0_1, [RH, Score=45.8, Expect=2e-06]} {RNA1310_36898.1} {RNA815_23245}

Cumulative graph for MligTC455_42283

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.926	0.897	0.99991	1.00000
RegionR2	-3.148	0.897	0.99967	1.00000
RegionR3	-0.73	0.897	0.99990	1.00000
RegionR4	3.737	0.897	0.99983	1.00000
RegionR5	0.545	0.897	0.99996	1.00000
RegionR6	-0.82	0.897	0.99992	1.00000
RegionR7	-0.835	0.897	0.99996	1.00000
RegionR8	-0.675	0.897	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.126	0.897	0.99996	1.00000
RegenerationR2	3.018	0.897	0.03853	0.32370
RegenerationR3	1.516	0.897	0.38155	0.79132
RegenerationR4	1.677	0.897	0.27825	0.72343
RegenerationR5	2.893	0.897	0.09195	0.46533
RegenerationR6	2.016	0.897	0.32390	0.66997
RegenerationBL	-0.301	0.897	0.99998	1.00000
RegenerationTP	0.199	0.897	0.77000	1.00000

Genes with expression patterns similar to MligTC455_42283

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42283	18	0.37	Mlig455_060939	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.716		3	-	-	-	1.000	1.000	1.000	Mlig455_060939 {REF} {Length: 900} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4604) [PF15377.8, score=45.8]} {Smed: dd_Smed_v6_8241_0_1, dd_Smed_v6_8241_0_1, [RH, Score=45.8, Expect=2e-06]} {RNA1310_36898.1} {RNA815_23245}
2.	MligTC455_24547	574	11.97	Mlig455_054746	Neo: Irradiation Age: - Region-enriched R5: 3.521/0.00000		1.73	-	-	-	-	0.778	0.952	Mlig455_054746 {REF} {Length: 2849} {Pfam: Antistasin family [PF02822.16, score=32.2]} {RNA1509_13907, RNA1509_37754, RNA1509_4061} {RNA1310_7513.1, RNA1509_13907, RNA1509_37754} {RNA1509_13907, RNA1509_37754, RNA815_3450.1}
3.	MligTC455_14818	14	0.29	Mlig455_057571	Neo: - Age: Up-Down-Up	FUT5	0.978	-	-	-	-	0.978	-	Mlig455_057571 {REF} {Length: 2908} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=160.1]; Fucosyltransferase, N-terminal [PF17039.7, score=46.0]} {Human: ENSG00000130383, FUT5, fucosyltransferase 5, [Score=121, Expect=4e-30]; ENSG00000156413, FUT6, fucosyltransferase 6, [Score=121, Expect=4e-30]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=115, Expect=5e-28]} {Mouse: ENSMUSG00000055373, Fut9, fucosyltransferase 9, [Score=114, Expect=1e-27]; ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=114, Expect=7e-28]} {Dmel: FBgn0036485, FucTA, [Score=126, Expect=1e-31]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=106, Expect=9e-25]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=152, Expect=3e-41]} {RNA1310_61511} {RNA815_39006}
4.	MligTC455_09838	23	0.48	Mlig455_050383	Neo: - Age: -	ASIC1	0.968	-	-	-	-	-	0.968	Mlig455_050383 {REF} {Length: 2571} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_22533_0_1, dd_Smed_v6_22533_0_1, [Score=87.8, Expect=4e-18]} {RNA1509_59645} {RNA1310_17129} {RNA815_131.5}
5.	MligTC455_41207	52	1.08	Mlig455_011309, Mlig455_060938	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_011309 {REF} {Length: 76} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22660} {RNA1310_12928.1} {RNA815_18634} Mlig455_060938 {REF} {Length: 68} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22660} {RNA1310_12928.1} {RNA815_18634}
6.	MligTC455_22239	10	0.21	Mlig455_008513	Neo: - Age: Down-Down-Up	PSMF1	0.96	-	-	-	-	0.960	-	Mlig455_008513 {REF} {Length: 3406} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.9} {Pfam: PI31 proteasome regulator N-terminal [PF11566.10, score=24.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.4]} {Human: ENSG00000125818, PSMF1, proteasome inhibitor subunit 1, [RH, Score=83.6, Expect=7e-18]} {Mouse: ENSMUSG00000032869, Psmf1, proteasome (prosome, macropain) inhibitor subunit 1, [RH, Score=76.3, Expect=2e-15]} {Dmel: FBgn0033669, PI31, Proteasome inhibitor 31 kDa, [Score=50.4, Expect=7e-07]} {RNA1509_6467} {RNA1310_17656} {RNA815_17675.1}
7.	MligTC455_16019	115	2.4	Mlig455_052330	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_052330 {REF} {Length: 1758} {RNA1509_43934} {RNA1310_14928} {RNA815_9981}
8.	MligTC455_41208	40	0.84	Mlig455_061136	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_061136 {REF} {Length: 659} {RNA1509_22660} {RNA1310_12928.1} {RNA815_18634}

Berezikov Lab - 2020-2021 © ERIBA