Data search
Results for MligTC455_09990
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09990 | 28 | 0.58 | Mlig455_062647 | Neo: - Age: Down-Up-Up |
Mlig455_062647 {REF} {Length: 1162} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=35.6]} {RNA1509_19236} {RNA1310_42966} {RNA815_24864} |
Cumulative graph for MligTC455_09990
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.126 | 0.615 | 0.99983 | 1.00000 | |
| RegionR2 | -2.014 | 0.615 | 0.99989 | 1.00000 | |
| RegionR3 | 0.667 | 0.615 | 0.99989 | 1.00000 | |
| RegionR4 | 4.523 | 0.615 | 0.99989 | 1.00000 | |
| RegionR5 | 3.201 | 0.615 | 0.99992 | 1.00000 | |
| RegionR6 | 1.603 | 0.615 | 0.99997 | 1.00000 | |
| RegionR7 | -0.277 | 0.615 | 0.99999 | 1.00000 | |
| RegionR8 | -1.577 | 0.615 | 0.99993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.937 | 0.615 | 0.99993 | 1.00000 | |
| RegenerationR2 | 2.539 | 0.615 | 0.99970 | 1.00000 | |
| RegenerationR3 | 0.308 | 0.615 | 0.99971 | 1.00000 | |
| RegenerationR4 | -0.341 | 0.615 | 0.99994 | 1.00000 | |
| RegenerationR5 | -0.453 | 0.615 | 0.99995 | 1.00000 | |
| RegenerationR6 | -0.994 | 0.615 | 1.00000 | 1.00000 | |
| RegenerationBL | 1.455 | 0.615 | 0.99973 | 1.00000 | |
| RegenerationTP | -2.256 | 0.615 | 0.99994 | 1.00000 |
Genes with expression patterns similar to MligTC455_09990
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09990 | 28 | 0.58 | Mlig455_062647 | Neo: - Age: Down-Up-Up |
1 | - | - | - | 1.000 | - | - | Mlig455_062647 {REF} {Length: 1162} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=35.6]} {RNA1509_19236} {RNA1310_42966} {RNA815_24864} | |
| 2. | MligTC455_38767 | 51 | 1.06 | Mlig455_026067, Mlig455_037311 | Neo: - Age: - |
0.986 | - | - | - | 0.986 | - | - | Mlig455_026067 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_69727} {RNA815_43314} Mlig455_037311 {REF} {Length: 370} {NoTransDecoderORF} {RNA1310_129130} {RNA815_43314} |
|
| 3. | MligTC455_16247 | 405 | 8.43 | Mlig455_052011, Mlig455_057230 | Neo: - |
CXorf58 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_052011 {REF} {Length: 2077} {Human: ENSG00000165182, CXorf58, chromosome X open reading frame 58, [RH, Score=192, Expect=4e-58]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [Score=57.8, Expect=5e-09]} {Smed: dd_Smed_v6_8151_0_3, dd_Smed_v6_8151_0_3, [RH, Score=108, Expect=2e-27]} {RNA1509_41758} {RNA1310_19977} {RNA815_9459} Mlig455_057230 {REF} {Length: 3099} {Human: ENSG00000165182, CXorf58, chromosome X open reading frame 58, [RH, Score=194, Expect=9e-59]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [Score=55.1, Expect=4e-08]} {Smed: dd_Smed_v6_8151_0_3, dd_Smed_v6_8151_0_3, [RH, Score=107, Expect=7e-27]} {RNA1509_41758} {RNA1310_19977} {RNA815_9459} |
| 4. | MligTC455_47157 | 288 | 6 | Mlig455_002803 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_002803 {REF} {Length: 431} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4874} {RNA1310_82389} {RNA815_42310} | |
| 5. | MligTC455_41379 | 237 | 4.93 | Mlig455_010916 | Neo: - Age: logFC(26M/2M)=-0.362 Region-enriched R2: 2.033/0.03884 |
LRRC63 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_010916 {REF} {Length: 3357} {Pfam: Leucine rich repeat [PF13855.8, score=63.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.4]; Leucine Rich repeat [PF13516.8, score=23.2]; Leucine Rich Repeat [PF00560.35, score=22.9]} {Human: ENSG00000173988, LRRC63, leucine rich repeat containing 63, [RH, Score=197, Expect=6e-54]} {Mouse: ENSMUSG00000021997, Lrrc63, leucine rich repeat containing 63, [RH, Score=173, Expect=2e-45]} {Dmel: FBgn0038504, Sur-8, [Score=65.1, Expect=1e-10]} {Celegans: WBGene00002632, let-413, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_14985_0_1, dd_Smed_v6_14985_0_1, [Score=117, Expect=6e-28]} {RNA1509_13259} {RNA1310_13580} {RNA815_3945.1} |
| 6. | MligTC455_28663 | 25389 | 528.93 | Mlig455_026029 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.557 Regeneration-upregulated BL: 1.816 Regeneration-enriched BL: 1.816 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_026029 {REF} {Length: 884} {RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421} {RNA1310_73021.2, RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421} {RNA1509_18581, RNA1509_18838, RNA1509_4046, RNA1509_761, RNA1509_9421, RNA815_26455.2} |
Berezikov Lab - 2020-2021 © ERIBA