TomoSeq data search

Data search

Results for MligTC455_10089

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10089	722	15.04	Mlig455_033138	Neo: - Age: -	ZNF846	Mlig455_033138 {REF} {Length: 4160} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=62.2]; Zinc-finger double domain [PF13465.8, score=60.1]; C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc-finger of C2H2 type [PF12874.9, score=33.4]; C2H2-type zinc finger [PF13912.8, score=32.2]; Family of unknown function (DUF5810) [PF19126.2, score=21.9]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=18.6]} {Human: ENSG00000196605, ZNF846, zinc finger protein 846, [Score=106, Expect=5e-24]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=103, Expect=7e-23]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=102, Expect=1e-22]; ENSG00000167394, ZNF668, zinc finger protein 668, [Score=102, Expect=2e-22]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=102, Expect=1e-22]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=101, Expect=3e-22]; ENSG00000196391, ZNF774, zinc finger protein 774, [Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=105, Expect=1e-23]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=105, Expect=2e-23]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=103, Expect=2e-23]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=103, Expect=1e-23]; ENSMUSG00000059423, Zfp933, zinc finger protein 933, [Score=101, Expect=1e-22]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=100, Expect=4e-23]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=100, Expect=3e-22]} {Dmel: FBgn0004618, gl, glass, [Score=99.0, Expect=8e-22]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=85.9, Expect=5e-19]} {Smed: dd_Smed_v6_75162_0_1, dd_Smed_v6_75162_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_13642, RNA1509_21123} {RNA1310_22833.1, RNA1509_13642, RNA1509_21123} {RNA1509_13642, RNA1509_21123, RNA815_12444}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10089

722

15.04

Mlig455_033138

Neo: -

Age: -

ZNF846

Mlig455_033138 {REF} {Length: 4160} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=62.2]; Zinc-finger double domain [PF13465.8, score=60.1]; C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc-finger of C2H2 type [PF12874.9, score=33.4]; C2H2-type zinc finger [PF13912.8, score=32.2]; Family of unknown function (DUF5810) [PF19126.2, score=21.9]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=18.6]} {Human: ENSG00000196605, ZNF846, zinc finger protein 846, [Score=106, Expect=5e-24]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=103, Expect=7e-23]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=102, Expect=1e-22]; ENSG00000167394, ZNF668, zinc finger protein 668, [Score=102, Expect=2e-22]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=102, Expect=1e-22]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=101, Expect=3e-22]; ENSG00000196391, ZNF774, zinc finger protein 774, [Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=105, Expect=1e-23]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=105, Expect=2e-23]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=103, Expect=2e-23]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=103, Expect=1e-23]; ENSMUSG00000059423, Zfp933, zinc finger protein 933, [Score=101, Expect=1e-22]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=100, Expect=4e-23]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=100, Expect=3e-22]} {Dmel: FBgn0004618, gl, glass, [Score=99.0, Expect=8e-22]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=85.9, Expect=5e-19]} {Smed: dd_Smed_v6_75162_0_1, dd_Smed_v6_75162_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_13642, RNA1509_21123} {RNA1310_22833.1, RNA1509_13642, RNA1509_21123} {RNA1509_13642, RNA1509_21123, RNA815_12444}

Cumulative graph for MligTC455_10089

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.859	4.086	0.52219	1.00000
RegionR2	-0.395	4.086	0.51299	0.88989
RegionR3	-0.291	4.086	0.55786	1.00000
RegionR4	0.258	4.086	0.66935	0.96644
RegionR5	0.626	4.086	0.16685	0.43303
RegionR6	0.004	4.086	0.99319	1.00000
RegionR7	0.132	4.086	0.81597	1.00000
RegionR8	0.525	4.086	0.40927	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.086	4.086	0.50436	1.00000
RegenerationR2	0.141	4.086	0.79496	0.98809
RegenerationR3	-0.344	4.086	0.56232	0.88986
RegenerationR4	-0.735	4.086	0.22051	0.66849
RegenerationR5	-0.929	4.086	0.09437	0.47049
RegenerationR6	-0.794	4.086	0.18148	0.51633
RegenerationBL	-0.463	4.086	0.45707	0.82473
RegenerationTP	-0.857	4.086	0.19431	0.63317

Genes with expression patterns similar to MligTC455_10089

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10089	722	15.04	Mlig455_033138	Neo: - Age: -	ZNF846	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033138 {REF} {Length: 4160} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=62.2]; Zinc-finger double domain [PF13465.8, score=60.1]; C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc-finger of C2H2 type [PF12874.9, score=33.4]; C2H2-type zinc finger [PF13912.8, score=32.2]; Family of unknown function (DUF5810) [PF19126.2, score=21.9]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=18.6]} {Human: ENSG00000196605, ZNF846, zinc finger protein 846, [Score=106, Expect=5e-24]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=103, Expect=7e-23]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=102, Expect=1e-22]; ENSG00000167394, ZNF668, zinc finger protein 668, [Score=102, Expect=2e-22]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=102, Expect=1e-22]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=101, Expect=3e-22]; ENSG00000196391, ZNF774, zinc finger protein 774, [Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=105, Expect=1e-23]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=105, Expect=2e-23]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=103, Expect=2e-23]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=103, Expect=1e-23]; ENSMUSG00000059423, Zfp933, zinc finger protein 933, [Score=101, Expect=1e-22]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=100, Expect=4e-23]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=100, Expect=3e-22]} {Dmel: FBgn0004618, gl, glass, [Score=99.0, Expect=8e-22]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=85.9, Expect=5e-19]} {Smed: dd_Smed_v6_75162_0_1, dd_Smed_v6_75162_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_13642, RNA1509_21123} {RNA1310_22833.1, RNA1509_13642, RNA1509_21123} {RNA1509_13642, RNA1509_21123, RNA815_12444}
2.	MligTC455_19626	526	10.96	Mlig455_041665	Neo: - Age: Up-Down-Down		0.968	-	-	-	-	0.968	-	Mlig455_041665 {REF} {Length: 2112} {RNA1509_29761, RNA1509_8639} {RNA1310_7533, RNA1509_29761} {RNA1509_29761, RNA815_1087}
3.	MligTC455_22444	563	11.73	Mlig455_002477	Neo: - Age: Up-Down-Down		0.967	-	-	-	0.967	-	-	Mlig455_002477 {REF} {Length: 4129} {Pfam: TIR domain [PF13676.8, score=78.3]; Domain of unknown function (DUF4441) [PF14536.8, score=21.3]; Subunit CCDC53 of WASH complex [PF10152.11, score=19.8]; Protein of unknown function (DUF775) [PF05603.14, score=19.2]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=159, Expect=1e-40]} {RNA1509_15248} {RNA1310_4628} {RNA815_1374}
4.	MligTC455_44033	1085	22.59	Mlig455_044380	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_044380 {REF} {Length: 2284} {RNA1509_26585} {RNA1310_14775, RNA1509_26585} {RNA1509_26585, RNA815_32672}
5.	MligTC455_53627	1053	21.95	Mlig455_033978, Mlig455_056722	Neo: - Age: -	SLIT1	0.959	-	-	-	-	0.959	-	Mlig455_033978 {REF} {Length: 2051} {Pfam: Leucine rich repeat [PF13855.8, score=61.1]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=3e-06]} {Dmel: FBgn0264089, sli, slit, [Score=52.8, Expect=5e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013} Mlig455_056722 {REF} {Length: 1986} {Pfam: Leucine rich repeat [PF13855.8, score=60.1]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.4, Expect=6e-06]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=3e-06]} {Dmel: FBgn0264089, sli, slit, [Score=53.1, Expect=4e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013}
6.	MligTC455_49908	1092	22.76	Mlig455_045523	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_045523 {REF} {Length: 2928} {TRANSSPLICED} {RNA1509_24175, RNA1509_44512} {RNA1310_9845, RNA1509_24175, RNA1509_44512} {RNA1509_24175, RNA1509_44512, RNA815_1106}
7.	MligTC455_13144	399	8.32	Mlig455_066089	Neo: - Age: logFC(26M/2M)=-0.436	FGD4	0.955	-	-	-	0.955	-	-	Mlig455_066089 {REF} {Length: 2986} {Pfam: RhoGEF domain [PF00621.22, score=94.5]; FYVE zinc finger [PF01363.23, score=36.0]} {Human: ENSG00000139132, FGD4, FYVE, RhoGEF and PH domain containing 4, [Score=97.1, Expect=4e-20]; ENSG00000146192, FGD2, FYVE, RhoGEF and PH domain containing 2, [Score=92.8, Expect=6e-19]} {Mouse: ENSMUSG00000022788, Fgd4, FYVE, RhoGEF and PH domain containing 4, [Score=102, Expect=5e-22]} {Dmel: FBgn0085447, sif, still life, [Score=57.4, Expect=5e-08]} {Celegans: WBGene00006431, tag-52, Putative protein tag-52, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=52.4, Expect=1e-06]} {RNA1509_19578, RNA1509_57919} {RNA1310_3630, RNA1509_19578, RNA1509_57919} {RNA1509_19578, RNA1509_57919, RNA815_7148}
8.	MligTC455_54310	844	17.58	Mlig455_029882	Neo: Int S/G2/M Age: -		0.954	-	-	-	-	-	0.954	Mlig455_029882 {REF} {Length: 1280} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=38.0]; GCN5-related N-acetyl-transferase [PF14542.8, score=27.8]; Acetyltransferase (GNAT) domain [PF13508.9, score=19.5]} {RNA1509_54429} {RNA1310_25668, RNA1509_54429} {RNA1509_54429, RNA815_10222.1}
9.	MligTC455_49909	1098	22.87	Mlig455_065719	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_065719 {REF} {Length: 3256} {TRANSSPLICED} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1310_9845, RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860, RNA815_1106}