Data search
Results for MligTC455_49909
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49909 | 1098 | 22.87 | Mlig455_065719 | Neo: - Age: - |
Mlig455_065719 {REF} {Length: 3256} {TRANSSPLICED} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1310_9845, RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860, RNA815_1106} |
Cumulative graph for MligTC455_49909
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.164 | 4.65 | 0.86645 | 1.00000 | |
| RegionR2 | 0.11 | 4.65 | 0.79158 | 1.00000 | |
| RegionR3 | -0.341 | 4.65 | 0.31784 | 0.85594 | |
| RegionR4 | -0.034 | 4.65 | 0.93801 | 1.00000 | |
| RegionR5 | -0.24 | 4.65 | 0.44974 | 0.81135 | |
| RegionR6 | -0.933 | 4.65 | 0.01108 | 0.17942 | |
| RegionR7 | 0.388 | 4.65 | 0.33089 | 0.96592 | |
| RegionR8 | 0.887 | 4.65 | 0.05103 | 0.44151 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.371 | 4.65 | 0.78266 | 1.00000 | |
| RegenerationR2 | 0.088 | 4.65 | 0.80632 | 0.99184 | |
| RegenerationR3 | 0.033 | 4.65 | 0.93605 | 1.00000 | |
| RegenerationR4 | -0.517 | 4.65 | 0.22608 | 0.67455 | |
| RegenerationR5 | -0.113 | 4.65 | 0.76826 | 0.97850 | |
| RegenerationR6 | 0.516 | 4.65 | 0.22685 | 0.57195 | |
| RegenerationBL | 0.326 | 4.65 | 0.45059 | 0.81760 | |
| RegenerationTP | -1.082 | 4.65 | 0.02450 | 0.26539 |
Genes with expression patterns similar to MligTC455_49909
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49909 | 1098 | 22.87 | Mlig455_065719 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065719 {REF} {Length: 3256} {TRANSSPLICED} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1310_9845, RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860} {RNA1509_28881, RNA1509_30807, RNA1509_32058, RNA1509_37860, RNA815_1106} | |
| 2. | MligTC455_49908 | 1092 | 22.76 | Mlig455_045523 | Neo: - Age: - |
5.956 | 0.999 | 0.992 | 0.999 | 0.995 | 0.972 | 0.999 | Mlig455_045523 {REF} {Length: 2928} {TRANSSPLICED} {RNA1509_24175, RNA1509_44512} {RNA1310_9845, RNA1509_24175, RNA1509_44512} {RNA1509_24175, RNA1509_44512, RNA815_1106} | |
| 3. | MligTC455_44214 | 826 | 17.2 | Mlig455_051977 | Neo: - Age: logFC(26M/2M)=-0.586 |
TRPM3 | 1.704 | - | - | - | 0.745 | - | 0.959 | Mlig455_051977 {REF} {Length: 7693} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.9]; Ankyrin repeats (many copies) [PF13637.8, score=159.2]; Ankyrin repeat [PF13606.8, score=83.5]; Ankyrin repeats (many copies) [PF13857.8, score=69.7]; Ankyrin repeat [PF00023.32, score=40.0]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=19.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.6, Expect=1e-16]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=88.6, Expect=7e-17]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=84.3, Expect=1e-15]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=77.8, Expect=1e-13]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=115, Expect=1e-25]} {RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1310_537, RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1509_3976, RNA1509_45452, RNA1509_49658, RNA815_57.1} |
| 4. | MligTC455_51275 | 335 | 6.98 | Mlig455_045339 | Neo: - Age: logFC(26M/2M)=-0.374 |
GRM3 | 1.683 | 0.730 | - | - | - | 0.953 | - | Mlig455_045339 {REF} {Length: 4374} {Pfam: Receptor family ligand binding region [PF01094.30, score=112.7]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=78.2, Expect=7e-14]; ENSG00000164082, GRM2, glutamate metabotropic receptor 2, [Score=76.6, Expect=2e-13]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=75.5, Expect=3e-13]; ENSMUSG00000023192, Grm2, glutamate receptor, metabotropic 2, [Score=73.6, Expect=1e-12]} {Dmel: FBgn0050361, mtt, mangetout, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00021152, mgl-3, Metabotropic GLutamate receptor family, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=62.0, Expect=2e-09]} {RNA1509_29529} {RNA1310_2368.1, RNA1509_29529} {RNA1509_29529, RNA815_7926} |
| 5. | MligTC455_16912 | 2782 | 57.95 | Mlig455_060189 | Neo: - Age: - |
IFT46 | 1.671 | 0.714 | - | - | - | 0.957 | - | Mlig455_060189 {REF} {Length: 1198} {TRANSSPLICED} {Pfam: Intraflagellar transport complex B protein 46 C terminal [PF12317.10, score=308.3]} {Human: ENSG00000118096, IFT46, intraflagellar transport 46, [RH, Score=298, Expect=4e-99]} {Mouse: ENSMUSG00000002031, Ift46, intraflagellar transport 46, [RH, Score=296, Expect=2e-98]} {Dmel: FBgn0032692, CG15161, [RH, Score=114, Expect=4e-28]} {Celegans: WBGene00001122, dyf-6, Intraflagellar transport protein 46 homolog, [RH, Score=201, Expect=8e-60]} {Smed: dd_Smed_v6_5980_0_2, dd_Smed_v6_5980_0_2, [RH, Score=274, Expect=7e-90]} {RNA1509_25577} {RNA1310_17521.1} {RNA815_10568.1} |
| 6. | MligTC455_23684 | 1511 | 31.48 | Mlig455_015712 | Neo: - Age: logFC(26M/2M)=-0.219 |
AKAP13 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_015712 {REF} {Length: 3481} {Pfam: RhoGEF domain [PF00621.22, score=60.5]; PH domain [PF17838.3, score=46.7]} {Human: ENSG00000170776, AKAP13, A-kinase anchoring protein 13, [RH, Score=139, Expect=7e-33]} {Mouse: ENSMUSG00000066406, Akap13, A kinase (PRKA) anchor protein 13, [RH, Score=142, Expect=7e-34]} {Smed: dd_Smed_v6_5252_0_2, dd_Smed_v6_5252_0_2, [RH, Score=67.4, Expect=4e-11]} {RNA1509_11351} {RNA1310_2602.1} {RNA815_4674} |
| 7. | MligTC455_46460 | 1106 | 23.04 | Mlig455_011070 | Neo: Irradiation Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_011070 {REF} {Length: 1543} {Pfam: Seven in absentia protein family [PF03145.18, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.9]} {RNA1509_31346, RNA1509_9521} {RNA1310_16183.1, RNA1509_31346, RNA1509_9521} {RNA1509_31346, RNA1509_9521, RNA815_31448} | |
| 8. | MligTC455_19976 | 1008 | 21 | Mlig455_006463 | Neo: - Age: logFC(26M/2M)=-0.227 |
NGEF | 0.954 | - | - | - | - | - | 0.954 | Mlig455_006463 {REF} {Length: 5393} {Pfam: RhoGEF domain [PF00621.22, score=103.1]; SH3 domain [PF00018.30, score=45.6]; Variant SH3 domain [PF07653.19, score=43.7]; Variant SH3 domain [PF14604.8, score=38.2]} {Human: ENSG00000066248, NGEF, neuronal guanine nucleotide exchange factor, [RH, Score=226, Expect=3e-64]; ENSG00000130762, ARHGEF16, Rho guanine nucleotide exchange factor 16, [RH, Score=224, Expect=1e-62]; ENSG00000114790, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=218, Expect=9e-60]; ENSG00000277101, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=218, Expect=9e-60]} {Mouse: ENSMUSG00000026259, Ngef, neuronal guanine nucleotide exchange factor, [RH, Score=231, Expect=2e-65]} {Dmel: FBgn0261547, Exn, Ephexin, [RH, Score=214, Expect=2e-58]} {Celegans: WBGene00019487, ephx-1, EPHeXin (Eph-interacting GEF) homolog, [Score=215, Expect=2e-60]} {Smed: dd_Smed_v6_1847_0_10, dd_Smed_v6_1847_0_10, [RH, Score=184, Expect=3e-49]} {RNA1509_5926} {RNA1310_1816.1} {RNA815_898.1} |
| 9. | MligTC455_10089 | 722 | 15.04 | Mlig455_033138 | Neo: - Age: - |
ZNF846 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_033138 {REF} {Length: 4160} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=62.2]; Zinc-finger double domain [PF13465.8, score=60.1]; C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc-finger of C2H2 type [PF12874.9, score=33.4]; C2H2-type zinc finger [PF13912.8, score=32.2]; Family of unknown function (DUF5810) [PF19126.2, score=21.9]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=18.6]} {Human: ENSG00000196605, ZNF846, zinc finger protein 846, [Score=106, Expect=5e-24]; ENSG00000160352, ZNF714, zinc finger protein 714, [Score=103, Expect=7e-23]; ENSG00000197937, ZNF347, zinc finger protein 347, [Score=102, Expect=1e-22]; ENSG00000167394, ZNF668, zinc finger protein 668, [Score=102, Expect=2e-22]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=102, Expect=1e-22]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=101, Expect=3e-22]; ENSG00000196391, ZNF774, zinc finger protein 774, [Score=101, Expect=2e-22]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=105, Expect=1e-23]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=105, Expect=2e-23]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=103, Expect=2e-23]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=103, Expect=1e-23]; ENSMUSG00000059423, Zfp933, zinc finger protein 933, [Score=101, Expect=1e-22]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=100, Expect=4e-23]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=100, Expect=3e-22]} {Dmel: FBgn0004618, gl, glass, [Score=99.0, Expect=8e-22]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=85.9, Expect=5e-19]} {Smed: dd_Smed_v6_75162_0_1, dd_Smed_v6_75162_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_13642, RNA1509_21123} {RNA1310_22833.1, RNA1509_13642, RNA1509_21123} {RNA1509_13642, RNA1509_21123, RNA815_12444} |
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