TomoSeq data search

Data search

Results for MligTC455_10237

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10237

32

0.66

Mlig455_067157

Neo: -

Age: -

Mlig455_067157 {REF} {Length: 323} {NoTransDecoderORF}

Cumulative graph for MligTC455_10237

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.472	0.594	0.99993	1.00000
RegionR2	4.186	0.594	0.99984	1.00000
RegionR3	0.852	0.594	1.00000	1.00000
RegionR4	-3.375	0.594	0.99970	1.00000
RegionR5	-0.444	0.594	0.99984	1.00000
RegionR6	0.921	0.594	1.00000	1.00000
RegionR7	1.037	0.594	0.99998	1.00000
RegionR8	1.295	0.594	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.397	0.594	0.99998	1.00000
RegenerationR2	3.921	0.594	0.00051	0.03095
RegenerationR3	3.755	0.594	0.00469	0.12345
RegenerationR4	3.237	0.594	0.99980	1.00000
RegenerationR5	5.368	0.594	0.00008	0.01231
RegenerationR6	2.071	0.594	0.99986	1.00000
RegenerationBL	1.532	0.594	0.99992	1.00000
RegenerationTP	4.78	0.594	0.00675	0.13863

Genes with expression patterns similar to MligTC455_10237

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10237	32	0.66	Mlig455_067157	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_067157 {REF} {Length: 323} {NoTransDecoderORF}
2.	MligTC455_34522	167	3.47	Mlig455_070724	Neo: Irradiation Age: logFC(26M/2M)=0.548 Region-enriched R5: 1.392/0.01920	ANKLE2	0.979	-	-	-	-	0.979	-	Mlig455_070724 {REF} {Length: 5915} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.1]; Ankyrin repeats (many copies) [PF13857.8, score=42.8]; Ankyrin repeats (many copies) [PF13637.8, score=37.4]; Ankyrin repeat [PF00023.32, score=30.9]; Ankyrin repeat [PF13606.8, score=28.5]} {Human: ENSG00000176915, ANKLE2, ankyrin repeat and LEM domain containing 2, [RH, Score=122, Expect=9e-28]} {Mouse: ENSMUSG00000029501, Ankle2, ankyrin repeat and LEM domain containing 2, [RH, Score=124, Expect=1e-28]} {Dmel: FBgn0028343, Ankle2, Ankyrin repeat and LEM domain containing 2, [RH, Score=129, Expect=4e-30]} {Celegans: WBGene00021945, lem-4, Ankyrin repeat and LEM domain-containing protein 2 homolog, [RH, Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_14491_0_1, dd_Smed_v6_14491_0_1, [RH, Score=165, Expect=1e-42]} {RNA1509_22162} {RNA1310_6280.1} {RNA815_6517}
3.	MligTC455_19235	18	0.38	Mlig455_013768	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_013768 {REF} {Length: 2312} {Pfam: Glycine rich protein [PF12810.9, score=36.9]; PAN domain [PF00024.28, score=24.7]} {RNA1310_126710} {RNA815_35307}
4.	MligTC455_13579	47	0.98	Mlig455_027709	Neo: Int S/G2/M Age: logFC(26M/2M)=0.544		0.976	-	-	-	-	0.976	-	Mlig455_027709 {REF} {Length: 1171} {NoTransDecoderORF} {RNA1509_29723, RNA1509_33578, RNA1509_57257} {RNA1310_30147, RNA1509_29723, RNA1509_33578, RNA1509_57257} {RNA1509_29723, RNA1509_33578, RNA1509_57257, RNA815_20083}
5.	MligTC455_28369	31	0.64	Mlig455_057050	Neo: - Age: Down-Down-Up	ADAM8	0.973	-	-	-	-	0.973	-	Mlig455_057050 {REF} {Length: 3660} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=124.6]; Metallo-peptidase family M12 [PF13688.8, score=66.1]; ADAM cysteine-rich [PF08516.14, score=53.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=33.7]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=31.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.6]; Matrixin [PF00413.26, score=20.4]} {Human: ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [Score=144, Expect=3e-35]} {Mouse: ENSMUSG00000025473, Adam8, a disintegrin and metallopeptidase domain 8, [Score=129, Expect=2e-30]; ENSMUSG00000050190, Gm5346, predicted gene 5346, [Score=129, Expect=1e-30]; ENSMUSG00000072647, Adam1a, a disintegrin and metallopeptidase domain 1a, [Score=127, Expect=7e-30]; ENSMUSG00000079058, Adam34, a disintegrin and metallopeptidase domain 34, [Score=123, Expect=1e-28]} {Dmel: FBgn0265140, Meltrin, [Score=173, Expect=1e-44]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=115, Expect=4e-26]} {Smed: dd_Smed_v6_10958_0_2, dd_Smed_v6_10958_0_2, [Score=113, Expect=4e-26]} {RNA1509_7654} {RNA1310_9319.1} {RNA815_4173.1}
6.	MligTC455_16210	16	0.33	Mlig455_027851	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_027851 {REF} {Length: 287} {NoTransDecoderORF}
7.	MligTC455_28553	222	4.63	Mlig455_018182	Neo: - Age: -	TASP1	0.969	-	-	-	-	0.969	-	Mlig455_018182 {REF} {Length: 4668} {TRANSSPLICED} {Pfam: Asparaginase [PF01112.20, score=105.4]} {Human: ENSG00000089123, TASP1, taspase 1, [Score=182, Expect=2e-52]} {Mouse: ENSMUSG00000039033, Tasp1, taspase, threonine aspartase 1, [Score=168, Expect=1e-47]} {Dmel: FBgn0263602, Tasp1, Taspase 1, [Score=121, Expect=9e-31]} {Smed: dd_Smed_v6_8716_1_1, dd_Smed_v6_8716_1_1, [RH, Score=160, Expect=2e-45]} {RNA1509_45707, RNA1509_8921} {RNA1310_17191, RNA1509_45707} {RNA1509_45707, RNA815_11761}
8.	MligTC455_39667	106	2.2	Mlig455_070895	Neo: Irradiation Age: logFC(26M/2M)=0.457 Region-enriched R5: 2.946/0.01574	SH3RF3	0.966	-	-	-	-	0.966	-	Mlig455_070895 {REF} {Length: 4013} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=25.1} {Pfam: Variant SH3 domain [PF14604.8, score=33.4]; Variant SH3 domain [PF07653.19, score=30.9]; SH3 domain [PF00018.30, score=28.4]} {Human: ENSG00000172985, SH3RF3, SH3 domain containing ring finger 3, [Score=51.2, Expect=6e-07]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=50.4, Expect=1e-06]} {Mouse: ENSMUSG00000037990, Sh3rf3, SH3 domain containing ring finger 3, [Score=50.4, Expect=7e-07]; ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=50.1, Expect=8e-07]; ENSMUSG00000057719, Sh3rf2, SH3 domain containing ring finger 2, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_690_0_1, dd_Smed_v6_690_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_40946, RNA1509_44397} {RNA1310_24585, RNA1509_44397} {RNA1509_44397, RNA815_5406}

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