Data search
Results for MligTC455_39667
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39667 | 106 | 2.20 | Mlig455_070895 | Neo: Irradiation Age: logFC(26M/2M)=0.457 Region-enriched R5: 2.946/0.01574 |
SH3RF3 | Mlig455_070895 {REF} {Length: 4013} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=25.1} {Pfam: Variant SH3 domain [PF14604.8, score=33.4]; Variant SH3 domain [PF07653.19, score=30.9]; SH3 domain [PF00018.30, score=28.4]} {Human: ENSG00000172985, SH3RF3, SH3 domain containing ring finger 3, [Score=51.2, Expect=6e-07]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=50.4, Expect=1e-06]} {Mouse: ENSMUSG00000037990, Sh3rf3, SH3 domain containing ring finger 3, [Score=50.4, Expect=7e-07]; ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=50.1, Expect=8e-07]; ENSMUSG00000057719, Sh3rf2, SH3 domain containing ring finger 2, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_690_0_1, dd_Smed_v6_690_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_40946, RNA1509_44397} {RNA1310_24585, RNA1509_44397} {RNA1509_44397, RNA815_5406} |
Cumulative graph for MligTC455_39667
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.015 | 1.886 | 0.99984 | 1.00000 | |
| RegionR2 | 1.514 | 1.886 | 0.23377 | 0.60704 | |
| RegionR3 | 1.829 | 1.886 | 0.11264 | 0.58405 | |
| RegionR4 | 2.13 | 1.886 | 0.04276 | 0.17341 | |
| RegionR5 | 2.946 | 1.886 | 0.00174 | 0.01574 | |
| RegionR6 | 1.406 | 1.886 | 0.26474 | 0.85255 | |
| RegionR7 | -3.892 | 1.886 | 0.30173 | 0.93660 | |
| RegionR8 | -0.918 | 1.886 | 0.97141 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.345 | 1.886 | 0.80093 | 1.00000 | |
| RegenerationR2 | 0.281 | 1.886 | 0.72619 | 0.96435 | |
| RegenerationR3 | -0.019 | 1.886 | 0.99023 | 1.00000 | |
| RegenerationR4 | 0.311 | 1.886 | 0.72117 | 0.96193 | |
| RegenerationR5 | 0.965 | 1.886 | 0.16749 | 0.59403 | |
| RegenerationR6 | 1.293 | 1.886 | 0.19117 | 0.52936 | |
| RegenerationBL | 2.62 | 1.886 | 0.07345 | 0.31621 | |
| RegenerationTP | 3.366 | 1.886 | 0.07987 | 0.44986 |
Genes with expression patterns similar to MligTC455_39667
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39667 | 106 | 2.2 | Mlig455_070895 | Neo: Irradiation Age: logFC(26M/2M)=0.457 Region-enriched R5: 2.946/0.01574 |
SH3RF3 | 5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070895 {REF} {Length: 4013} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=25.1} {Pfam: Variant SH3 domain [PF14604.8, score=33.4]; Variant SH3 domain [PF07653.19, score=30.9]; SH3 domain [PF00018.30, score=28.4]} {Human: ENSG00000172985, SH3RF3, SH3 domain containing ring finger 3, [Score=51.2, Expect=6e-07]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=50.4, Expect=1e-06]} {Mouse: ENSMUSG00000037990, Sh3rf3, SH3 domain containing ring finger 3, [Score=50.4, Expect=7e-07]; ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=50.1, Expect=8e-07]; ENSMUSG00000057719, Sh3rf2, SH3 domain containing ring finger 2, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_690_0_1, dd_Smed_v6_690_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_40946, RNA1509_44397} {RNA1310_24585, RNA1509_44397} {RNA1509_44397, RNA815_5406} |
| 2. | MligTC455_48930 | 897 | 18.69 | Mlig455_062351, Mlig455_062364, Mlig455_062383 | Neo: - Age: logFC(26M/2M)=-0.487 Regeneration-enriched BL: 1.778 |
SNRPB2 | 1.709 | - | - | - | 0.959 | - | 0.750 | Mlig455_062351 {REF} {Length: 3624} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935, RNA1509_25711} {RNA1310_2913, RNA1509_25711} {RNA1509_25711, RNA815_7310} Mlig455_062364 {REF} {Length: 2011} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935} {RNA1310_2913} {RNA815_7310} Mlig455_062383 {REF} {Length: 2026} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.5]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=202, Expect=5e-65]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=192, Expect=5e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=206, Expect=1e-66]} {Dmel: FBgn0003449, snf, sans fille, [Score=175, Expect=9e-55]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=199, Expect=6e-64]} {RNA1509_22935, RNA1509_35461} {RNA1310_2913, RNA1509_35461} {RNA1509_35461, RNA815_7310} |
| 3. | MligTC455_48334 | 3379 | 70.4 | Mlig455_016007, Mlig455_016011 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.240 Region-enriched R4: 1.214/0.00484 Regeneration-upregulated BL: 1.367 Regeneration-enriched BL: 1.367 |
STT3A | 1.689 | - | - | 0.723 | 0.966 | - | - | Mlig455_016007 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_2426} {RNA1310_7279} {RNA815_3344} Mlig455_016011 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=491.8]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.2]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_2426} {RNA1310_7279, RNA1509_2426} {RNA1509_2426, RNA815_3344} |
| 4. | MligTC455_13579 | 47 | 0.98 | Mlig455_027709 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.544 |
0.976 | - | - | - | - | 0.976 | - | Mlig455_027709 {REF} {Length: 1171} {NoTransDecoderORF} {RNA1509_29723, RNA1509_33578, RNA1509_57257} {RNA1310_30147, RNA1509_29723, RNA1509_33578, RNA1509_57257} {RNA1509_29723, RNA1509_33578, RNA1509_57257, RNA815_20083} | |
| 5. | MligTC455_39238 | 96 | 2 | Mlig455_041933 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.282/0.00957 Regeneration-upregulated BL: 6.269 Regeneration-enriched BL: 6.269 |
DAGLA | 0.974 | - | - | - | - | - | 0.974 | Mlig455_041933 {REF} {Length: 6084} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=132.1]; Lipase (class 3) [PF01764.27, score=39.4]; Kinase-like [PF14531.8, score=23.7]} {Human: ENSG00000134780, DAGLA, diacylglycerol lipase alpha, [RH, Score=372, Expect=1e-108]} {Mouse: ENSMUSG00000035735, Dagla, diacylglycerol lipase, alpha, [RH, Score=375, Expect=7e-110]} {Dmel: FBgn0261244, inaE, inactivation no afterpotential E, [RH, Score=414, Expect=1e-121]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=173, Expect=1e-47]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=172, Expect=2e-47]} {RNA1509_57837} {RNA1310_16007} {RNA815_3790.1} |
| 6. | MligTC455_39059 | 16 | 0.33 | Mlig455_025569 | Neo: - Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_025569 {REF} {Length: 3456} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_37741} {RNA815_22616.1} | |
| 7. | MligTC455_26835 | 1127 | 23.48 | Mlig455_010954, Mlig455_033107, Mlig455_033135 | Neo: - Age: Down-Down-Up |
0.972 | - | - | - | 0.972 | - | - | Mlig455_010954 {REF} {Length: 3832} {Pfam: Fibronectin type III domain [PF00041.23, score=20.8]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1} Mlig455_033107 {REF} {Length: 3799} {Pfam: Immunoglobulin domain [PF13927.8, score=34.9]; Immunoglobulin I-set domain [PF07679.18, score=34.6]; Immunoglobulin domain [PF13895.8, score=31.0]; Immunoglobulin domain [PF00047.27, score=21.2]; Fibronectin type III domain [PF00041.23, score=21.0]} {RNA1509_13217} {RNA1310_2979.1, RNA1509_13217} {RNA1509_13217, RNA815_922.1} Mlig455_033135 {REF} {Length: 3753} {Pfam: Immunoglobulin domain [PF13927.8, score=34.3]; Immunoglobulin I-set domain [PF07679.18, score=34.2]; Immunoglobulin domain [PF13895.8, score=30.9]; Fibronectin type III domain [PF00041.23, score=21.6]; Immunoglobulin domain [PF00047.27, score=20.3]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1} |
|
| 8. | MligTC455_30213 | 8844 | 184.24 | Mlig455_010339 | Neo: - Age: logFC(26M/2M)=0.253 Region-enriched R5: 1.368/0.00000 Regeneration-upregulated BL: 1.090 Regeneration-enriched BL: 1.090 |
SEC61B | 0.971 | - | - | - | - | - | 0.971 | Mlig455_010339 {REF} {Length: 1341} {Pfam: Sec61beta family [PF03911.18, score=69.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=126, Expect=7e-39]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=126, Expect=3e-39]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=4e-32]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=92.4, Expect=4e-26]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=112, Expect=5e-34]} {RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1310_29478.1, RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1509_12138, RNA1509_2065, RNA1509_36570, RNA815_15688} |
| 9. | MligTC455_30212 | 8627 | 179.72 | Mlig455_009854 | Neo: - Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.330/0.00000 Regeneration-upregulated BL: 1.070 Regeneration-enriched BL: 1.070 |
SEC61B | 0.969 | - | - | - | - | - | 0.969 | Mlig455_009854 {REF} {Length: 2918} {Pfam: Sec61beta family [PF03911.18, score=68.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=126, Expect=9e-38]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=127, Expect=5e-38]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=125, Expect=2e-37]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=93.2, Expect=3e-25]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=110, Expect=1e-31]} {RNA1509_12138, RNA1509_20916, RNA1509_4964} {RNA1310_29478.1, RNA1509_20916, RNA1509_4964} {RNA1509_20916, RNA1509_4964, RNA815_15688} |
| 10. | MligTC455_08727 | 15 | 0.31 | Mlig455_036809 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_036809 {REF} {Length: 2288} {RNA1509_4847} {RNA1310_36270} {RNA815_652.1} | |
| 11. | MligTC455_10237 | 32 | 0.66 | Mlig455_067157 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_067157 {REF} {Length: 323} {NoTransDecoderORF} | |
| 12. | MligTC455_14558 | 332 | 6.93 | Mlig455_069112 | Neo: - Age: Down-Up-Down |
ETFRF1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_069112 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=40.9]; Complex1_LYR-like [PF13233.8, score=27.6]} {Human: ENSG00000205707, ETFRF1, electron transfer flavoprotein regulatory factor 1, [RH, Score=98.2, Expect=1e-27]} {Mouse: ENSMUSG00000040370, Etfrf1, electron transfer flavoprotein regulatory factor 1, [RH, Score=119, Expect=5e-36]} {Dmel: FBgn0040985, CG6115, [RH, Score=75.5, Expect=4e-19]} {Celegans: WBGene00012780, Y42A5A.5, [RH, Score=115, Expect=8e-35]} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1310_65323, RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380, RNA815_18968.1} |
| 13. | MligTC455_16210 | 16 | 0.33 | Mlig455_027851 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_027851 {REF} {Length: 287} {NoTransDecoderORF} | |
| 14. | MligTC455_34522 | 167 | 3.47 | Mlig455_070724 | Neo: Irradiation Age: logFC(26M/2M)=0.548 Region-enriched R5: 1.392/0.01920 |
ANKLE2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_070724 {REF} {Length: 5915} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.1]; Ankyrin repeats (many copies) [PF13857.8, score=42.8]; Ankyrin repeats (many copies) [PF13637.8, score=37.4]; Ankyrin repeat [PF00023.32, score=30.9]; Ankyrin repeat [PF13606.8, score=28.5]} {Human: ENSG00000176915, ANKLE2, ankyrin repeat and LEM domain containing 2, [RH, Score=122, Expect=9e-28]} {Mouse: ENSMUSG00000029501, Ankle2, ankyrin repeat and LEM domain containing 2, [RH, Score=124, Expect=1e-28]} {Dmel: FBgn0028343, Ankle2, Ankyrin repeat and LEM domain containing 2, [RH, Score=129, Expect=4e-30]} {Celegans: WBGene00021945, lem-4, Ankyrin repeat and LEM domain-containing protein 2 homolog, [RH, Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_14491_0_1, dd_Smed_v6_14491_0_1, [RH, Score=165, Expect=1e-42]} {RNA1509_22162} {RNA1310_6280.1} {RNA815_6517} |
| 15. | MligTC455_27723 | 27 | 0.56 | Mlig455_006340 | Neo: - Age: - Regeneration-upregulated R5: 6.184 Regeneration-enriched R5: 6.184 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_006340 {REF} {Length: 1455} {NoTransDecoderORF} {RNA1310_13919} {RNA815_45503.1} | |
| 16. | MligTC455_50292 | 330 | 6.88 | Mlig455_039652 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.875/0.00132 |
MLH1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_039652 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: DNA mismatch repair protein Mlh1 C-terminus [PF16413.7, score=241.0]; DNA mismatch repair protein, C-terminal domain [PF01119.21, score=103.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=34.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=26.6]} {Human: ENSG00000076242, MLH1, mutL homolog 1, [RH, Score=540, Expect=0.0]} {Mouse: ENSMUSG00000032498, Mlh1, mutL homolog 1, [RH, Score=550, Expect=0.0]} {Dmel: FBgn0011659, Mlh1, [RH, Score=484, Expect=4e-162]} {Celegans: WBGene00003373, mlh-1, MLH (MutL Homolog) family, [RH, Score=300, Expect=2e-90]} {Smed: dd_Smed_v6_6447_0_2, dd_Smed_v6_6447_0_2, [RH, Score=424, Expect=4e-138]} {RNA1509_23939} {RNA1310_7042.1, RNA1509_23939} {RNA1509_23939, RNA815_7277.1} |