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Results for MligTC455_10283

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10283 151 3.15 Mlig455_062767

Neo: -

Age: Up-Down-Down

 HERC4 Mlig455_062767 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=269.7]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=201.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=142.4]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [RH, Score=699, Expect=0.0]; ENSG00000138641, HERC3, HECT and RLD domain containing E3 ubiquitin protein ligase 3, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000020064, Herc4, hect domain and RLD 4, [RH, Score=720, Expect=0.0]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [RH, Score=683, Expect=0.0]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [RH, Score=460, Expect=2e-144]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_7831} {RNA1310_2988.1, RNA1509_7831} {RNA1509_7831, RNA815_973}

Cumulative graph for MligTC455_10283

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.325 2.345 0.41982 1.00000
RegionR2 1.89 2.345 0.07536 0.33573
RegionR3 0.417 2.345 0.57337 1.00000
RegionR4 -1.056 2.345 0.23017 0.52275
RegionR5 0.602 2.345 0.37398 0.72714
RegionR6 0.119 2.345 0.87395 1.00000
RegionR7 -0.518 2.345 0.66743 1.00000
RegionR8 -0.13 2.345 0.96276 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.966 2.345 0.75419 1.00000
RegenerationR2 -0.225 2.345 0.82611 0.99615
RegenerationR3 1.01 2.345 0.38227 0.79163
RegenerationR4 1.094 2.345 0.26433 0.71203
RegenerationR5 0.67 2.345 0.42146 0.81202
RegenerationR6 1.998 2.345 0.05913 0.30517
RegenerationBL 2.582 2.345 0.04650 0.24680
RegenerationTP -2.498 2.345 0.30772 0.75270


Genes with expression patterns similar to MligTC455_10283

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10283 151 3.15 Mlig455_062767

Neo: -

Age: Up-Down-Down

 HERC4 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_062767 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=269.7]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=201.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=142.4]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [RH, Score=699, Expect=0.0]; ENSG00000138641, HERC3, HECT and RLD domain containing E3 ubiquitin protein ligase 3, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000020064, Herc4, hect domain and RLD 4, [RH, Score=720, Expect=0.0]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [RH, Score=683, Expect=0.0]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [RH, Score=460, Expect=2e-144]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_7831} {RNA1310_2988.1, RNA1509_7831} {RNA1509_7831, RNA815_973}
2. MligTC455_28428 622 12.96 Mlig455_054840

Neo: Neoblast, stringent

Age: -

 NDC80 1.689 0.961 - - - - 0.728 Mlig455_054840 {REF} {Length: 2970} {TRANSSPLICED} {Pfam: HEC/Ndc80p family [PF03801.15, score=36.5]} {Human: ENSG00000080986, NDC80, NDC80, kinetochore complex component, [RH, Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000024056, Ndc80, NDC80 kinetochore complex component, [RH, Score=63.2, Expect=6e-10]} {RNA1509_20133, RNA1509_31470} {RNA1310_11007.1, RNA1509_20133, RNA1509_31470} {RNA1509_20133, RNA1509_31470, RNA815_13191}
3. MligTC455_40651 213 4.44 Mlig455_038444

Neo: -

Age: -

 RWDD4 0.975 - - - 0.975 - - Mlig455_038444 {REF} {Length: 1155} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=58.0]} {Human: ENSG00000182552, RWDD4, RWD domain containing 4, [RH, Score=148, Expect=7e-45]} {Mouse: ENSMUSG00000031568, Rwdd4a, RWD domain containing 4A, [RH, Score=143, Expect=4e-43]} {Dmel: FBgn0032703, CG10343, [RH, Score=161, Expect=5e-50]} {Smed: dd_Smed_v6_6812_0_1, dd_Smed_v6_6812_0_1, [RH, Score=134, Expect=6e-40]} {RNA1509_21456} {RNA1310_26136.1, RNA1509_21456} {RNA1509_21456, RNA815_22650}
4. MligTC455_43774 24 0.51 Mlig455_040993

Neo: -

Age: -

 0.973 - - - 0.973 - - Mlig455_040993 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_120140}
5. MligTC455_18935 141 2.93 Mlig455_012123, Mlig455_029004

Neo: -

Age: logFC(26M/2M)=-1.032

 IRF1 0.961 - - - 0.961 - -

Mlig455_012123 {REF} {Length: 1962} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=61.2]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=58.9, Expect=3e-09]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=58.5, Expect=4e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=55.8, Expect=3e-08]} {RNA1509_44213} {RNA1310_27978.1} {RNA815_17421}

Mlig455_029004 {REF} {Length: 1330} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=59.6]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=57.4, Expect=4e-09]; ENSG00000168310, IRF2, interferon regulatory factor 2, [Score=55.1, Expect=3e-08]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=56.6, Expect=6e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=54.7, Expect=2e-08]} {RNA1310_27978.1} {RNA815_17421}
6. MligTC455_30224 418 8.7 Mlig455_045910, Mlig455_046402, Mlig455_049019

Neo: Irradiation

Age: Down-Down-Down

 PIF1 0.959 - - - 0.959 - -

Mlig455_045910 {REF} {Length: 11950} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=3e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=705, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_046402 {REF} {Length: 7812} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=2e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=736, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=2e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_049019 {REF} {Length: 5908} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=335.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.7]; AAA domain [PF13604.8, score=46.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.3]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=121, Expect=7e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=734, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=117, Expect=1e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
7. MligTC455_39260 117 2.44 Mlig455_036510

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_036510 {REF} {Length: 1933} {RNA1509_55500} {RNA1310_46864} {RNA815_57446}
8. MligTC455_54111 330 6.87 Mlig455_031536

Neo: Int S/G2/M

Age: Down-Up-Down

Region-specific R4: 4.175

Region-enriched R4: 4.555/0.00000

 CHMP1B 0.956 - - - - - 0.956 Mlig455_031536 {REF} {Length: 841} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=58.4]} {Human: ENSG00000255112, CHMP1B, charged multivesicular body protein 1B, [Score=211, Expect=3e-69]} {Mouse: ENSMUSG00000031242, 2610002M06Rik, RIKEN cDNA 2610002M06 gene, [Score=211, Expect=1e-69]; ENSMUSG00000109901, Chmp1b, charged multivesicular body protein 1B, [Score=209, Expect=8e-69]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=232, Expect=7e-78]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=225, Expect=3e-75]} {Smed: dd_Smed_v6_630_0_1, dd_Smed_v6_630_0_1, [Score=236, Expect=1e-79]} {RNA1509_28724} {RNA1310_41507, RNA1509_28724} {RNA1509_28724, RNA815_20010.2}
9. MligTC455_06263 689 14.36 Mlig455_003958, Mlig455_005986

Neo: -

Age: -

 0.955 - - - 0.955 - -

Mlig455_003958 {REF} {Length: 1857} {Pfam: Methyltransferase domain [PF08241.14, score=26.0]} {Smed: dd_Smed_v6_3714_0_1, dd_Smed_v6_3714_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_23823} {RNA1310_16396.1, RNA1509_23823} {RNA1509_23823, RNA815_10422}

Mlig455_005986 {REF} {Length: 1982} {Pfam: Methyltransferase domain [PF08241.14, score=37.0]; Methyltransferase domain [PF13649.8, score=30.6]; Methyltransferase domain [PF13847.8, score=20.1]} {Smed: dd_Smed_v6_10858_0_1, dd_Smed_v6_10858_0_1, [Score=83.2, Expect=4e-19]} {RNA1509_23823} {RNA1310_16396.1} {RNA815_10422}
10. MligTC455_13760 106 2.22 Mlig455_002596

Neo: -

Age: Up-Up-Down

 0.952 - - - 0.952 - - Mlig455_002596 {REF} {Length: 1396} {RNA1310_31120} {RNA815_31550}
11. MligTC455_40049 166 3.45 Mlig455_017607, Mlig455_058891

Neo: Irradiation

Age: Up-Down-Down

 PBRM1 0.951 - - - 0.951 - -

Mlig455_017607 {REF} {Length: 435} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=322.4]; BAH domain [PF01426.20, score=99.5]; HMG (high mobility group) box [PF00505.21, score=47.2]; HMG-box domain [PF09011.12, score=36.8]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=522, Expect=3e-155]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=525, Expect=9e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=413, Expect=4e-118]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=2e-91]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=665, Expect=0.0]} {RNA1509_5406} {RNA1310_1358} {RNA815_29359}

Mlig455_058891 {REF} {Length: 6537} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=322.4]; BAH domain [PF01426.20, score=99.5]; HMG (high mobility group) box [PF00505.21, score=47.2]; HMG-box domain [PF09011.12, score=36.8]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=522, Expect=3e-155]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=525, Expect=9e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=413, Expect=4e-118]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=2e-91]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=665, Expect=0.0]} {RNA1509_5406} {RNA1310_918.1} {RNA815_609.1}
12. MligTC455_28383 13 0.27 Mlig455_061547

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_061547 {REF} {Length: 887} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1}
13. MligTC455_46560 231 4.82 Mlig455_031727

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.001

 0.95 - - - 0.950 - - Mlig455_031727 {REF} {Length: 2186} {RNA1509_39227} {RNA1310_26502} {RNA815_11026}

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