Data search
Results for MligTC455_28383
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28383 | 13 | 0.27 | Mlig455_061547 | Neo: - Age: - |
Mlig455_061547 {REF} {Length: 887} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1} |
Cumulative graph for MligTC455_28383
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.941 | 0.683 | 0.99990 | 1.00000 | |
| RegionR2 | 1.068 | 0.683 | 0.99988 | 1.00000 | |
| RegionR3 | -0.776 | 0.683 | 0.99983 | 1.00000 | |
| RegionR4 | -0.748 | 0.683 | 0.99977 | 1.00000 | |
| RegionR5 | -1.347 | 0.683 | 0.99979 | 1.00000 | |
| RegionR6 | -0.641 | 0.683 | 0.99985 | 1.00000 | |
| RegionR7 | 0.78 | 0.683 | 0.99997 | 1.00000 | |
| RegionR8 | 0.724 | 0.683 | 0.99993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.574 | 0.683 | 0.99993 | 1.00000 | |
| RegenerationR2 | 0.591 | 0.683 | 0.60020 | 0.91556 | |
| RegenerationR3 | 4.261 | 0.683 | 0.16474 | 0.59887 | |
| RegenerationR4 | 3.177 | 0.683 | 0.30287 | 0.74456 | |
| RegenerationR5 | 4.569 | 0.683 | 0.05490 | 0.37585 | |
| RegenerationR6 | 3.403 | 0.683 | 0.11879 | 0.42372 | |
| RegenerationBL | 0.367 | 0.683 | 0.99993 | 1.00000 | |
| RegenerationTP | 0.827 | 0.683 | 0.73544 | 1.00000 |
Genes with expression patterns similar to MligTC455_28383
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28383 | 13 | 0.27 | Mlig455_061547 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_061547 {REF} {Length: 887} {RNA1509_32111} {RNA1310_40575} {RNA815_7836.1} | |
| 2. | MligTC455_28382 | 14 | 0.29 | Mlig455_040555 | Neo: - Age: - |
ALKBH3 | 1.945 | - | - | - | - | 0.971 | 0.974 | Mlig455_040555 {REF} {Length: 3636} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=62.8]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=86.7, Expect=4e-18]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=82.0, Expect=9e-17]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=73.2, Expect=5e-14]} {RNA1509_23004} {RNA1310_13243} {RNA815_38989} |
| 3. | MligTC455_21860 | 6 | 0.12 | Mlig455_010976 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_010976 {REF} {Length: 359} {NoTransDecoderORF} | |
| 4. | MligTC455_48137 | 440 | 9.16 | Mlig455_030458 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.612 |
NTPCR | 0.974 | - | - | - | - | - | 0.974 | Mlig455_030458 {REF} {Length: 782} {TRANSSPLICED} {Pfam: NTPase [PF03266.17, score=131.8]; AAA domain [PF13401.8, score=29.3]; AAA domain [PF13604.8, score=28.4]; AAA ATPase domain [PF13191.8, score=25.7]; AAA domain [PF13238.8, score=23.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.1]; AAA domain [PF13521.8, score=21.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.7]; NACHT domain [PF05729.14, score=18.9]} {Human: ENSG00000135778, NTPCR, nucleoside-triphosphatase, cancer-related, [RH, Score=119, Expect=3e-33]} {Mouse: ENSMUSG00000031851, Ntpcr, nucleoside-triphosphatase, cancer-related, [RH, Score=108, Expect=3e-29]} {Dmel: FBgn0037046, CG10581, [RH, Score=94.0, Expect=1e-23]} {RNA1509_29841} {RNA1310_37079.2} {RNA815_20458.1} |
| 5. | MligTC455_52842 | 5 | 0.1 | Mlig455_055679 | Neo: - Age: - |
ANGPTL7 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_055679 {REF} {Length: 1150} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.1]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=86.7, Expect=7e-19]; ENSG00000116147, TNR, tenascin R, [Score=86.7, Expect=2e-18]; ENSG00000120332, TNN, tenascin N, [Score=85.9, Expect=4e-18]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=82.4, Expect=6e-17]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=85.5, Expect=4e-18]; ENSMUSG00000015829, Tnr, tenascin R, [Score=84.0, Expect=1e-17]; ENSMUSG00000026938, Fcna, ficolin A, [Score=83.6, Expect=5e-18]; ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=82.8, Expect=9e-18]} {Dmel: FBgn0050280, CG30280, [Score=75.1, Expect=2e-15]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=82.4, Expect=1e-17]} {RNA1310_126384} |
| 6. | MligTC455_32232 | 9 | 0.19 | Mlig455_041146, Mlig455_070069 | Neo: - Age: - |
KCNA1, KCNA2 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_041146 {REF} {Length: 2621} {Pfam: Ion transport protein [PF00520.33, score=142.2]; BTB/POZ domain [PF02214.24, score=79.6]; Ion channel [PF07885.18, score=52.7]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=385, Expect=1e-128]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=385, Expect=3e-128]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [Score=372, Expect=3e-121]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=371, Expect=7e-122]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=385, Expect=1e-128]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=385, Expect=1e-128]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [Score=372, Expect=3e-121]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=371, Expect=1e-122]} {Dmel: FBgn0003380, Sh, Shaker, [Score=393, Expect=7e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=281, Expect=2e-89]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=549, Expect=0.0]} {RNA1509_46497} {RNA1310_11183} {RNA815_45289} Mlig455_070069 {REF} {Length: 2734} {Pfam: Ion transport protein [PF00520.33, score=142.2]; BTB/POZ domain [PF02214.24, score=79.6]; Ion channel [PF07885.18, score=52.7]} {Human: ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=385, Expect=3e-128]; ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=385, Expect=1e-128]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [Score=372, Expect=3e-121]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=371, Expect=8e-122]} {Mouse: ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=385, Expect=1e-128]; ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=385, Expect=1e-128]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [Score=371, Expect=3e-121]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=371, Expect=1e-122]; ENSMUSG00000045534, Kcna5, potassium voltage-gated channel, shaker-related subfamily, member 5, [Score=366, Expect=1e-119]} {Dmel: FBgn0003380, Sh, Shaker, [Score=394, Expect=3e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=281, Expect=2e-89]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=549, Expect=0.0]} {RNA1509_46497} {RNA1310_11183} {RNA815_45289} |
| 7. | MligTC455_54111 | 330 | 6.87 | Mlig455_031536 | Neo: Int S/G2/M Age: Down-Up-Down Region-specific R4: 4.175 Region-enriched R4: 4.555/0.00000 |
CHMP1B | 0.962 | - | - | - | - | - | 0.962 | Mlig455_031536 {REF} {Length: 841} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=58.4]} {Human: ENSG00000255112, CHMP1B, charged multivesicular body protein 1B, [Score=211, Expect=3e-69]} {Mouse: ENSMUSG00000031242, 2610002M06Rik, RIKEN cDNA 2610002M06 gene, [Score=211, Expect=1e-69]; ENSMUSG00000109901, Chmp1b, charged multivesicular body protein 1B, [Score=209, Expect=8e-69]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=232, Expect=7e-78]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=225, Expect=3e-75]} {Smed: dd_Smed_v6_630_0_1, dd_Smed_v6_630_0_1, [Score=236, Expect=1e-79]} {RNA1509_28724} {RNA1310_41507, RNA1509_28724} {RNA1509_28724, RNA815_20010.2} |
| 8. | MligTC455_15468 | 32 | 0.67 | Mlig455_047347 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_047347 {REF} {Length: 620} {RNA1509_11494} {RNA1310_44564} | |
| 9. | MligTC455_46727 | 6297 | 131.18 | Mlig455_058812 | Neo: - Age: logFC(26M/2M)=0.222 |
ACADS | 0.958 | - | - | - | - | - | 0.958 | Mlig455_058812 {REF} {Length: 1500} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=170.9]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=121.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=90.5]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=80.8]} {Human: ENSG00000122971, ACADS, acyl-CoA dehydrogenase short chain, [RH, Score=535, Expect=0.0]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [RH, Score=529, Expect=0.0]} {Dmel: FBgn0038742, Arc42, [RH, Score=534, Expect=0.0]} {Celegans: WBGene00019433, acdh-3, Acyl CoA DeHydrogenase, [RH, Score=291, Expect=4e-95]} {Smed: dd_Smed_v6_5980_0_1, dd_Smed_v6_5980_0_1, [RH, Score=516, Expect=0.0]} {RNA1509_1565, RNA1509_18468} {RNA1310_17665, RNA1509_1565, RNA1509_18468} {RNA1509_1565, RNA1509_18468, RNA815_7620} |
| 10. | MligTC455_27554 | 255 | 5.32 | Mlig455_045186 | Neo: Irradiation Age: - |
MPHOSPH8 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_045186 {REF} {Length: 4633} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=42.2]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=38.9]; Ankyrin repeats (many copies) [PF13857.8, score=28.1]; Ankyrin repeat [PF13606.8, score=27.9]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeat [PF00023.32, score=24.1]} {Human: ENSG00000196199, MPHOSPH8, M-phase phosphoprotein 8, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000079184, Mphosph8, M-phase phosphoprotein 8, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_10984_0_1, dd_Smed_v6_10984_0_1, [Score=52.4, Expect=7e-07]} {RNA1509_43422, RNA1509_43458} {RNA1310_8020, RNA1509_43422, RNA1509_43458} {RNA1509_43422, RNA1509_43458, RNA815_18069} |
| 11. | MligTC455_33910 | 13230 | 275.61 | Mlig455_070978 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.352 Region-enriched R5: 1.139/0.01306 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_070978 {REF} {Length: 1405} {RNA1509_11213, RNA1509_27323, RNA1509_56325, RNA1509_5869} {RNA1310_30511.2, RNA1509_11213, RNA1509_27323, RNA1509_56325, RNA1509_5869} {RNA1509_11213, RNA1509_27323, RNA1509_56325, RNA1509_5869, RNA815_12336.2} | |
| 12. | MligTC455_20504 | 99 | 2.06 | Mlig455_057197 | Neo: - |
BEST3 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_057197 {REF} {Length: 4679} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.4]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=166, Expect=2e-43]; ENSG00000142959, BEST4, bestrophin 4, [Score=161, Expect=5e-43]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=163, Expect=1e-42]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=193, Expect=4e-53]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=157, Expect=3e-41]} {Smed: dd_Smed_v6_1844_0_1, dd_Smed_v6_1844_0_1, [RH, Score=288, Expect=4e-92]} {RNA1509_58827} {RNA1310_25449} {RNA815_7550} |
| 13. | MligTC455_46441 | 119 | 2.48 | Mlig455_015417 | Neo: - Age: - Regeneration-enriched R6: 6.672 |
AGA | 0.951 | - | - | - | - | - | 0.951 | Mlig455_015417 {REF} {Length: 1739} {Pfam: Asparaginase [PF01112.20, score=235.9]} {Human: ENSG00000038002, AGA, aspartylglucosaminidase, [RH, Score=246, Expect=5e-77]} {Mouse: ENSMUSG00000031521, Aga, aspartylglucosaminidase, [RH, Score=232, Expect=9e-72]} {Dmel: FBgn0033431, CG1827, [RH, Score=260, Expect=5e-82]} {Celegans: WBGene00019867, R04B3.2, Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase Glycosylasparaginase alpha chain Glycosylasparaginase beta chain, [RH, Score=204, Expect=5e-61]} {Smed: dd_Smed_v6_3326_0_2, dd_Smed_v6_3326_0_2, [RH, Score=313, Expect=2e-103]} {RNA1509_8661} {RNA1310_20724.2} {RNA815_22731} |
| 14. | MligTC455_52811 | 39 | 0.81 | Mlig455_031331 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.422/0.02134 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_031331 {REF} {Length: 492} {NoTransDecoderORF} {RNA1509_47533} {RNA1310_79837.2} {RNA815_48370} | |
| 15. | MligTC455_10283 | 151 | 3.15 | Mlig455_062767 | Neo: - Age: Up-Down-Down |
HERC4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_062767 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=269.7]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=201.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=142.4]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [RH, Score=699, Expect=0.0]; ENSG00000138641, HERC3, HECT and RLD domain containing E3 ubiquitin protein ligase 3, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000020064, Herc4, hect domain and RLD 4, [RH, Score=720, Expect=0.0]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [RH, Score=683, Expect=0.0]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [RH, Score=460, Expect=2e-144]} {Smed: dd_Smed_v6_8701_0_1, dd_Smed_v6_8701_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_7831} {RNA1310_2988.1, RNA1509_7831} {RNA1509_7831, RNA815_973} |
Berezikov Lab - 2020-2021 © ERIBA