Data search
Results for MligTC455_10404
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10404 | 29 | 0.60 | Mlig455_062566 | Neo: - Age: - |
Mlig455_062566 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1310_101139} |
Cumulative graph for MligTC455_10404
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.706 | 0.7 | 0.99993 | 1.00000 | |
| RegionR2 | 4.331 | 0.7 | 0.99993 | 1.00000 | |
| RegionR3 | 1.354 | 0.7 | 0.99993 | 1.00000 | |
| RegionR4 | -3.637 | 0.7 | 0.99990 | 1.00000 | |
| RegionR5 | -0.213 | 0.7 | 0.99992 | 1.00000 | |
| RegionR6 | 0.714 | 0.7 | 0.99996 | 1.00000 | |
| RegionR7 | 1.491 | 0.7 | 0.99997 | 1.00000 | |
| RegionR8 | 0.664 | 0.7 | 0.99999 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.516 | 0.7 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.416 | 0.7 | 0.99955 | 1.00000 | |
| RegenerationR3 | 1.9 | 0.7 | 0.99991 | 1.00000 | |
| RegenerationR4 | 3.672 | 0.7 | 0.99964 | 1.00000 | |
| RegenerationR5 | 0.801 | 0.7 | 0.99955 | 1.00000 | |
| RegenerationR6 | 1.441 | 0.7 | 0.99979 | 1.00000 | |
| RegenerationBL | -1.218 | 0.7 | 0.99993 | 1.00000 | |
| RegenerationTP | 3.012 | 0.7 | 0.99986 | 1.00000 |
Genes with expression patterns similar to MligTC455_10404
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10404 | 29 | 0.6 | Mlig455_062566 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_062566 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1310_101139} | |
| 2. | MligTC455_30052 | 18 | 0.38 | Mlig455_034711 | Neo: - Age: Up-Down-Down Region-enriched R2: 7.452/0.01054 |
0.983 | - | - | - | - | 0.983 | - | Mlig455_034711 {REF} {Length: 3673} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=48.9, Expect=2e-06]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1} | |
| 3. | MligTC455_29942 | 8 | 0.16 | Mlig455_041761 | Neo: - Age: - |
FYN | 0.975 | - | - | - | - | 0.975 | - | Mlig455_041761 {REF} {Length: 3358} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.7]; Protein kinase domain [PF00069.27, score=114.4]; SH2 domain [PF00017.26, score=65.1]; SH3 domain [PF00018.30, score=34.4]; Variant SH3 domain [PF14604.8, score=24.8]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=461, Expect=3e-153]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=438, Expect=1e-144]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=461, Expect=1e-153]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=444, Expect=2e-147]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=435, Expect=1e-144]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [Score=506, Expect=2e-169]} {RNA1509_6282} {RNA1310_48079.1} {RNA815_1602} |
| 4. | MligTC455_32272 | 205 | 4.28 | Mlig455_038695 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.515 Region-enriched R4: 2.260/0.01378 |
ABCA8 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_038695 {REF} {Length: 5322} {Pfam: ABC transporter [PF00005.29, score=175.7]; ABC-2 family transporter protein [PF12698.9, score=74.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=69.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.0]; AAA domain [PF13476.8, score=23.3]; AAA ATPase domain [PF13191.8, score=22.5]; RsgA GTPase [PF03193.18, score=21.0]; AAA domain [PF13401.8, score=19.3]; AAA ATPase domain [PF13175.8, score=18.8]} {Human: ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=4e-57]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=220, Expect=4e-58]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=215, Expect=1e-55]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=218, Expect=1e-56]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=211, Expect=2e-54]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=209, Expect=6e-54]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=200, Expect=3e-51]} {Smed: dd_Smed_v6_2300_0_9, dd_Smed_v6_2300_0_9, [Score=208, Expect=4e-54]} {RNA1509_27825} {RNA1310_1329, RNA1509_27825} {RNA1509_27825, RNA815_4723} |
| 5. | MligTC455_40128 | 390 | 8.12 | Mlig455_054771, Mlig455_054798 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_054771 {REF} {Length: 2531} {RNA1509_55498} {RNA1310_44145} {RNA815_38949} Mlig455_054798 {REF} {Length: 2333} {RNA1509_55498} {RNA1310_44145} {RNA815_38949} |
|
| 6. | MligTC455_32271 | 284 | 5.92 | Mlig455_038682 | Neo: Germline Age: Up-Down-Down Region-specific R4: 5.758 Region-enriched R4: 2.652/0.00769 |
ABCA8 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_038682 {REF} {Length: 4141} {Pfam: ABC transporter [PF00005.29, score=126.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=45.9]; ABC-2 family transporter protein [PF12698.9, score=40.9]; AAA domain [PF13476.8, score=23.6]; AAA ATPase domain [PF13191.8, score=21.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=20.6]; RsgA GTPase [PF03193.18, score=20.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.5]; AAA domain [PF13401.8, score=18.9]; P-loop containing region of AAA domain [PF13555.8, score=18.9]} {Human: ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=5e-58]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=212, Expect=2e-55]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=212, Expect=3e-55]} {Mouse: ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=209, Expect=1e-54]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=206, Expect=1e-53]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=206, Expect=8e-54]; ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=205, Expect=2e-53]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=199, Expect=1e-51]} {Dmel: FBgn0031170, CG1718, [Score=186, Expect=2e-47]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=179, Expect=3e-45]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=178, Expect=3e-45]} {RNA1509_21877} {RNA1310_865.2} {RNA815_4723} |
Berezikov Lab - 2020-2021 © ERIBA