TomoSeq data search

Data search

Results for MligTC455_29942

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29942

8

0.16

Mlig455_041761

Neo: -

Age: -

FYN

Mlig455_041761 {REF} {Length: 3358} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.7]; Protein kinase domain [PF00069.27, score=114.4]; SH2 domain [PF00017.26, score=65.1]; SH3 domain [PF00018.30, score=34.4]; Variant SH3 domain [PF14604.8, score=24.8]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=461, Expect=3e-153]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=438, Expect=1e-144]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=461, Expect=1e-153]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=444, Expect=2e-147]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=435, Expect=1e-144]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [Score=506, Expect=2e-169]} {RNA1509_6282} {RNA1310_48079.1} {RNA815_1602}

Cumulative graph for MligTC455_29942

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.797	0.524	0.99991	1.00000
RegionR2	3.704	0.524	0.99989	1.00000
RegionR3	1.417	0.524	0.99993	1.00000
RegionR4	-2.78	0.524	0.99981	1.00000
RegionR5	0.219	0.524	0.99996	1.00000
RegionR6	1.044	0.524	0.99998	1.00000
RegionR7	1.179	0.524	0.99997	1.00000
RegionR8	0.013	0.524	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.912	0.524	0.99998	1.00000
RegenerationR2	1.284	0.524	0.99983	1.00000
RegenerationR3	0.251	0.524	0.99991	1.00000
RegenerationR4	3.384	0.524	0.99957	1.00000
RegenerationR5	0.561	0.524	0.99956	1.00000
RegenerationR6	0.15	0.524	0.99995	1.00000
RegenerationBL	-0.123	0.524	0.99996	1.00000
RegenerationTP	3.199	0.524	0.99981	1.00000

Genes with expression patterns similar to MligTC455_29942

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29942	8	0.16	Mlig455_041761	Neo: - Age: -	FYN	1	-	-	-	-	1.000	-	Mlig455_041761 {REF} {Length: 3358} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.7]; Protein kinase domain [PF00069.27, score=114.4]; SH2 domain [PF00017.26, score=65.1]; SH3 domain [PF00018.30, score=34.4]; Variant SH3 domain [PF14604.8, score=24.8]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=461, Expect=3e-153]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=438, Expect=1e-144]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=461, Expect=1e-153]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=444, Expect=2e-147]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=435, Expect=1e-144]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [Score=506, Expect=2e-169]} {RNA1509_6282} {RNA1310_48079.1} {RNA815_1602}
2.	MligTC455_10404	29	0.6	Mlig455_062566	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_062566 {REF} {Length: 1079} {NoTransDecoderORF} {RNA1310_101139}
3.	MligTC455_15986	139	2.9	Mlig455_048132	Neo: - Age: - Region-enriched R8: 5.016/0.00239 Region-enriched R7: 4.765/0.00007		0.963	-	-	-	-	0.963	-	Mlig455_048132 {REF} {Length: 1543} {RNA1509_47436} {RNA1310_22809.1} {RNA815_55300}
4.	MligTC455_30052	18	0.38	Mlig455_034711	Neo: - Age: Up-Down-Down Region-enriched R2: 7.452/0.01054		0.955	-	-	-	-	0.955	-	Mlig455_034711 {REF} {Length: 3673} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=48.9, Expect=2e-06]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}
5.	MligTC455_40128	390	8.12	Mlig455_054771, Mlig455_054798	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_054771 {REF} {Length: 2531} {RNA1509_55498} {RNA1310_44145} {RNA815_38949} Mlig455_054798 {REF} {Length: 2333} {RNA1509_55498} {RNA1310_44145} {RNA815_38949}
6.	MligTC455_23331	165	3.43	Mlig455_016108, Mlig455_036912	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_016108 {REF} {Length: 1041} {NoTransDecoderORF} {RNA1509_24217} {RNA1310_48796} {RNA815_25805} Mlig455_036912 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_24217} {RNA1310_48796} {RNA815_25805}
7.	MligTC455_32272	205	4.28	Mlig455_038695	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.515 Region-enriched R4: 2.260/0.01378	ABCA8	0.953	-	-	-	-	0.953	-	Mlig455_038695 {REF} {Length: 5322} {Pfam: ABC transporter [PF00005.29, score=175.7]; ABC-2 family transporter protein [PF12698.9, score=74.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=69.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.0]; AAA domain [PF13476.8, score=23.3]; AAA ATPase domain [PF13191.8, score=22.5]; RsgA GTPase [PF03193.18, score=21.0]; AAA domain [PF13401.8, score=19.3]; AAA ATPase domain [PF13175.8, score=18.8]} {Human: ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=4e-57]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=220, Expect=4e-58]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=215, Expect=1e-55]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=218, Expect=1e-56]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=211, Expect=2e-54]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=209, Expect=6e-54]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=200, Expect=3e-51]} {Smed: dd_Smed_v6_2300_0_9, dd_Smed_v6_2300_0_9, [Score=208, Expect=4e-54]} {RNA1509_27825} {RNA1310_1329, RNA1509_27825} {RNA1509_27825, RNA815_4723}

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