Data search
Results for MligTC455_10496
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10496 | 4778 | 99.55 | Mlig455_062822 | Neo: Int S/G2/M Age: - |
Mlig455_062822 {REF} {Length: 1721} {TRANSSPLICED} {RNA1509_1084, RNA1509_3436, RNA1509_4227} {RNA1310_11603.1, RNA1509_3436, RNA1509_4227} {RNA1509_3436, RNA1509_4227, RNA815_6849.1} |
Cumulative graph for MligTC455_10496
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.064 | 6.777 | 0.00026 | 0.05386 | |
| RegionR2 | 0.227 | 6.777 | 0.40551 | 0.79946 | |
| RegionR3 | 0.538 | 6.777 | 0.01571 | 0.20296 | |
| RegionR4 | 0.295 | 6.777 | 0.25533 | 0.55601 | |
| RegionR5 | 0.282 | 6.777 | 0.19372 | 0.47931 | |
| RegionR6 | 0.525 | 6.777 | 0.01976 | 0.25275 | |
| RegionR7 | 0.522 | 6.777 | 0.03280 | 0.34491 | |
| RegionR8 | -0.324 | 6.777 | 0.30124 | 0.93168 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.137 | 6.777 | 0.86921 | 1.00000 | |
| RegenerationR2 | -0.052 | 6.777 | 0.83717 | 1.00000 | |
| RegenerationR3 | -0.201 | 6.777 | 0.45203 | 0.83282 | |
| RegenerationR4 | 0 | 6.777 | 0.99863 | 1.00000 | |
| RegenerationR5 | -0.004 | 6.777 | 0.98721 | 1.00000 | |
| RegenerationR6 | -0.162 | 6.777 | 0.54831 | 0.83825 | |
| RegenerationBL | 0.026 | 6.777 | 0.92210 | 1.00000 | |
| RegenerationTP | 0.7 | 6.777 | 0.01143 | 0.18187 |
Genes with expression patterns similar to MligTC455_10496
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10496 | 4778 | 99.55 | Mlig455_062822 | Neo: Int S/G2/M Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062822 {REF} {Length: 1721} {TRANSSPLICED} {RNA1509_1084, RNA1509_3436, RNA1509_4227} {RNA1310_11603.1, RNA1509_3436, RNA1509_4227} {RNA1509_3436, RNA1509_4227, RNA815_6849.1} | |
| 2. | MligTC455_01787 | 80 | 1.67 | Mlig455_020815 | Neo: - Age: - |
2.37 | - | - | 0.709 | 0.957 | 0.704 | - | Mlig455_020815 {REF} {Length: 1058} | |
| 3. | MligTC455_45689 | 863 | 17.97 | Mlig455_051128 | Neo: - Age: logFC(26M/2M)=0.541 |
1.751 | - | - | - | 0.958 | 0.793 | - | Mlig455_051128 {REF} {Length: 2347} {RNA1509_31908} {RNA1310_21586} {RNA815_10734.1} | |
| 4. | MligTC455_15526 | 410 | 8.54 | Mlig455_037465, Mlig455_037504 | Neo: - |
1.679 | - | - | 0.715 | 0.964 | - | - | Mlig455_037465 {REF} {Length: 2126} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.7} {RNA1509_54950} {RNA1310_28080} {RNA815_30352} Mlig455_037504 {REF} {Length: 2131} {TRANSSPLICED} {RNA1509_54950} {RNA1310_28080, RNA1509_54950} {RNA1509_54950, RNA815_30352} |
|
| 5. | MligTC455_46526 | 870 | 18.13 | Mlig455_009110 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.379 Region-enriched R7: 1.483/0.00053 |
0.981 | - | - | - | 0.981 | - | - | Mlig455_009110 {REF} {Length: 1508} {RNA1509_45105, RNA1509_9075} {RNA1310_18297, RNA1509_45105, RNA1509_9075} {RNA1509_45105, RNA1509_9075, RNA815_13910.1} | |
| 6. | MligTC455_42000 | 91 | 1.9 | Mlig455_069877 | Neo: - Age: - |
ZMIZ1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_069877 {REF} {Length: 2653} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=243, Expect=1e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=239, Expect=4e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=242, Expect=1e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=239, Expect=4e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=220, Expect=4e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=66.2, Expect=3e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=114, Expect=8e-27]} {RNA1509_6742} {RNA1310_7051} {RNA815_2879.1} |
| 7. | MligTC455_42389 | 608 | 12.66 | Mlig455_009287 | Neo: - Age: - Region-enriched R2: 2.718/0.00370 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_009287 {REF} {Length: 1730} {RNA1310_30650} {RNA815_7716.1} | |
| 8. | MligTC455_51715 | 6082 | 126.7 | Mlig455_054921 | Neo: - Age: - |
GM2A | 0.956 | - | - | - | 0.956 | - | - | Mlig455_054921 {REF} {Length: 1187} {Pfam: ML domain [PF02221.17, score=76.9]; Protein of unknown function (DUF1091) [PF06477.15, score=21.1]} {Human: ENSG00000196743, GM2A, GM2 ganglioside activator, [RH, Score=103, Expect=1e-26]} {Mouse: ENSMUSG00000000594, Gm2a, GM2 ganglioside activator protein, [RH, Score=122, Expect=2e-34]} {Smed: dd_Smed_v6_214_1_1, dd_Smed_v6_214_1_1, [Score=62.8, Expect=4e-12]} {RNA1509_11334, RNA1509_1618} {RNA1310_30369, RNA1509_11334, RNA1509_1618} {RNA1509_11334, RNA1509_1618, RNA815_13340.1} |
| 9. | MligTC455_18013 | 1047 | 21.82 | Mlig455_024228 | Neo: - Age: Down-Up-Up |
STX18 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_024228 {REF} {Length: 1006} {TRANSSPLICED} {Pfam: SNARE-complex protein Syntaxin-18 N-terminus [PF10496.11, score=20.4]} {Human: ENSG00000168818, STX18, syntaxin 18, [RH, Score=122, Expect=7e-32]} {Mouse: ENSMUSG00000029125, Stx18, syntaxin 18, [RH, Score=122, Expect=3e-32]} {Dmel: FBgn0039212, Syx18, Syntaxin 18, [RH, Score=91.7, Expect=1e-20]} {Celegans: WBGene00020425, syx-18, SYntaXin, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_11293_0_1, dd_Smed_v6_11293_0_1, [RH, Score=86.3, Expect=2e-19]} {RNA1509_16869, RNA1509_24707, RNA1509_32996, RNA1509_33576, RNA1509_3844} {RNA1310_12794, RNA1509_16869, RNA1509_24707, RNA1509_32996, RNA1509_33576} {RNA1509_16869, RNA1509_24707, RNA1509_32996, RNA1509_33576, RNA815_670} |
Berezikov Lab - 2020-2021 © ERIBA