TomoSeq data search

Data search

Results for MligTC455_15526

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15526

410

8.54

Mlig455_037465, Mlig455_037504

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.379

Mlig455_037465 {REF} {Length: 2126} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.7} {RNA1509_54950} {RNA1310_28080} {RNA815_30352}

Mlig455_037504 {REF} {Length: 2131} {TRANSSPLICED} {RNA1509_54950} {RNA1310_28080, RNA1509_54950} {RNA1509_54950, RNA815_30352}

Cumulative graph for MligTC455_15526

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.963	3.504	0.16017	0.78078
RegionR2	0.776	3.504	0.51612	0.89199
RegionR3	1.51	3.504	0.12303	0.60556
RegionR4	1.739	3.504	0.13818	0.37895
RegionR5	-0.32	3.504	0.93115	1.00000
RegionR6	1.843	3.504	0.04316	0.38918
RegionR7	0.057	3.504	0.84009	1.00000
RegionR8	0.358	3.504	0.73006	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.882	3.504	0.22938	0.95946
RegenerationR2	0.93	3.504	0.27589	0.72059
RegenerationR3	0.025	3.504	0.97979	1.00000
RegenerationR4	0.006	3.504	0.99671	1.00000
RegenerationR5	1.454	3.504	0.11595	0.51233
RegenerationR6	-0.279	3.504	0.75318	0.95363
RegenerationBL	-0.726	3.504	0.47586	0.84172
RegenerationTP	1.33	3.504	0.18322	0.61970

Genes with expression patterns similar to MligTC455_15526

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15526	410	8.54	Mlig455_037465, Mlig455_037504	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.379		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037465 {REF} {Length: 2126} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=26.7} {RNA1509_54950} {RNA1310_28080} {RNA815_30352} Mlig455_037504 {REF} {Length: 2131} {TRANSSPLICED} {RNA1509_54950} {RNA1310_28080, RNA1509_54950} {RNA1509_54950, RNA815_30352}
2.	MligTC455_10496	4778	99.55	Mlig455_062822	Neo: Int S/G2/M Age: -		1.679	-	-	0.715	0.964	-	-	Mlig455_062822 {REF} {Length: 1721} {TRANSSPLICED} {RNA1509_1084, RNA1509_3436, RNA1509_4227} {RNA1310_11603.1, RNA1509_3436, RNA1509_4227} {RNA1509_3436, RNA1509_4227, RNA815_6849.1}
3.	MligTC455_27255	154	3.2	Mlig455_033416	Neo: - Age: -	NEURL4	0.965	-	-	-	-	-	0.965	Mlig455_033416 {REF} {Length: 4906} {TRANSSPLICED} {Pfam: Neuralized [PF07177.14, score=465.9]; SPRY domain [PF00622.30, score=43.0]} {Human: ENSG00000215041, NEURL4, neuralized E3 ubiquitin protein ligase 4, [Score=348, Expect=5e-100]} {Mouse: ENSMUSG00000047284, Neurl4, neuralized E3 ubiquitin protein ligase 4, [Score=347, Expect=9e-100]} {Dmel: FBgn0283503, Neurl4, Neuralized E3 ubiquitin protein ligase 4, [RH, Score=332, Expect=2e-94]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=61.2, Expect=3e-09]} {Smed: dd_Smed_v6_10431_0_1, dd_Smed_v6_10431_0_1, [Score=177, Expect=8e-45]} {RNA1509_13074} {RNA1310_2157} {RNA815_18737}
4.	MligTC455_21052	277	5.78	Mlig455_057141	Neo: - Age: -	KRAS	0.962	0.962	-	-	-	-	-	Mlig455_057141 {REF} {Length: 4831} {Pfam: Ras family [PF00071.24, score=191.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=40.0]; RsgA GTPase [PF03193.18, score=27.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=26.8]; 50S ribosome-binding GTPase [PF01926.25, score=26.3]} {Human: ENSG00000133703, KRAS, KRAS proto-oncogene, GTPase, [RH, Score=279, Expect=1e-96]; ENSG00000174775, HRAS, HRas proto-oncogene, GTPase, [RH, Score=276, Expect=1e-95]; ENSG00000276536, HRAS, HRas proto-oncogene, GTPase, [RH, Score=276, Expect=1e-95]; ENSG00000213281, NRAS, NRAS proto-oncogene, GTPase, [RH, Score=271, Expect=1e-93]} {Mouse: ENSMUSG00000030265, Kras, Kirsten rat sarcoma viral oncogene homolog, [RH, Score=283, Expect=2e-98]; ENSMUSG00000025499, Hras, Harvey rat sarcoma virus oncogene, [RH, Score=276, Expect=9e-96]; ENSMUSG00000027852, Nras, neuroblastoma ras oncogene, [RH, Score=273, Expect=3e-94]} {Dmel: FBgn0003205, Ras85D, Ras oncogene at 85D, [RH, Score=273, Expect=1e-94]} {Celegans: WBGene00002335, let-60, Ras protein let-60, [RH, Score=264, Expect=5e-91]} {Smed: dd_Smed_v6_2885_0_1, dd_Smed_v6_2885_0_1, [RH, Score=260, Expect=1e-89]} {RNA1509_38188, RNA1509_40550} {RNA1310_45604, RNA1509_40550} {RNA1509_40550, RNA815_23702}
5.	MligTC455_46526	870	18.13	Mlig455_009110	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.379 Region-enriched R7: 1.483/0.00053		0.961	-	-	-	0.961	-	-	Mlig455_009110 {REF} {Length: 1508} {RNA1509_45105, RNA1509_9075} {RNA1310_18297, RNA1509_45105, RNA1509_9075} {RNA1509_45105, RNA1509_9075, RNA815_13910.1}
6.	MligTC455_52894	103	2.15	Mlig455_055947	Neo: - Age: Down-Down-Up	ANK3	0.959	-	-	-	0.959	-	-	Mlig455_055947 {REF} {Length: 3569} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=82.2]; Ankyrin repeats (many copies) [PF13637.8, score=78.5]; Ankyrin repeats (many copies) [PF13857.8, score=77.2]; Ankyrin repeat [PF13606.8, score=52.9]; Ankyrin repeat [PF00023.32, score=49.9]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=64.7, Expect=8e-10]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=61.2, Expect=6e-09]} {Dmel: FBgn0040372, G9a, [Score=61.6, Expect=4e-09]} {Celegans: WBGene00015646, mlt-10, [RH, Score=181, Expect=2e-47]} {Smed: dd_Smed_v6_9418_0_1, dd_Smed_v6_9418_0_1, [Score=106, Expect=7e-24]} {RNA1509_25185} {RNA1310_8316} {RNA815_7052}
7.	MligTC455_42000	91	1.9	Mlig455_069877	Neo: - Age: -	ZMIZ1	0.956	-	-	-	0.956	-	-	Mlig455_069877 {REF} {Length: 2653} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=75.9]} {Human: ENSG00000108175, ZMIZ1, zinc finger MIZ-type containing 1, [Score=243, Expect=1e-69]; ENSG00000122515, ZMIZ2, zinc finger MIZ-type containing 2, [Score=239, Expect=4e-69]} {Mouse: ENSMUSG00000007817, Zmiz1, zinc finger, MIZ-type containing 1, [Score=242, Expect=1e-69]; ENSMUSG00000041164, Zmiz2, zinc finger, MIZ-type containing 2, [Score=239, Expect=4e-69]} {Dmel: FBgn0026160, tna, tonalli, [Score=220, Expect=4e-62]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=66.2, Expect=3e-11]} {Smed: dd_Smed_v6_10016_0_1, dd_Smed_v6_10016_0_1, [Score=114, Expect=8e-27]} {RNA1509_6742} {RNA1310_7051} {RNA815_2879.1}
8.	MligTC455_44568	1898	39.55	Mlig455_050282, Mlig455_050288	Neo: - Age: Down-Down-Up		0.956	-	-	-	-	-	0.956	Mlig455_050282 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_38103} {RNA1310_23365} {RNA815_10680} Mlig455_050288 {REF} {Length: 1371} {TRANSSPLICED} {RNA1509_38103, RNA1509_40424, RNA1509_41423} {RNA1310_23365, RNA1509_38103, RNA1509_40424, RNA1509_41423} {RNA1509_38103, RNA1509_40424, RNA1509_41423, RNA815_10680}
9.	MligTC455_16670	23	0.48	Mlig455_003787	Neo: - Age: Down-Down-Up Regeneration-upregulated R2: 7.415 Regeneration-enriched R2: 7.415	ESCO2	0.955	-	-	-	-	-	0.955	Mlig455_003787 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: ESCO1/2 acetyl-transferase [PF13880.8, score=72.1]; zinc-finger of acetyl-transferase ESCO [PF13878.8, score=51.1]} {Human: ENSG00000171320, ESCO2, establishment of sister chromatid cohesion N-acetyltransferase 2, [RH, Score=128, Expect=5e-33]} {Mouse: ENSMUSG00000022034, Esco2, establishment of sister chromatid cohesion N-acetyltransferase 2, [RH, Score=122, Expect=3e-31]; ENSMUSG00000024293, Esco1, establishment of sister chromatid cohesion N-acetyltransferase 1, [RH, Score=117, Expect=9e-31]} {Celegans: WBGene00017269, F08F8.4, [RH, Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_15894_0_1, dd_Smed_v6_15894_0_1, [RH, Score=152, Expect=4e-45]} {RNA1509_38921, RNA1509_40121, RNA1509_54656} {RNA1310_33289, RNA1509_38921, RNA1509_40121} {RNA1509_38921, RNA1509_40121, RNA815_18780}
10.	MligTC455_42644	81	1.7	Mlig455_004159	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_004159 {REF} {Length: 2561} {NoTransDecoderORF} {RNA1509_1218} {RNA1310_2334.2} {RNA815_2653}
11.	MligTC455_23699	1101	22.94	Mlig455_063262	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_063262 {REF} {Length: 3844} {RNA1509_5326} {RNA1310_3123} {RNA815_678}

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