Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_10537 | 19 | 0.40 | Mlig455_007765 | Neo: - Age: - |
Mlig455_007765 {REF} {Length: 4181} {Pfam: MULE transposase domain [PF10551.11, score=50.9]} {Smed: dd_Smed_v6_40199_0_1, dd_Smed_v6_40199_0_1, [Score=77.0, Expect=9e-17]} {RNA1509_40208} {RNA1310_21348.1, RNA1509_40208} {RNA1509_40208, RNA815_35855} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 4.955 | 1.033 | 0.99992 | 1.00000 | |
RegionR2 | -1.739 | 1.033 | 0.99976 | 1.00000 | |
RegionR3 | -1.507 | 1.033 | 0.99984 | 1.00000 | |
RegionR4 | 2.093 | 1.033 | 0.99980 | 1.00000 | |
RegionR5 | -1.249 | 1.033 | 0.99986 | 1.00000 | |
RegionR6 | -1.572 | 1.033 | 0.99986 | 1.00000 | |
RegionR7 | -0.491 | 1.033 | 0.99993 | 1.00000 | |
RegionR8 | -0.49 | 1.033 | 0.99996 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -3.878 | 1.033 | 0.99990 | 1.00000 | |
RegenerationR2 | 3.07 | 1.033 | 0.02422 | 0.25626 | |
RegenerationR3 | 3.623 | 1.033 | 0.15772 | 0.58972 | |
RegenerationR4 | 2.859 | 1.033 | 0.20969 | 0.65741 | |
RegenerationR5 | 3.385 | 1.033 | 0.07383 | 0.42577 | |
RegenerationR6 | 2.565 | 1.033 | 0.23640 | 0.58381 | |
RegenerationBL | -0.551 | 1.033 | 0.99999 | 1.00000 | |
RegenerationTP | -1.495 | 1.033 | 0.99989 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_10537 | 19 | 0.4 | Mlig455_007765 | Neo: - Age: - |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_007765 {REF} {Length: 4181} {Pfam: MULE transposase domain [PF10551.11, score=50.9]} {Smed: dd_Smed_v6_40199_0_1, dd_Smed_v6_40199_0_1, [Score=77.0, Expect=9e-17]} {RNA1509_40208} {RNA1310_21348.1, RNA1509_40208} {RNA1509_40208, RNA815_35855} | |
2. | MligTC455_12757 | 29 | 0.61 | Mlig455_036078 | Neo: - Age: Down-Down-Up |
1.832 | - | - | - | 0.875 | - | 0.957 | Mlig455_036078 {REF} {Length: 1242} {RNA1509_5640} {RNA1310_31330} {RNA815_4830.1} | |
3. | MligTC455_48478 | 222 | 4.63 | Mlig455_035468 | Neo: - Age: Down-Up-Down |
SYNPO2L | 1.797 | - | - | - | - | 0.846 | 0.951 | Mlig455_035468 {REF} {Length: 4132} {Pfam: PDZ domain [PF00595.26, score=34.4]; PDZ domain [PF17820.3, score=31.7]} {Human: ENSG00000166317, SYNPO2L, synaptopodin 2 like, [Score=62.8, Expect=5e-10]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [RH, Score=67.0, Expect=2e-11]} {Dmel: FBgn0039897, CG1674, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_8867_0_1, dd_Smed_v6_8867_0_1, [RH, Score=130, Expect=2e-33]} {RNA1509_27975, RNA1509_48856} {RNA1310_2698, RNA1509_27975, RNA1509_48856} {RNA1509_27975, RNA1509_48856, RNA815_2100} |
4. | MligTC455_29760 | 19 | 0.39 | Mlig455_013569 | Neo: - Age: - |
1.743 | - | - | - | - | 0.765 | 0.978 | Mlig455_013569 {REF} {Length: 2248} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35898} {RNA1310_38329} {RNA815_47127} | |
5. | MligTC455_24078 | 101 | 2.1 | Mlig455_034284 | Neo: - Age: - Region-enriched R7: 3.488/0.00547 |
1.706 | - | - | - | 0.751 | - | 0.955 | Mlig455_034284 {REF} {Length: 2673} {RNA1509_26571} {RNA1310_19226, RNA1509_26571} {RNA1509_26571, RNA815_5656.1} | |
6. | MligTC455_16714 | 46 | 0.96 | Mlig455_008572 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_008572 {REF} {Length: 1318} {NoTransDecoderORF} {RNA1310_58306} | |
7. | MligTC455_25164 | 260 | 5.42 | Mlig455_052955 | Neo: Irradiation Age: - Region-specific R4: 4.920 Region-enriched R4: 3.625/0.00000 |
0.973 | - | - | - | 0.973 | - | - | Mlig455_052955 {REF} {Length: 1592} {RNA1509_17583, RNA1509_36452} {RNA1310_44647, RNA1509_36452} {RNA1509_36452, RNA815_22309} | |
8. | MligTC455_51019 | 463 | 9.65 | Mlig455_006248, Mlig455_061193 | Neo: Germline Age: - Region-specific R4: 6.492 Region-enriched R4: 3.881/0.00032 |
0.971 | - | - | - | 0.971 | - | - | Mlig455_006248 {REF} {Length: 703} {RNA1509_43654} {RNA1310_54172.2} {RNA815_28160} Mlig455_061193 {REF} {Length: 725} {RNA1509_43654} {RNA1310_54172.2, RNA1509_43654} {RNA1509_43654, RNA815_28160} |
|
9. | MligTC455_19576 | 13 | 0.28 | Mlig455_052862 | Neo: - Age: - |
TXNRD2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_052862 {REF} {Length: 3514} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=168.4]; LCCL domain [PF03815.21, score=76.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=72.7]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.4]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.0]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=27.2]; FAD binding domain [PF00890.26, score=22.5]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=22.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.7]; HI0933-like protein [PF03486.16, score=18.5]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=3e-133]} {Mouse: ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=454, Expect=9e-151]; ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=454, Expect=9e-151]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=422, Expect=8e-139]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=382, Expect=2e-123]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=429, Expect=1e-141]} {RNA1509_26325} {RNA1310_14820} {RNA815_14934} |
10. | MligTC455_37191 | 312 | 6.49 | Mlig455_065140 | Neo: Germline Age: - Region-specific R4: 4.875 Region-enriched R4: 2.686/0.00281 |
0.966 | - | - | - | 0.966 | - | - | Mlig455_065140 {REF} {Length: 935} {Pfam: WSC domain [PF01822.21, score=42.5]} {RNA1509_13402, RNA1509_21327, RNA1509_3408, RNA1509_46959, RNA1509_47613} {RNA1310_46479, RNA1509_13402, RNA1509_21327, RNA1509_3408, RNA1509_46959, RNA1509_47613} {RNA1509_13402, RNA1509_21327, RNA1509_3408, RNA1509_46959, RNA1509_47613, RNA815_20066.1} | |
11. | MligTC455_28939 | 158 | 3.3 | Mlig455_051092 | Neo: Germline Age: - Region-specific R4: 6.221 Region-enriched R4: 4.354/0.00000 |
0.962 | - | - | - | 0.962 | - | - | Mlig455_051092 {REF} {Length: 3433} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=62.9]} {RNA1509_17512} {RNA1310_14948} {RNA815_4608.1} | |
12. | MligTC455_33180 | 755 | 15.73 | Mlig455_041639 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.208 Region-enriched R4: 2.490/0.00006 Regeneration-downregulated R4: -2.637 Regeneration-depleted R4: -2.637 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_041639 {REF} {Length: 2080} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=59.7, Expect=1e-10]} {RNA1509_11313, RNA1509_2286, RNA1509_2706} {RNA1310_28847, RNA1509_11313, RNA1509_2286, RNA1509_2706} {RNA1509_11313, RNA1509_2286, RNA1509_2706, RNA815_12983} | |
13. | MligTC455_35249 | 23 | 0.48 | Mlig455_044836 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_044836 {REF} {Length: 1594} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_64063.1, RNA1509_50710} {RNA1509_50710, RNA815_12678.2} | |
14. | MligTC455_35332 | 50 | 1.04 | Mlig455_048988, Mlig455_049005 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 4.774/0.02342 |
RPS6KB1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_048988 {REF} {Length: 2772} {Pfam: Protein kinase domain [PF00069.27, score=232.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.2]; Protein kinase C terminal domain [PF00433.26, score=35.1]; Kinase-like [PF14531.8, score=30.7]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [Score=451, Expect=2e-154]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [Score=442, Expect=8e-151]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=449, Expect=2e-153]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=7e-147]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=7e-147]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [Score=434, Expect=4e-148]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=425, Expect=8e-144]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=465, Expect=3e-160]} {RNA1509_36368} {RNA1310_14771.1} {RNA815_3550} Mlig455_049005 {REF} {Length: 2748} {Pfam: Protein kinase domain [PF00069.27, score=217.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.2]; Protein kinase C terminal domain [PF00433.26, score=35.3]; Kinase-like [PF14531.8, score=22.8]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [Score=406, Expect=2e-137]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [Score=403, Expect=5e-136]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=406, Expect=1e-136]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=399, Expect=1e-134]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=399, Expect=1e-134]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [Score=394, Expect=1e-132]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=380, Expect=2e-126]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [Score=437, Expect=2e-149]} {RNA1509_36368} {RNA1310_28996.2} {RNA815_3550} |
15. | MligTC455_19794 | 443 | 9.24 | Mlig455_011245, Mlig455_011322 | Neo: Germline Age: Up-Down-Down Region-specific R4: 6.709 Region-enriched R4: 3.213/0.00017 |
0.959 | - | - | - | 0.959 | - | - | Mlig455_011245 {REF} {Length: 2060} {RNA1509_4608} {RNA1310_13338.1, RNA1509_4608} {RNA1509_4608, RNA815_8234} Mlig455_011322 {REF} {Length: 2023} {RNA1509_25568, RNA1509_4608} {RNA1310_13338.1, RNA1509_25568} {RNA1509_25568, RNA815_8234} |
|
16. | MligTC455_10832 | 474 | 9.87 | Mlig455_067113 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.184 Region-enriched R4: 3.425/0.00029 Regeneration-downregulated R3: -5.576 Regeneration-depleted R3: -5.576 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_067113 {REF} {Length: 1026} {RNA1509_11529, RNA1509_14609, RNA1509_51426} {RNA1310_30098.1, RNA1509_11529, RNA1509_51426} {RNA1509_11529, RNA1509_51426, RNA815_20285.1} | |
17. | MligTC455_11145 | 126 | 2.62 | Mlig455_059502 | Neo: Germline Age: - Region-enriched R4: 4.489/0.00599 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_059502 {REF} {Length: 843} {RNA1509_33755, RNA1509_47692} {RNA1310_43967.2, RNA1509_33755, RNA1509_47692} {RNA1509_33755, RNA1509_47692, RNA815_13783} | |
18. | MligTC455_13987 | 20 | 0.42 | Mlig455_025645 | Neo: - Age: - |
IRX5 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_025645 {REF} {Length: 2320} {Pfam: Homeobox KN domain [PF05920.13, score=56.2]; Homeodomain [PF00046.31, score=31.8]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=139, Expect=6e-37]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=135, Expect=5e-36]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=136, Expect=6e-36]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=135, Expect=8e-36]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=130, Expect=6e-34]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=130, Expect=9e-34]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=130, Expect=4e-34]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=130, Expect=1e-33]} {Dmel: FBgn0015904, ara, araucan, [Score=133, Expect=2e-34]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=111, Expect=7e-28]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=148, Expect=2e-41]} {RNA1310_51494.1} {RNA815_48813} |
19. | MligTC455_51620 | 354 | 7.38 | Mlig455_044476 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 6.413 Region-enriched R4: 4.476/0.00000 Regeneration-downregulated R4: -2.322 Regeneration-depleted R4: -2.322 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_044476 {REF} {Length: 1085} {RNA1509_37356} {RNA1310_34145} {RNA815_15838} | |
20. | MligTC455_01801 | 17 | 0.36 | Mlig455_032460 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_032460 {REF} {Length: 197} {NoTransDecoderORF} {RNA1310_39046} {RNA815_41302} | |
21. | MligTC455_09574 | 380 | 7.92 | Mlig455_056381 | Neo: Germline Age: Up-Down-Down Region-specific R4: 4.904 Region-enriched R4: 2.979/0.00014 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_056381 {REF} {Length: 2365} {Pfam: Erythromycin esterase [PF05139.16, score=19.2]} {RNA1509_38382} {RNA1310_19619.1} {RNA815_8160.1} | |
22. | MligTC455_18904 | 1153 | 24.01 | Mlig455_059216 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.491 Region-enriched R4: 3.942/0.00000 Regeneration-depleted TP: -7.245 |
DNAJB6 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_059216 {REF} {Length: 1595} {Pfam: DnaJ domain [PF00226.33, score=71.8]} {Human: ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [Score=71.6, Expect=1e-13]; ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=70.1, Expect=1e-13]} {Mouse: ENSMUSG00000081984, Dnajb3, DnaJ heat shock protein family (Hsp40) member B3, [Score=72.0, Expect=2e-14]; ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=71.2, Expect=3e-14]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=69.3, Expect=4e-13]} {Dmel: FBgn0034091, mrj, [Score=72.8, Expect=1e-14]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=64.7, Expect=8e-12]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=68.9, Expect=9e-14]} {RNA1509_2894} {RNA1310_1000, RNA1509_2894} {RNA1509_2894, RNA815_1521} |
23. | MligTC455_16020 | 273 | 5.69 | Mlig455_052333 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.890 Region-enriched R3: 4.114/0.00000 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_052333 {REF} {Length: 1687} {Pfam: RING-type zinc-finger [PF13445.8, score=22.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.2]} {RNA1509_36870} {RNA1310_20406} {RNA815_6394} | |
24. | MligTC455_18469 | 533 | 11.11 | Mlig455_070391 | Neo: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_070391 {REF} {Length: 1452} {Pfam: Lipase (class 3) [PF01764.27, score=96.6]} {Celegans: WBGene00022457, Y110A7A.7, [Score=157, Expect=1e-44]} {RNA1509_36256, RNA1509_36380} {RNA1310_22408, RNA1509_36380} {RNA1509_36380, RNA815_9975} | |
25. | MligTC455_32000 | 89 | 1.84 | Mlig455_065403 | Neo: Germline Age: Down-Down-Up Region-enriched R4: 4.171/0.00009 |
FKRP | 0.95 | - | - | - | 0.950 | - | - | Mlig455_065403 {REF} {Length: 4520} {Pfam: LicD family [PF04991.15, score=59.9]} {Human: ENSG00000181027, FKRP, fukutin related protein, [Score=48.1, Expect=1e-05]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_22064_0_1, dd_Smed_v6_22064_0_1, [Score=103, Expect=3e-25]} {RNA1509_48974} {RNA1310_21292} {RNA815_8600.1} |
26. | MligTC455_41948 | 9 | 0.2 | Mlig455_066265 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_066265 {REF} {Length: 3186} {Pfam: PT repeat [PF04886.14, score=39.9]} {Celegans: WBGene00004996, spp-11, Saposin-like protein 11, [Score=43.1, Expect=1e-05]} {RNA1509_19424} {RNA1310_24137} {RNA815_5110.1} |