Data search


search
Exact
Search

Results for MligTC455_35249

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35249 23 0.48 Mlig455_044836

Neo: -

Age: -

Mlig455_044836 {REF} {Length: 1594} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_64063.1, RNA1509_50710} {RNA1509_50710, RNA815_12678.2}

Cumulative graph for MligTC455_35249

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2 0.836 0.99963 1.00000
RegionR2 2.875 0.836 0.99985 1.00000
RegionR3 -0.189 0.836 0.99992 1.00000
RegionR4 -2.93 0.836 0.99965 1.00000
RegionR5 -1.371 0.836 0.99982 1.00000
RegionR6 -0.217 0.836 0.99993 1.00000
RegionR7 1.649 0.836 0.99994 1.00000
RegionR8 2.184 0.836 0.99991 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.005 0.836 0.99990 1.00000
RegenerationR2 2.605 0.836 0.01678 0.21224
RegenerationR3 4.572 0.836 0.01328 0.21264
RegenerationR4 3.079 0.836 0.02958 0.27711
RegenerationR5 4.678 0.836 0.00487 0.12655
RegenerationR6 3.335 0.836 0.02732 0.20678
RegenerationBL -1.203 0.836 0.99986 1.00000
RegenerationTP -0.533 0.836 0.99988 1.00000


Genes with expression patterns similar to MligTC455_35249

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35249 23 0.48 Mlig455_044836

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_044836 {REF} {Length: 1594} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_64063.1, RNA1509_50710} {RNA1509_50710, RNA815_12678.2}
2. MligTC455_29619 12 0.25 Mlig455_044194

Neo: -

Age: -

1.698 - - - - 0.707 0.991 Mlig455_044194 {REF} {Length: 6662} {RNA1509_50100} {RNA1310_20046.1} {RNA815_28999}
3. MligTC455_39578 62 1.3 Mlig455_062612

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.532

Region-enriched R2: 5.707/0.01250

0.983 - - - - - 0.983 Mlig455_062612 {REF} {Length: 2100} {Pfam: Domain of unknown function (DUF19) [PF01579.20, score=18.7]} {RNA1509_45897} {RNA1310_21458, RNA1509_45897} {RNA1509_45897, RNA815_13754}
4. MligTC455_36824 13 0.27 Mlig455_013106

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.555

HSPB6 0.981 - - - - - 0.981 Mlig455_013106 {REF} {Length: 4507} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=48.8]} {Human: ENSG00000004776, HSPB6, heat shock protein family B (small) member 6, [RH, Score=55.1, Expect=4e-08]} {Mouse: ENSMUSG00000036854, Hspb6, heat shock protein, alpha-crystallin-related, B6, [RH, Score=58.2, Expect=2e-09]} {Dmel: FBgn0261649, tinc, tincar, [RH, Score=98.6, Expect=2e-20]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=134, Expect=6e-32]} {RNA1509_42227} {RNA1310_6823.1} {RNA815_9589}
5. MligTC455_04693 18 0.37 Mlig455_031913

Neo: -

Age: -

0.969 - - - - - 0.969 Mlig455_031913 {REF} {Length: 1676} {NoTransDecoderORF} {RNA1509_7715} {RNA1310_17276.1} {RNA815_2054.1}
6. MligTC455_09353 21 0.44 Mlig455_024297

Neo: -

Age: -

0.969 - - - - - 0.969 Mlig455_024297 {REF} {Length: 300} {NoTransDecoderORF} {RNA1509_27479} {RNA1310_122321}
7. MligTC455_13588 43 0.9 Mlig455_070234

Neo: -

Age: -

0.968 - - - - - 0.968 Mlig455_070234 {REF} {Length: 857} {Pfam: Tup N-terminal [PF08581.12, score=24.8]} {RNA1310_118445}
8. MligTC455_11174 35 0.73 Mlig455_044360

Neo: -

Age: -

ARFIP2 0.965 - - - - 0.965 - Mlig455_044360 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: Arfaptin-like domain [PF06456.15, score=205.5]} {Human: ENSG00000132254, ARFIP2, ADP ribosylation factor interacting protein 2, [RH, Score=270, Expect=3e-88]; ENSG00000164144, ARFIP1, ADP ribosylation factor interacting protein 1, [RH, Score=268, Expect=5e-87]} {Mouse: ENSMUSG00000030881, Arfip2, ADP-ribosylation factor interacting protein 2, [RH, Score=269, Expect=5e-88]; ENSMUSG00000074513, Arfip1, ADP-ribosylation factor interacting protein 1, [RH, Score=265, Expect=6e-86]; ENSMUSG00000102805, Gm37240, predicted gene, 37240, [RH, Score=262, Expect=1e-86]} {Dmel: FBgn0037884, Arfip, Arfaptin, [RH, Score=262, Expect=3e-85]} {Celegans: WBGene00010040, F54C8.7, [RH, Score=137, Expect=6e-38]} {Smed: dd_Smed_v6_5732_0_1, dd_Smed_v6_5732_0_1, [RH, Score=234, Expect=2e-75]} {RNA1509_22952} {RNA1310_13386} {RNA815_7638}
9. MligTC455_31793 17 0.36 Mlig455_026274

Neo: -

Age: Up-Down-Up

Region-enriched R4: 5.540/0.02199

TRIM3 0.965 - - - - - 0.965 Mlig455_026274 {REF} {Length: 2070} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=28.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=62.0, Expect=2e-09]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=62.0, Expect=1e-09]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=62.0, Expect=1e-09]} {Dmel: FBgn0265356, tn, thin, [Score=57.4, Expect=3e-08]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.5}
10. MligTC455_10537 19 0.4 Mlig455_007765

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_007765 {REF} {Length: 4181} {Pfam: MULE transposase domain [PF10551.11, score=50.9]} {Smed: dd_Smed_v6_40199_0_1, dd_Smed_v6_40199_0_1, [Score=77.0, Expect=9e-17]} {RNA1509_40208} {RNA1310_21348.1, RNA1509_40208} {RNA1509_40208, RNA815_35855}
11. MligTC455_07434 11 0.23 Mlig455_000460

Neo: -

Age: -

0.958 - - - - - 0.958 Mlig455_000460 {REF} {Length: 396} {NoTransDecoderORF}
12. MligTC455_19633 19 0.41 Mlig455_016139

Neo: -

Age: -

0.954 - - - - - 0.954 Mlig455_016139 {REF} {Length: 1725} {RNA1509_45988} {RNA1310_31071.1, RNA1509_45988} {RNA1509_45988, RNA815_44017}
13. MligTC455_16714 46 0.96 Mlig455_008572

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_008572 {REF} {Length: 1318} {NoTransDecoderORF} {RNA1310_58306}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA