TomoSeq data search

Data search

Results for MligTC455_10700

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10700	41	0.85	Mlig455_006317	Neo: - Age: -		Mlig455_006317 {REF} {Length: 1029} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_10700

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.335	1.137	1.00000	1.00000
RegionR2	1.837	1.137	0.33174	0.72353
RegionR3	2.271	1.137	0.25556	0.79977
RegionR4	1.218	1.137	0.40075	0.72725
RegionR5	1.912	1.137	0.31476	0.65480
RegionR6	2.231	1.137	0.19372	0.76106
RegionR7	-1.668	1.137	1.00000	1.00000
RegionR8	-3.466	1.137	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.671	1.137	0.99996	1.00000
RegenerationR2	0.541	1.137	0.63579	0.92984
RegenerationR3	0.236	1.137	0.76066	0.96788
RegenerationR4	1.171	1.137	0.30807	0.74895
RegenerationR5	1.329	1.137	0.23000	0.66435
RegenerationR6	1.455	1.137	0.23449	0.58203
RegenerationBL	4.121	1.137	0.04316	0.23698
RegenerationTP	3.145	1.137	0.27526	0.72301

Genes with expression patterns similar to MligTC455_10700

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10700	41	0.85	Mlig455_006317	Neo: - Age: -	2	-	-	-	1.000	1.000	-	Mlig455_006317 {REF} {Length: 1029} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}
2.	MligTC455_10701	47	0.97	Mlig455_011740	Neo: - Age: -	0.988	-	-	-	0.988	-	-	Mlig455_011740 {REF} {Length: 4438} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; Integrase zinc binding domain [PF17921.3, score=57.0]; Integrase core domain [PF00665.28, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.8]; Aspartyl protease [PF13650.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=20.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=3e-75]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
3.	MligTC455_39614	347	7.22	Mlig455_060077	Neo: - Age: -	0.951	-	-	-	-	0.951	-	Mlig455_060077 {REF} {Length: 243} {RNA1509_44026} {RNA1310_29358} {RNA815_40687}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_10700

0.85

Mlig455_006317

Neo: -

Age: -

1.000

Mlig455_006317 {REF} {Length: 1029} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

MligTC455_10701

0.97

Mlig455_011740

Neo: -

Age: -

0.988

Mlig455_011740 {REF} {Length: 4438} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; Integrase zinc binding domain [PF17921.3, score=57.0]; Integrase core domain [PF00665.28, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.8]; Aspartyl protease [PF13650.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=20.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=3e-75]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}

MligTC455_39614

347

7.22

Mlig455_060077

Neo: -

Age: -

0.951

Mlig455_060077 {REF} {Length: 243} {RNA1509_44026} {RNA1310_29358} {RNA815_40687}