M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_10701

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10701 47 0.97 Mlig455_011740

Neo: -

Age: -

 Mlig455_011740 {REF} {Length: 4438} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; Integrase zinc binding domain [PF17921.3, score=57.0]; Integrase core domain [PF00665.28, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.8]; Aspartyl protease [PF13650.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=20.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=3e-75]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}

Cumulative graph for MligTC455_10701

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.48 1.197 0.99983 1.00000
RegionR2 2.207 1.197 0.99994 1.00000
RegionR3 2.308 1.197 0.99992 1.00000
RegionR4 -0.335 1.197 0.99990 1.00000
RegionR5 1.839 1.197 0.99993 1.00000
RegionR6 1.603 1.197 0.99996 1.00000
RegionR7 0.498 1.197 0.99996 1.00000
RegionR8 -2.639 1.197 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.431 1.197 1.00000 1.00000
RegenerationR2 4.316 1.197 0.00213 0.06992
RegenerationR3 3.421 1.197 0.05552 0.40441
RegenerationR4 4.246 1.197 0.00614 0.11238
RegenerationR5 3.402 1.197 0.01527 0.21499
RegenerationR6 4.145 1.197 0.02251 0.18638
RegenerationBL 5.371 1.197 0.01162 0.10988
RegenerationTP 3.95 1.197 0.19088 0.62970


Genes with expression patterns similar to MligTC455_10701

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10701 47 0.97 Mlig455_011740

Neo: -

Age: -

 2 - - - 1.000 1.000 - Mlig455_011740 {REF} {Length: 4438} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; Integrase zinc binding domain [PF17921.3, score=57.0]; Integrase core domain [PF00665.28, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.8]; Aspartyl protease [PF13650.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=20.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=3e-75]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
2. MligTC455_49533 178 3.71 Mlig455_039575, Mlig455_039589

Neo: -

Age: -

Region-enriched R2: 3.871/0.04295

 MOV10L1 1.76 - - - 0.798 0.962 -

Mlig455_039575 {REF} {Length: 4060} {TRANSSPLICED} {Pfam: AAA domain [PF13086.8, score=110.5]; AAA domain [PF13087.8, score=72.8]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=35.2]; Type III restriction enzyme, res subunit [PF04851.17, score=25.1]; AAA domain [PF13401.8, score=19.1]; UvrD/REP helicase N-terminal domain [PF00580.23, score=18.7]} {Human: ENSG00000073146, MOV10L1, Mov10 like RISC complex RNA helicase 1, [Score=386, Expect=5e-115]; ENSG00000155363, MOV10, Mov10 RISC complex RNA helicase, [Score=375, Expect=3e-113]} {Mouse: ENSMUSG00000015365, Mov10l1, Moloney leukemia virus 10-like 1, [Score=380, Expect=3e-113]; ENSMUSG00000002227, Mov10, Moloney leukemia virus 10, [Score=372, Expect=2e-111]} {Dmel: FBgn0041164, armi, armitage, [Score=377, Expect=6e-112]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=137, Expect=1e-32]} {Smed: dd_Smed_v6_2121_1_1, dd_Smed_v6_2121_1_1, [Score=543, Expect=7e-175]} {RNA1509_13793} {RNA1310_3451.1} {RNA815_11722}

Mlig455_039589 {REF} {Length: 4433} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=126.9]; AAA domain [PF13086.8, score=110.4]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=35.5]; Type III restriction enzyme, res subunit [PF04851.17, score=25.3]; AAA domain [PF13401.8, score=19.1]; UvrD/REP helicase N-terminal domain [PF00580.23, score=18.6]} {Human: ENSG00000073146, MOV10L1, Mov10 like RISC complex RNA helicase 1, [RH, Score=443, Expect=9e-136]; ENSG00000155363, MOV10, Mov10 RISC complex RNA helicase, [RH, Score=421, Expect=7e-130]} {Mouse: ENSMUSG00000015365, Mov10l1, Moloney leukemia virus 10-like 1, [RH, Score=436, Expect=2e-133]; ENSMUSG00000002227, Mov10, Moloney leukemia virus 10, [RH, Score=417, Expect=3e-128]} {Dmel: FBgn0041164, armi, armitage, [RH, Score=418, Expect=4e-127]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=165, Expect=4e-41]} {Smed: dd_Smed_v6_2121_1_1, dd_Smed_v6_2121_1_1, [RH, Score=583, Expect=0.0]} {RNA1509_13793} {RNA1310_3451.1} {RNA815_11722}
3. MligTC455_10700 41 0.85 Mlig455_006317

Neo: -

Age: -

 0.988 - - - 0.988 - - Mlig455_006317 {REF} {Length: 1029} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}
4. MligTC455_54125 957 19.94 Mlig455_000017

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.528/0.00489

 SPEF1 0.975 - - - - 0.975 - Mlig455_000017 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: CH-like domain in sperm protein [PF06294.13, score=114.7]; CAMSAP CH domain [PF11971.10, score=53.6]} {Human: ENSG00000101222, SPEF1, sperm flagellar 1, [RH, Score=172, Expect=1e-52]} {Mouse: ENSMUSG00000027329, Spef1, sperm flagellar 1, [RH, Score=180, Expect=3e-56]} {Dmel: FBgn0030722, CG12395, [Score=65.5, Expect=2e-12]} {Smed: dd_Smed_v6_5648_0_1, dd_Smed_v6_5648_0_1, [RH, Score=272, Expect=5e-93]} {RNA1509_17511, RNA1509_37707, RNA1509_9365} {RNA1310_25346.1, RNA1509_17511, RNA1509_37707, RNA1509_9365} {RNA1509_17511, RNA1509_37707, RNA1509_9365, RNA815_11607}
5. MligTC455_32737 100 2.08 Mlig455_024781, Mlig455_053522

Neo: -

Age: Up-Down-Down

 NYNRIN 0.974 - - - - 0.974 -

Mlig455_024781 {REF} {Length: 6075} {Pfam: Integrase core domain [PF00665.28, score=47.6]; Integrase core domain [PF13683.8, score=22.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=50.1, Expect=9e-06]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=59.3, Expect=5e-11]} {RNA1509_9393} {RNA1310_740.1} {RNA815_163.1}

Mlig455_053522 {REF} {Length: 941} {Pfam: Integrase core domain [PF00665.28, score=47.7]} {RNA1310_30681} {RNA815_55649}
6. MligTC455_09830 66 1.37 Mlig455_040902

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_040902 {REF} {Length: 1141} {RNA1310_66500} {RNA815_46507}
7. MligTC455_31068 152 3.16 Mlig455_041420

Neo: -

Age: -

 MAN2C1 0.971 - - - - 0.971 - Mlig455_041420 {REF} {Length: 5198} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=253.1]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=96.5]; Alpha mannosidase middle domain [PF09261.13, score=67.9]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [Score=567, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [Score=555, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [Score=683, Expect=0.0]} {RNA1509_13703, RNA1509_54285} {RNA1310_2504.1, RNA1509_54285} {RNA1509_54285, RNA815_715}
8. MligTC455_22582 361 7.53 Mlig455_003201

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_003201 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=97.6]} {Smed: dd_Smed_v6_3388_0_1, dd_Smed_v6_3388_0_1, [RH, Score=111, Expect=2e-31]} {RNA1509_26264, RNA1509_38460, RNA1509_39840} {RNA1310_38517.1, RNA1509_26264, RNA1509_38460, RNA1509_39840} {RNA1509_26264, RNA1509_38460, RNA1509_39840, RNA815_12487}
9. MligTC455_52442 73 1.53 Mlig455_007385

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_007385 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1310_134979}
10. MligTC455_31864 159 3.31 Mlig455_060554, Mlig455_066902

Neo: -

Age: -

 0.969 - - - - 0.969 -

Mlig455_060554 {REF} {Length: 556} {NoTransDecoderORF} {RNA1310_90364}

Mlig455_066902 {REF} {Length: 4898} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=24.5]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_8149.1}
11. MligTC455_27638 969 20.19 Mlig455_022789

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.917

 CLUAP1 0.968 - - - - 0.968 - Mlig455_022789 {REF} {Length: 2458} {Pfam: Clusterin-associated protein-1 [PF10234.11, score=358.0]} {Human: ENSG00000103351, CLUAP1, clusterin associated protein 1, [RH, Score=332, Expect=1e-110]} {Mouse: ENSMUSG00000014232, Cluap1, clusterin associated protein 1, [RH, Score=330, Expect=8e-110]} {Dmel: FBgn0031196, CG17599, [RH, Score=135, Expect=1e-34]} {Celegans: WBGene00001119, dyf-3, Clusterin-associated protein 1 homolog, [RH, Score=215, Expect=1e-65]} {Smed: dd_Smed_v6_8287_0_1, dd_Smed_v6_8287_0_1, [RH, Score=333, Expect=2e-110]} {RNA1509_14292, RNA1509_25335} {RNA1310_15979, RNA1509_14292, RNA1509_25335} {RNA1509_14292, RNA1509_25335, RNA815_6417.1}
12. MligTC455_37386 1075 22.39 Mlig455_004178, Mlig455_041121, Mlig455_041175

Neo: -

Age: Down-Up-Up

 TRHR 0.968 - - - - 0.968 -

Mlig455_004178 {REF} {Length: 1426} {Smed: dd_Smed_v6_16261_0_1, dd_Smed_v6_16261_0_1, [Score=55.1, Expect=2e-09]} {RNA1509_14001} {RNA1310_23895.2, RNA1509_14001} {RNA1509_14001, RNA815_14474.1}

Mlig455_041121 {REF} {Length: 2021} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=46.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.9]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=64.7, Expect=1e-10]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=68.6, Expect=4e-12]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=64.3, Expect=8e-11]} {Celegans: WBGene00011765, frpr-17, FMRFamide Peptide Receptor family, [RH, Score=79.3, Expect=6e-16]} {Smed: dd_Smed_v6_37609_0_1, dd_Smed_v6_37609_0_1, [Score=145, Expect=5e-40]}

Mlig455_041175 {REF} {Length: 1447} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=52.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.3]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=68.6, Expect=5e-12]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=63.9, Expect=1e-10]} {Celegans: WBGene00011765, frpr-17, FMRFamide Peptide Receptor family, [RH, Score=79.3, Expect=6e-16]} {Smed: dd_Smed_v6_37609_0_1, dd_Smed_v6_37609_0_1, [Score=145, Expect=9e-40]}
13. MligTC455_40794 268 5.57 Mlig455_017617

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_017617 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=43.8]} {Dmel: FBgn0035983, CG4080, [Score=48.9, Expect=6e-06]} {RNA1509_39355} {RNA1310_22099.1} {RNA815_10655}
14. MligTC455_45557 629 13.1 Mlig455_015721

Neo: -

Age: -

Region-enriched R2: 1.212/0.04087

 DYNLT1 0.965 - - - - 0.965 - Mlig455_015721 {REF} {Length: 1742} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=89.2]} {Human: ENSG00000146425, DYNLT1, dynein light chain Tctex-type 1, [RH, Score=165, Expect=5e-49]} {Mouse: ENSMUSG00000092074, Dynlt1a, dynein light chain Tctex-type 1A, [RH, Score=161, Expect=8e-48]; ENSMUSG00000095677, Dynlt1f, dynein light chain Tctex-type 1F, [RH, Score=161, Expect=8e-48]; ENSMUSG00000000579, Dynlt1c, dynein light chain Tctex-type 1C, [RH, Score=161, Expect=8e-48]; ENSMUSG00000096255, Dynlt1b, dynein light chain Tctex-type 1B, [RH, Score=161, Expect=8e-48]} {Dmel: FBgn0024432, Dlc90F, Dynein light chain 90F, [Score=138, Expect=3e-39]} {Smed: dd_Smed_v6_1166_0_1, dd_Smed_v6_1166_0_1, [RH, Score=171, Expect=5e-52]} {RNA1509_42217} {RNA1310_25091} {RNA815_10285.1}
15. MligTC455_27608 262 5.45 Mlig455_031163

Neo: -

Age: Up-Down-Down

 ITPR1 0.962 - - - - 0.962 - Mlig455_031163 {REF} {Length: 9294} {Pfam: RIH domain [PF01365.23, score=106.4]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=82.5]; RyR and IP3R Homology associated [PF08454.13, score=71.4]; MIR domain [PF02815.21, score=49.4]; Ion transport protein [PF00520.33, score=29.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=231, Expect=1e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=227, Expect=2e-58]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=236, Expect=2e-61]; ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=226, Expect=1e-58]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=214, Expect=5e-55]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=181, Expect=8e-45]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1880, Expect=0.0]} {RNA1509_17046} {RNA1310_1857, RNA1509_17046} {RNA1509_17046, RNA815_770}
16. MligTC455_33512 1175 24.48 Mlig455_057379, Mlig455_057402

Neo: -

Age: -

Region-enriched R4: 2.938/0.00125

 0.962 - - - - 0.962 -

Mlig455_057379 {REF} {Length: 2204} {RNA1509_32988} {RNA1310_29363} {RNA815_15857.1}

Mlig455_057402 {REF} {Length: 2840} {RNA1509_32988} {RNA1310_29363, RNA1509_32988} {RNA1509_32988, RNA815_15857.1}
17. MligTC455_34852 681 14.19 Mlig455_040753, Mlig455_066786

Neo: -

Age: logFC(26M/2M)=-0.406

 CAPN3, CAPN9 0.962 - - - - 0.962 -

Mlig455_040753 {REF} {Length: 2907} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.3]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=31.5]; EF-hand domain pair [PF13833.8, score=24.3]; EF-hand domain [PF13405.8, score=23.5]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]; ENSG00000092529, CAPN3, calpain 3, [Score=540, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=534, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=525, Expect=1e-177]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=566, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=8e-143]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}

Mlig455_066786 {REF} {Length: 4477} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.2]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=32.0]; EF-hand domain pair [PF13833.8, score=23.4]; EF-hand domain [PF13405.8, score=23.2]; EF hand [PF13202.8, score=18.8]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=542, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=536, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=526, Expect=5e-178]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=565, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=2e-142]} {Smed: dd_Smed_v6_1752_0_2, dd_Smed_v6_1752_0_2, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}
18. MligTC455_38534 27 0.57 Mlig455_062669

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_062669 {REF} {Length: 1598} {NoTransDecoderORF} {RNA1509_46209} {RNA1310_8821} {RNA815_39896.2}
19. MligTC455_53093 333 6.93 Mlig455_002441

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.548/0.03843

 SOX2 0.96 - - - - 0.960 - Mlig455_002441 {REF} {Length: 2143} {Pfam: HMG (high mobility group) box [PF00505.21, score=94.8]; HMG-box domain [PF09011.12, score=43.0]; Protein of unknown function (DUF2722) [PF10846.10, score=21.2]; VIT family [PF01988.21, score=18.8]} {Human: ENSG00000181449, SOX2, SRY-box 2, [RH, Score=179, Expect=6e-54]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [RH, Score=179, Expect=4e-54]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=162, Expect=1e-44]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=169, Expect=7e-51]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=158, Expect=2e-44]} {RNA1509_11450} {RNA1310_8352} {RNA815_15989}
20. MligTC455_28108 147 3.07 Mlig455_049966, Mlig455_051247

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_049966 {REF} {Length: 1643} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_14078} {RNA815_15623}

Mlig455_051247 {REF} {Length: 862} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}
21. MligTC455_56420 35 0.72 Mlig455_064962

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_064962 {REF} {Length: 368} {RNA1509_38728} {RNA1310_9789} {RNA815_21216}
22. MligTC455_20850 1618 33.71 Mlig455_021473, Mlig455_067356

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.171

 MAF1 0.956 - - - - 0.956 -

Mlig455_021473 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_23418, RNA1509_44779} {RNA1310_20653.1, RNA1509_44779} {RNA1509_44779, RNA815_7842.1}

Mlig455_067356 {REF} {Length: 2464} {Pfam: Maf1 regulator [PF09174.12, score=163.9]} {Human: ENSG00000179632, MAF1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=148, Expect=9e-43]} {Mouse: ENSMUSG00000022553, Maf1, MAF1 homolog, negative regulator of RNA polymerase III, [RH, Score=145, Expect=8e-42]} {Dmel: FBgn0267861, Maf1, [RH, Score=156, Expect=1e-46]} {Celegans: WBGene00016622, mafr-1, Repressor of RNA polymerase III transcription MAF1, [RH, Score=100, Expect=4e-25]} {RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1310_20653.1, RNA1509_13113, RNA1509_23418, RNA1509_24039} {RNA1509_13113, RNA1509_23418, RNA1509_24039, RNA815_7842.1}
23. MligTC455_21470 491 10.23 Mlig455_028994

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.236

 KCNMA1 0.955 - - - - 0.955 - Mlig455_028994 {REF} {Length: 4059} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=82.1]; Ion channel [PF07885.18, score=48.7]; Ion transport protein [PF00520.33, score=31.6]; TrkA-N domain [PF02254.20, score=27.3]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=484, Expect=1e-151]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=482, Expect=5e-151]} {Dmel: FBgn0003429, slo, slowpoke, [Score=479, Expect=1e-150]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=461, Expect=5e-144]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=490, Expect=3e-155]} {RNA1509_10617} {RNA1310_2480.1} {RNA815_984.1}
24. MligTC455_27090 88 1.83 Mlig455_001328

Neo: Germline

Age: -

 0.955 - - - - 0.955 - Mlig455_001328 {REF} {Length: 2030} {RNA1509_10625} {RNA1310_32184} {RNA815_15395}
25. MligTC455_38766 185 3.86 Mlig455_001222, Mlig455_020644

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_001222 {REF} {Length: 6707} {RNA1509_31139} {RNA1310_616.2} {RNA815_26030.1}

Mlig455_020644 {REF} {Length: 434} {RNA1509_13878} {RNA1310_8770} {RNA815_18401}
26. MligTC455_49526 450 9.38 Mlig455_050949

Neo: -

Age: logFC(26M/2M)=-0.615

 CALM2 0.955 - - - - 0.955 - Mlig455_050949 {REF} {Length: 3680} {Pfam: EF-hand domain pair [PF13499.8, score=87.8]; EF hand [PF00036.34, score=79.8]; EF-hand domain [PF13405.8, score=67.4]; EF hand [PF13202.8, score=65.4]; EF-hand domain pair [PF13833.8, score=60.3]; EF-hand domain [PF08976.13, score=22.2]; EF-hand domain [PF14658.8, score=21.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=18.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=100, Expect=5e-24]; ENSG00000198668, CALM1, calmodulin 1, [Score=100, Expect=5e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=100, Expect=5e-24]; ENSG00000178363, CALML3, calmodulin like 3, [Score=99.4, Expect=8e-24]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=103, Expect=9e-25]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=102, Expect=4e-25]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=100, Expect=3e-24]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=100, Expect=3e-24]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=99.0, Expect=6e-24]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=102, Expect=4e-25]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=100, Expect=1e-24]} {RNA1509_48556} {RNA1310_10152.1} {RNA815_3673.1}
27. MligTC455_22412 271 5.65 Mlig455_057681, Mlig455_059990

Neo: -

Age: Down-Up-Up

 0.954 - - - - 0.954 -

Mlig455_057681 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534}

Mlig455_059990 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534}
28. MligTC455_16196 54 1.12 Mlig455_040106

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_040106 {REF} {Length: 857} {NoTransDecoderORF} {RNA1509_33264} {RNA1310_118043} {RNA815_55800}
29. MligTC455_33631 517 10.76 Mlig455_049914

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_049914 {REF} {Length: 852} {NoTransDecoderORF} {RNA1509_55678} {RNA1310_47811.1} {RNA815_24394.1}
30. MligTC455_47520 112 2.32 Mlig455_055872

Neo: -

Age: -

 TTLL4 0.953 - - - - 0.953 - Mlig455_055872 {REF} {Length: 5195} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=278.3]; YheC/D like ATP-grasp [PF14398.8, score=32.9]} {Human: ENSG00000135912, TTLL4, tubulin tyrosine ligase like 4, [Score=391, Expect=6e-118]} {Mouse: ENSMUSG00000033257, Ttll4, tubulin tyrosine ligase-like family, member 4, [Score=373, Expect=2e-111]} {Dmel: FBgn0026147, CG16833, [Score=343, Expect=1e-103]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=257, Expect=2e-74]} {Smed: dd_Smed_v6_17034_0_1, dd_Smed_v6_17034_0_1, [Score=431, Expect=2e-133]} {RNA1509_16750} {RNA1310_2257, RNA1509_16750} {RNA1509_16750, RNA815_2812}
31. MligTC455_09789 35 0.72 Mlig455_021741

Neo: -

Age: -

Regeneration-upregulated R2: 6.199

Regeneration-enriched R2: 6.199

 0.952 - - - - 0.952 - Mlig455_021741 {REF} {Length: 3253} {NoTransDecoderORF} {RNA1310_56463}
32. MligTC455_11575 13 0.28 Mlig455_045729

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_045729 {REF} {Length: 2698} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=39.4]} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}
33. MligTC455_38921 1688 35.17 Mlig455_023977

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.453

 MX2 0.952 - - - - 0.952 - Mlig455_023977 {REF} {Length: 3870} {Pfam: Dynamin central region [PF01031.22, score=175.3]; Dynamin family [PF00350.25, score=125.4]; Dynamin GTPase effector domain [PF02212.20, score=47.1]; 50S ribosome-binding GTPase [PF01926.25, score=22.3]; AAA ATPase domain [PF13191.8, score=19.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=319, Expect=2e-97]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=307, Expect=8e-94]} {Dmel: FBgn0003392, shi, shibire, [Score=181, Expect=2e-47]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=177, Expect=3e-46]} {Smed: dd_Smed_v6_2583_0_1, dd_Smed_v6_2583_0_1, [Score=194, Expect=3e-52]} {RNA1509_17985, RNA1509_34505, RNA1509_40252} {RNA1310_6542.1, RNA1509_17985, RNA1509_34505, RNA1509_40252} {RNA1509_17985, RNA1509_34505, RNA1509_40252, RNA815_1426.1}
34. MligTC455_47843 349 7.27 Mlig455_040270, Mlig455_040278

Neo: -

Age: -

 RPGRIP1L 0.952 - - - - 0.952 -

Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}

Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}
35. MligTC455_48955 294 6.13 Mlig455_034969

Neo: -

Age: Up-Down-Down

 AGRN 0.952 - - - - 0.952 - Mlig455_034969 {REF} {Length: 2190} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=130.2]; Kazal-type serine protease inhibitor domain [PF00050.23, score=96.2]} {Human: ENSG00000188157, AGRN, agrin, [Score=123, Expect=3e-29]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=126, Expect=2e-30]} {Dmel: FBgn0259878, Fs, Follistatin, [RH, Score=72.4, Expect=3e-13]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=143, Expect=2e-36]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [RH, Score=201, Expect=5e-56]} {RNA1509_15340} {RNA1310_13904.1} {RNA815_7896}
36. MligTC455_30278 29 0.6 Mlig455_044531

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_044531 {REF} {Length: 1227} {Pfam: Secretion system effector C (SseC) like family [PF04888.14, score=18.5]} {RNA1509_56489} {RNA1310_3442.1} {RNA815_3500.1}
37. MligTC455_03106 51 1.06 Mlig455_009919

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_009919 {REF} {Length: 513} {NoTransDecoderORF}
38. MligTC455_11173 11 0.23 Mlig455_016393

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_016393 {REF} {Length: 1000} {NoTransDecoderORF}
39. MligTC455_23703 308 6.41 Mlig455_000461

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.388

 NTAN1 0.95 - - - - 0.950 - Mlig455_000461 {REF} {Length: 2576} {TRANSSPLICED} {Pfam: Protein N-terminal asparagine amidohydrolase [PF14736.8, score=199.5]} {Human: ENSG00000157045, NTAN1, N-terminal asparagine amidase, [RH, Score=148, Expect=1e-41]; ENSG00000275779, NTAN1, N-terminal asparagine amidase, [RH, Score=148, Expect=1e-41]} {Mouse: ENSMUSG00000022681, Ntan1, N-terminal Asn amidase, [Score=139, Expect=2e-38]} {Dmel: FBgn0034371, SP2637, [RH, Score=142, Expect=9e-40]} {Smed: dd_Smed_v6_10581_0_1, dd_Smed_v6_10581_0_1, [RH, Score=128, Expect=2e-34]} {RNA1509_26314} {RNA1310_28360, RNA1509_26314} {RNA1509_26314, RNA815_16333}
40. MligTC455_27609 231 4.8 Mlig455_031171

Neo: -

Age: Up-Down-Down

 RYR2 0.95 - - - - 0.950 - Mlig455_031171 {REF} {Length: 1840} {Human: ENSG00000198626, RYR2, ryanodine receptor 2, [Score=57.0, Expect=9e-10]; ENSG00000198838, RYR3, ryanodine receptor 3, [Score=55.8, Expect=2e-09]; ENSG00000196218, RYR1, ryanodine receptor 1, [Score=55.1, Expect=4e-09]} {Mouse: ENSMUSG00000021313, Ryr2, ryanodine receptor 2, cardiac, [Score=57.0, Expect=6e-10]; ENSMUSG00000057378, Ryr3, ryanodine receptor 3, [Score=56.2, Expect=1e-09]; ENSMUSG00000030592, Ryr1, ryanodine receptor 1, skeletal muscle, [Score=55.1, Expect=3e-09]} {Dmel: FBgn0011286, RyR, Ryanodine receptor, [Score=52.8, Expect=1e-08]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=99.4, Expect=4e-25]} {RNA1509_17046} {RNA1310_1857} {RNA815_62.1}
41. MligTC455_34563 86 1.79 Mlig455_020138

Neo: -

Age: Down-Up-Down

 VASH2 0.95 - - - - 0.950 - Mlig455_020138 {REF} {Length: 2429} {Pfam: Vasohibin [PF14822.8, score=316.4]} {Human: ENSG00000143494, VASH2, vasohibin 2, [RH, Score=253, Expect=1e-81]; ENSG00000071246, VASH1, vasohibin 1, [RH, Score=252, Expect=2e-81]} {Mouse: ENSMUSG00000021256, Vash1, vasohibin 1, [RH, Score=255, Expect=2e-82]; ENSMUSG00000037568, Vash2, vasohibin 2, [RH, Score=252, Expect=2e-81]} {Smed: dd_Smed_v6_12833_0_1, dd_Smed_v6_12833_0_1, [RH, Score=230, Expect=1e-73]} {RNA1509_59274} {RNA1310_23626.1, RNA1509_59274} {RNA1509_59274, RNA815_11698.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA