Data search
Results for MligTC455_10711
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10711 | 32 | 0.67 | Mlig455_001819, Mlig455_001825, Mlig455_001826 | Neo: - Age: - Region-enriched R4: 5.120/0.01016 |
RTL1 | Mlig455_001819 {REF} {Length: 3698} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187} Mlig455_001825 {REF} {Length: 350} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]} {RNA1509_18694} {RNA1310_109.1} {RNA815_187} Mlig455_001826 {REF} {Length: 1568} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187} |
Cumulative graph for MligTC455_10711
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.389 | 1.129 | 0.99978 | 1.00000 | |
| RegionR2 | -2.15 | 1.129 | 0.85945 | 1.00000 | |
| RegionR3 | 0.945 | 1.129 | 0.37381 | 0.90776 | |
| RegionR4 | 5.12 | 1.129 | 0.00097 | 0.01016 | |
| RegionR5 | 0.34 | 1.129 | 0.99975 | 1.00000 | |
| RegionR6 | -1.511 | 1.129 | 0.99975 | 1.00000 | |
| RegionR7 | -1.399 | 1.129 | 0.99980 | 1.00000 | |
| RegionR8 | 0.044 | 1.129 | 0.99977 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.342 | 1.129 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.304 | 1.129 | 0.78887 | 0.98601 | |
| RegenerationR3 | -0.208 | 1.129 | 0.99033 | 1.00000 | |
| RegenerationR4 | -0.989 | 1.129 | 0.40229 | 0.81480 | |
| RegenerationR5 | 2.22 | 1.129 | 0.09492 | 0.47195 | |
| RegenerationR6 | 3.342 | 1.129 | 0.08602 | 0.36714 | |
| RegenerationBL | 3.051 | 1.129 | 0.13619 | 0.43980 | |
| RegenerationTP | 2.348 | 1.129 | 0.41060 | 0.83733 |
Genes with expression patterns similar to MligTC455_10711
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10711 | 32 | 0.67 | Mlig455_001819, Mlig455_001825, Mlig455_001826 | Neo: - Age: - Region-enriched R4: 5.120/0.01016 |
RTL1 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001819 {REF} {Length: 3698} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187} Mlig455_001825 {REF} {Length: 350} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]} {RNA1509_18694} {RNA1310_109.1} {RNA815_187} Mlig455_001826 {REF} {Length: 1568} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; Integrase core domain [PF00665.28, score=50.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.3]; Integrase zinc binding domain [PF17921.3, score=35.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=83.2, Expect=1e-15]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=207, Expect=1e-54]} {RNA1509_3053} {RNA1310_109.1} {RNA815_187} |
| 2. | MligTC455_10117 | 32 | 0.66 | Mlig455_038309 | Neo: - Age: - |
1.754 | - | - | 0.969 | - | - | 0.785 | Mlig455_038309 {REF} {Length: 362} {NoTransDecoderORF} {RNA1509_50858} {RNA1310_46223} {RNA815_38435} | |
| 3. | MligTC455_06495 | 43 | 0.9 | Mlig455_010655, Mlig455_070273 | Neo: - Age: Down-Down-Up |
0.996 | - | - | 0.996 | - | - | - | Mlig455_010655 {REF} {Length: 1719} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.5]; Integrase core domain [PF00665.28, score=52.1]; Integrase core domain [PF13683.8, score=20.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=60.1, Expect=5e-09]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=129, Expect=2e-33]} {RNA1509_40241, RNA1509_40440} {RNA1310_33355, RNA1509_40440} {RNA1509_40440, RNA815_16066} Mlig455_070273 {REF} {Length: 1515} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.9]; Integrase core domain [PF00665.28, score=49.7]; Integrase core domain [PF13683.8, score=19.1]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=128, Expect=5e-33]} {RNA1509_40241} {RNA1310_33355} {RNA815_16066} |
|
| 4. | MligTC455_13470 | 32 | 0.67 | Mlig455_063385 | Neo: - Age: - |
0.994 | - | - | 0.994 | - | - | - | Mlig455_063385 {REF} {Length: 558} {NoTransDecoderORF} {RNA1310_103865} | |
| 5. | MligTC455_31558 | 61 | 1.26 | Mlig455_029249, Mlig455_048836, Mlig455_050353 | Neo: - Age: - |
0.993 | - | - | 0.993 | - | - | - | Mlig455_029249 {REF} {Length: 1494} {NoTransDecoderORF} {RNA1509_17564} {RNA1310_32764} {RNA815_47530.2} Mlig455_048836 {REF} {Length: 1672} {NoTransDecoderORF} {RNA1509_28242} {RNA1310_32764} {RNA815_11419.1} Mlig455_050353 {REF} {Length: 890} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17564} {RNA1310_32764} {RNA815_11419.1} |
|
| 6. | MligTC455_28762 | 19 | 0.39 | Mlig455_041370 | Neo: - Age: - Region-enriched R4: 7.422/0.00037 |
STX1A | 0.977 | - | - | 0.977 | - | - | - | Mlig455_041370 {REF} {Length: 8366} {Pfam: Syntaxin [PF00804.27, score=198.6]; Pao retrotransposon peptidase [PF05380.15, score=167.0]; Protein of unknown function (DUF1759) [PF03564.17, score=123.2]; Putative peptidase (DUF1758) [PF05585.14, score=65.1]; SNARE domain [PF05739.21, score=63.6]; Family of unknown function (DUF5641) [PF18701.3, score=55.7]; Syntaxin-like protein [PF14523.8, score=28.3]; Aspartyl protease [PF13650.8, score=24.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.7]} {Human: ENSG00000106089, STX1A, syntaxin 1A, [RH, Score=358, Expect=7e-112]; ENSG00000099365, STX1B, syntaxin 1B, [RH, Score=351, Expect=3e-109]} {Mouse: ENSMUSG00000030806, Stx1b, syntaxin 1B, [RH, Score=351, Expect=2e-109]; ENSMUSG00000007207, Stx1a, syntaxin 1A (brain), [RH, Score=348, Expect=1e-108]} {Dmel: FBgn0013343, Syx1A, Syntaxin 1A, [RH, Score=358, Expect=7e-112]} {Celegans: WBGene00006798, unc-64, Syntaxin-1A homolog, [RH, Score=349, Expect=5e-109]} {Smed: dd_Smed_v6_8453_0_2, dd_Smed_v6_8453_0_2, [RH, Score=400, Expect=7e-127]} {RNA1509_13580} {RNA1310_373} {RNA815_2300} |
| 7. | MligTC455_26140 | 53 | 1.11 | Mlig455_009901, Mlig455_009903 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 4.764/0.00706 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_009901 {REF} {Length: 1856} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=129, Expect=1e-34]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2} Mlig455_009903 {REF} {Length: 1723} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=58.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.0]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=9e-35]} {RNA1509_29382} {RNA1310_7201} {RNA815_5886.2} |
|
| 8. | MligTC455_54091 | 78 | 1.63 | Mlig455_014997 | Neo: - Age: Down-Up-Up |
RPE | 0.956 | - | - | - | 0.956 | - | - | Mlig455_014997 {REF} {Length: 1163} {TRANSSPLICED} {Pfam: Ribulose-phosphate 3 epimerase family [PF00834.21, score=201.7]; Quinolinate phosphoribosyl transferase, C-terminal domain [PF01729.21, score=19.0]} {Human: ENSG00000197713, RPE, ribulose-5-phosphate-3-epimerase, [RH, Score=260, Expect=1e-87]} {Mouse: ENSMUSG00000026005, Rpe, ribulose-5-phosphate-3-epimerase, [RH, Score=263, Expect=1e-88]} {Dmel: FBgn0050499, CG30499, [RH, Score=237, Expect=6e-79]} {Celegans: WBGene00017272, F08F8.7, Ribulose-phosphate 3-epimerase, [RH, Score=236, Expect=2e-78]} {Smed: dd_Smed_v6_6342_0_1, dd_Smed_v6_6342_0_1, [RH, Score=265, Expect=5e-90]} {RNA1509_17010, RNA1509_55724} {RNA1310_29573.1, RNA1509_55724} {RNA1509_55724, RNA815_14616} |
| 9. | MligTC455_52515 | 439 | 9.14 | Mlig455_023709 | Neo: - Age: logFC(26M/2M)=-0.641 Region-enriched R7: 2.241/0.01965 |
TPH1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_023709 {REF} {Length: 2707} {Pfam: Biopterin-dependent aromatic amino acid hydroxylase [PF00351.23, score=557.1]; ACT domain [PF01842.27, score=19.1]} {Human: ENSG00000129167, TPH1, tryptophan hydroxylase 1, [RH, Score=529, Expect=0.0]; ENSG00000139287, TPH2, tryptophan hydroxylase 2, [RH, Score=521, Expect=2e-180]} {Mouse: ENSMUSG00000040046, Tph1, tryptophan hydroxylase 1, [RH, Score=525, Expect=0.0]; ENSMUSG00000006764, Tph2, tryptophan hydroxylase 2, [RH, Score=521, Expect=1e-180]} {Dmel: FBgn0035187, Trh, trachealess, [RH, Score=492, Expect=1e-168]} {Celegans: WBGene00006600, tph-1, TryPtophan Hydroxylase; Tryptophan hydroxylase, [RH, Score=455, Expect=2e-154]} {Smed: dd_Smed_v6_8392_0_1, dd_Smed_v6_8392_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_15298} {RNA1310_3347.1} {RNA815_3745} |
| 10. | MligTC455_43171 | 1167 | 24.31 | Mlig455_061729, Mlig455_061758 | Neo: - Age: - |
SEC23IP | 0.952 | - | - | - | 0.952 | - | - | Mlig455_061729 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=3e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=404, Expect=1e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=318, Expect=1e-89]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=99.8, Expect=5e-21]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=222, Expect=3e-59]} {RNA1509_13804, RNA1509_15441} {RNA1310_13226, RNA1509_13804, RNA1509_15441} {RNA1509_13804, RNA1509_15441, RNA815_26293} Mlig455_061758 {REF} {Length: 5318} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=147.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=32.4]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [Score=400, Expect=7e-122]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [Score=402, Expect=5e-123]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [Score=319, Expect=4e-90]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=96.3, Expect=5e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [Score=224, Expect=6e-60]} {RNA1509_13804} {RNA1310_13226} {RNA815_26293} |