TomoSeq data search

Data search

Results for MligTC455_10807

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10807	55	1.14	Mlig455_052430	Neo: - Age: Up-Down-Down		Mlig455_052430 {REF} {Length: 3785} {Pfam: Integrase core domain [PF00665.28, score=52.8]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=96.3, Expect=2e-22]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_10807

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.136	1.115	0.21652	0.85752
RegionR2	3.415	1.115	0.11053	0.41102
RegionR3	-0.268	1.115	0.96850	1.00000
RegionR4	-2.654	1.115	0.99985	1.00000
RegionR5	-3.307	1.115	0.99971	1.00000
RegionR6	1.021	1.115	0.56987	1.00000
RegionR7	2.014	1.115	0.18900	0.79228
RegionR8	5.915	1.115	0.00130	0.05631

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.257	1.115	1.00000	1.00000
RegenerationR2	-1.934	1.115	0.39899	0.81422
RegenerationR3	-1.073	1.115	0.56074	0.88861
RegenerationR4	0.843	1.115	0.79532	0.98498
RegenerationR5	1.037	1.115	0.75864	0.97504
RegenerationR6	-0.222	1.115	0.75598	0.95495
RegenerationBL	-3.86	1.115	0.19381	0.52949
RegenerationTP	-4.69	1.115	0.14726	0.57081

Genes with expression patterns similar to MligTC455_10807

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10807	55	1.14	Mlig455_052430	Neo: - Age: Up-Down-Down		2	1.000	-	-	-	1.000	-	Mlig455_052430 {REF} {Length: 3785} {Pfam: Integrase core domain [PF00665.28, score=52.8]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=96.3, Expect=2e-22]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
2.	MligTC455_32936	30	0.62	Mlig455_039580, Mlig455_039594, Mlig455_051389	Neo: - Age: -	USP15, USP4	0.957	-	-	-	-	0.957	-	Mlig455_039580 {REF} {Length: 2879} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=59.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=125, Expect=5e-32]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [Score=122, Expect=3e-31]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=110, Expect=2e-27]} {RNA1509_52618} {RNA1310_5829.2} {RNA815_1764.1} Mlig455_039594 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=170.8]; DUSP domain [PF06337.14, score=62.3]; Ubiquitin-like domain [PF14836.8, score=47.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=27.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=20.5]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=551, Expect=0.0]; ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=530, Expect=5e-177]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=534, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=2e-68]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=269, Expect=2e-78]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=327, Expect=4e-100]} {RNA1509_1935, RNA1509_25487} {RNA1310_5829.1, RNA1509_1935, RNA1509_25487} {RNA1509_1935, RNA1509_25487, RNA815_1764.1} Mlig455_051389 {REF} {Length: 3870} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=280.2]; DUSP domain [PF06337.14, score=61.6]; Ubiquitin-like domain [PF14836.8, score=47.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=24.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [RH, Score=709, Expect=0.0]; ENSG00000135655, USP15, ubiquitin specific peptidase 15, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=709, Expect=0.0]; ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=6e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=388, Expect=3e-120]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [RH, Score=473, Expect=9e-153]} {RNA1509_1935, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1310_5829.1, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939, RNA815_1764.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_10807

1.14

Mlig455_052430

Neo: -

Age: Up-Down-Down

1.000

MligTC455_32936

0.62

Mlig455_039580, Mlig455_039594, Mlig455_051389

Neo: -

Age: -

USP15, USP4

0.957

Mlig455_039580 {REF} {Length: 2879} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=59.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=125, Expect=5e-32]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [Score=122, Expect=3e-31]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=110, Expect=2e-27]} {RNA1509_52618} {RNA1310_5829.2} {RNA815_1764.1}

Mlig455_039594 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=170.8]; DUSP domain [PF06337.14, score=62.3]; Ubiquitin-like domain [PF14836.8, score=47.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=27.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=20.5]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=551, Expect=0.0]; ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=530, Expect=5e-177]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=534, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=2e-68]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=269, Expect=2e-78]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=327, Expect=4e-100]} {RNA1509_1935, RNA1509_25487} {RNA1310_5829.1, RNA1509_1935, RNA1509_25487} {RNA1509_1935, RNA1509_25487, RNA815_1764.1}

Mlig455_051389 {REF} {Length: 3870} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=280.2]; DUSP domain [PF06337.14, score=61.6]; Ubiquitin-like domain [PF14836.8, score=47.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=24.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [RH, Score=709, Expect=0.0]; ENSG00000135655, USP15, ubiquitin specific peptidase 15, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=709, Expect=0.0]; ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=6e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=388, Expect=3e-120]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [RH, Score=473, Expect=9e-153]} {RNA1509_1935, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1310_5829.1, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939, RNA815_1764.1}