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Results for MligTC455_32936

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32936	30	0.62	Mlig455_039580, Mlig455_039594, Mlig455_051389	Neo: - Age: -	USP15, USP4	Mlig455_039580 {REF} {Length: 2879} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=59.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=125, Expect=5e-32]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [Score=122, Expect=3e-31]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=110, Expect=2e-27]} {RNA1509_52618} {RNA1310_5829.2} {RNA815_1764.1} Mlig455_039594 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=170.8]; DUSP domain [PF06337.14, score=62.3]; Ubiquitin-like domain [PF14836.8, score=47.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=27.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=20.5]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=551, Expect=0.0]; ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=530, Expect=5e-177]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=534, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=2e-68]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=269, Expect=2e-78]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=327, Expect=4e-100]} {RNA1509_1935, RNA1509_25487} {RNA1310_5829.1, RNA1509_1935, RNA1509_25487} {RNA1509_1935, RNA1509_25487, RNA815_1764.1} Mlig455_051389 {REF} {Length: 3870} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=280.2]; DUSP domain [PF06337.14, score=61.6]; Ubiquitin-like domain [PF14836.8, score=47.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=24.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [RH, Score=709, Expect=0.0]; ENSG00000135655, USP15, ubiquitin specific peptidase 15, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=709, Expect=0.0]; ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=6e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=388, Expect=3e-120]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [RH, Score=473, Expect=9e-153]} {RNA1509_1935, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1310_5829.1, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939, RNA815_1764.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32936

0.62

Mlig455_039580, Mlig455_039594, Mlig455_051389

Neo: -

Age: -

USP15, USP4

Mlig455_039580 {REF} {Length: 2879} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=59.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=125, Expect=5e-32]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [Score=122, Expect=3e-31]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=110, Expect=2e-27]} {RNA1509_52618} {RNA1310_5829.2} {RNA815_1764.1}

Mlig455_039594 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=170.8]; DUSP domain [PF06337.14, score=62.3]; Ubiquitin-like domain [PF14836.8, score=47.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=27.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=20.5]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=551, Expect=0.0]; ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=530, Expect=5e-177]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=534, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=2e-68]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=269, Expect=2e-78]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=327, Expect=4e-100]} {RNA1509_1935, RNA1509_25487} {RNA1310_5829.1, RNA1509_1935, RNA1509_25487} {RNA1509_1935, RNA1509_25487, RNA815_1764.1}

Mlig455_051389 {REF} {Length: 3870} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=280.2]; DUSP domain [PF06337.14, score=61.6]; Ubiquitin-like domain [PF14836.8, score=47.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=24.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [RH, Score=709, Expect=0.0]; ENSG00000135655, USP15, ubiquitin specific peptidase 15, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=709, Expect=0.0]; ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=6e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=388, Expect=3e-120]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [RH, Score=473, Expect=9e-153]} {RNA1509_1935, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1310_5829.1, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939, RNA815_1764.1}

Cumulative graph for MligTC455_32936

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.118	1.029	1.00000	1.00000
RegionR2	2.419	1.029	0.68698	1.00000
RegionR3	-0.782	1.029	0.98647	1.00000
RegionR4	0.477	1.029	0.80914	1.00000
RegionR5	0.51	1.029	0.94156	1.00000
RegionR6	1.62	1.029	0.79304	1.00000
RegionR7	-0.955	1.029	1.00000	1.00000
RegionR8	-1.171	1.029	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.102	1.029	1.00000	1.00000
RegenerationR2	-0.453	1.029	0.92166	1.00000
RegenerationR3	3.915	1.029	0.29593	0.72716
RegenerationR4	1.796	1.029	0.75908	0.97245
RegenerationR5	1.638	1.029	0.52028	0.86987
RegenerationR6	1.626	1.029	0.51436	0.81639
RegenerationBL	1.016	1.029	0.99980	1.00000
RegenerationTP	3.772	1.029	0.41295	0.83901

Genes with expression patterns similar to MligTC455_32936

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32936	30	0.62	Mlig455_039580, Mlig455_039594, Mlig455_051389	Neo: - Age: -	USP15, USP4	3	1.000	-	-	-	1.000	1.000	Mlig455_039580 {REF} {Length: 2879} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=59.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=125, Expect=5e-32]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [Score=122, Expect=3e-31]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=110, Expect=2e-27]} {RNA1509_52618} {RNA1310_5829.2} {RNA815_1764.1} Mlig455_039594 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=170.8]; DUSP domain [PF06337.14, score=62.3]; Ubiquitin-like domain [PF14836.8, score=47.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=27.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=20.5]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=551, Expect=0.0]; ENSG00000114316, USP4, ubiquitin specific peptidase 4, [Score=530, Expect=5e-177]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=534, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=2e-68]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=269, Expect=2e-78]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [Score=327, Expect=4e-100]} {RNA1509_1935, RNA1509_25487} {RNA1310_5829.1, RNA1509_1935, RNA1509_25487} {RNA1509_1935, RNA1509_25487, RNA815_1764.1} Mlig455_051389 {REF} {Length: 3870} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=280.2]; DUSP domain [PF06337.14, score=61.6]; Ubiquitin-like domain [PF14836.8, score=47.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]; Ubiquitin-specific protease C-terminal [PF14533.8, score=24.9]} {Human: ENSG00000114316, USP4, ubiquitin specific peptidase 4, [RH, Score=709, Expect=0.0]; ENSG00000135655, USP15, ubiquitin specific peptidase 15, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000032612, Usp4, ubiquitin specific peptidase 4 (proto-oncogene), [RH, Score=709, Expect=0.0]; ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0036913, Usp32, Ubiquitin specific protease 32, [Score=245, Expect=6e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=388, Expect=3e-120]} {Smed: dd_Smed_v6_2284_0_1, dd_Smed_v6_2284_0_1, [RH, Score=473, Expect=9e-153]} {RNA1509_1935, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1310_5829.1, RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939} {RNA1509_26744, RNA1509_45920, RNA1509_52618, RNA1509_5939, RNA815_1764.1}
2.	MligTC455_10807	55	1.14	Mlig455_052430	Neo: - Age: Up-Down-Down		0.957	-	-	-	-	0.957	-	Mlig455_052430 {REF} {Length: 3785} {Pfam: Integrase core domain [PF00665.28, score=52.8]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=96.3, Expect=2e-22]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
3.	MligTC455_16269	20	0.42	Mlig455_053616	Neo: - Age: - Region-enriched R4: 5.924/0.00667		0.953	-	-	-	-	-	0.953	Mlig455_053616 {REF} {Length: 1143} {TRANSSPLICED} {Pfam: ParB-like nuclease domain [PF02195.20, score=32.7]} {RNA1509_13616} {RNA1310_15256} {RNA815_15257}
4.	MligTC455_49792	72	1.51	Mlig455_024974	Neo: - Age: -	DAP3	0.95	-	-	-	-	0.950	-	Mlig455_024974 {REF} {Length: 1894} {Pfam: Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=152.6]} {Human: ENSG00000132676, DAP3, death associated protein 3, [RH, Score=222, Expect=3e-68]} {Mouse: ENSMUSG00000068921, Dap3, death associated protein 3, [RH, Score=223, Expect=7e-69]} {Dmel: FBgn0034727, mRpS29, mitochondrial ribosomal protein S29, [RH, Score=177, Expect=2e-51]} {Celegans: WBGene00000933, dap-3, Mammalian cell Death Associated Protein related; Putative uncharacterized protein, [RH, Score=127, Expect=8e-33]} {Smed: dd_Smed_v6_3336_0_1, dd_Smed_v6_3336_0_1, [RH, Score=178, Expect=3e-52]} {RNA1509_30218, RNA1509_45582} {RNA1310_12179, RNA1509_45582} {RNA1509_45582, RNA815_10991}