TomoSeq data search

Data search

Results for MligTC455_10980

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10980

10

0.20

Mlig455_022684

Neo: -

Age: -

Mlig455_022684 {REF} {Length: 184} {NoTransDecoderORF} {RNA1509_49089} {RNA1310_64291}

Cumulative graph for MligTC455_10980

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.649	0.642	1.00000	1.00000
RegionR2	2.144	0.642	0.99996	1.00000
RegionR3	0.195	0.642	0.99994	1.00000
RegionR4	-2.504	0.642	0.99982	1.00000
RegionR5	-0.955	0.642	0.99988	1.00000
RegionR6	-0.453	0.642	0.99992	1.00000
RegionR7	1.066	0.642	0.99998	1.00000
RegionR8	2.156	0.642	0.99999	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.229	0.642	0.99996	1.00000
RegenerationR2	1.339	0.642	0.99990	1.00000
RegenerationR3	2.074	0.642	1.00000	1.00000
RegenerationR4	1.46	0.642	0.99958	1.00000
RegenerationR5	1.141	0.642	0.99964	1.00000
RegenerationR6	0.02	0.642	0.99959	1.00000
RegenerationBL	-2.452	0.642	0.99992	1.00000
RegenerationTP	-1.712	0.642	0.99993	1.00000

Genes with expression patterns similar to MligTC455_10980

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10980	10	0.2	Mlig455_022684	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_022684 {REF} {Length: 184} {NoTransDecoderORF} {RNA1509_49089} {RNA1310_64291}
2.	MligTC455_28052	115	2.4	Mlig455_031896, Mlig455_056076	Neo: - Age: Up-Up-Down		0.984	-	-	-	-	0.984	-	Mlig455_031896 {REF} {Length: 3140} {TRANSSPLICED} {RNA1509_58475} {RNA1310_22436} {RNA815_11429} Mlig455_056076 {REF} {Length: 4211} {TRANSSPLICED} {RNA1509_58475} {RNA1310_12129} {RNA815_7897}
3.	MligTC455_36069	93	1.94	Mlig455_054357	Neo: - Age: -	C17orf97	0.977	-	-	-	-	0.977	-	Mlig455_054357 {REF} {Length: 1067} {Human: ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]; ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=45.8, Expect=7e-06]} {RNA1509_48416} {RNA1310_106903}
4.	MligTC455_23974	18	0.38	Mlig455_022922, Mlig455_055203	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.700		0.961	-	-	-	-	0.961	-	Mlig455_022922 {REF} {Length: 1992} {RNA1509_39040} {RNA1310_886.1, RNA1509_39040} {RNA1509_39040, RNA815_4579} Mlig455_055203 {REF} {Length: 1177} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}
5.	MligTC455_31873	72	1.5	Mlig455_023256	Neo: - Age: logFC(26M/2M)=-0.591		0.96	-	-	-	-	0.960	-	Mlig455_023256 {REF} {Length: 3187} {RNA1509_6194} {RNA1310_2129.1} {RNA815_15794}
6.	MligTC455_27969	203	4.24	Mlig455_055219, Mlig455_055313	Neo: - Age: -	ADARB1	0.955	-	-	-	-	0.955	-	Mlig455_055219 {REF} {Length: 3087} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=288.8]; Double-stranded RNA binding motif [PF00035.28, score=44.8]} {Human: ENSG00000197381, ADARB1, adenosine deaminase, RNA specific B1, [RH, Score=346, Expect=9e-110]} {Mouse: ENSMUSG00000020262, Adarb1, adenosine deaminase, RNA-specific, B1, [RH, Score=358, Expect=3e-114]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [RH, Score=296, Expect=2e-91]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [RH, Score=184, Expect=2e-51]} {Smed: dd_Smed_v6_4538_0_1, dd_Smed_v6_4538_0_1, [RH, Score=235, Expect=5e-68]} {RNA1509_57256} {RNA1310_8624} {RNA815_8285} Mlig455_055313 {REF} {Length: 2868} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=289.4]; Double-stranded RNA binding motif [PF00035.28, score=44.8]} {Human: ENSG00000197381, ADARB1, adenosine deaminase, RNA specific B1, [RH, Score=347, Expect=5e-110]} {Mouse: ENSMUSG00000020262, Adarb1, adenosine deaminase, RNA-specific, B1, [RH, Score=356, Expect=1e-113]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [RH, Score=290, Expect=8e-89]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [RH, Score=184, Expect=3e-51]} {Smed: dd_Smed_v6_4538_0_1, dd_Smed_v6_4538_0_1, [RH, Score=236, Expect=3e-68]} {RNA1509_57256, RNA1509_57608} {RNA1310_8624, RNA1509_57256, RNA1509_57608} {RNA1509_57256, RNA1509_57608, RNA815_8285}
7.	MligTC455_43840	32	0.67	Mlig455_027957	Neo: - Age: -	SYT9	0.955	-	-	-	-	0.955	-	Mlig455_027957 {REF} {Length: 2429} {Pfam: C2 domain [PF00168.32, score=117.2]} {Human: ENSG00000170743, SYT9, synaptotagmin 9, [Score=194, Expect=6e-56]} {Mouse: ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=193, Expect=1e-55]} {Dmel: FBgn0261090, Sytbeta, Synaptotagmin beta, [RH, Score=188, Expect=6e-53]} {Celegans: WBGene00004923, snt-3, SyNapTotagmin, [Score=152, Expect=1e-42]} {Smed: dd_Smed_v6_19328_0_1, dd_Smed_v6_19328_0_1, [RH, Score=164, Expect=2e-45]} {RNA1509_57021} {RNA1310_11363} {RNA815_14366}
8.	MligTC455_24080	169	3.53	Mlig455_006169	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.888	MUC4	0.951	-	-	-	-	0.951	-	Mlig455_006169 {REF} {Length: 9412} {Pfam: EGF domain [PF12947.9, score=134.6]; Calcium-binding EGF domain [PF07645.17, score=90.8]; von Willebrand factor type D domain [PF00094.27, score=88.8]; Nidogen-like [PF06119.16, score=53.2]; MSP1 EGF domain 1 [PF12946.9, score=52.7]; Complement Clr-like EGF-like [PF12662.9, score=38.8]; Invasin, domain 3 [PF09134.12, score=31.3]; Human growth factor-like EGF [PF12661.9, score=25.2]; Sox 17/18 central domain [PF12067.10, score=23.5]; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term [PF04422.15, score=22.8]} {Human: ENSG00000145113, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]; ENSG00000278303, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]; ENSG00000278468, MUC4, mucin 4, cell surface associated, [Score=101, Expect=1e-20]; ENSG00000273984, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]; ENSG00000276613, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]; ENSG00000273822, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]; ENSG00000277585, MUC4, mucin 4, cell surface associated, [Score=101, Expect=2e-20]} {Mouse: ENSMUSG00000079620, Muc4, mucin 4, [Score=98.6, Expect=9e-20]} {Dmel: FBgn0053196, dpy, dumpy, [Score=76.6, Expect=4e-13]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=74.3, Expect=1e-12]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=72.0, Expect=7e-12]} {RNA1509_26110} {RNA1310_679.1} {RNA815_472.1}
9.	MligTC455_37809	28	0.58	Mlig455_053421	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_053421 {REF} {Length: 1283} {RNA1509_44223} {RNA1310_90388} {RNA815_47782}

Berezikov Lab - 2020-2021 © ERIBA