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Results for MligTC455_10995

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10995 16 0.34 Mlig455_067525

Neo: -

Age: -

 SCNN1B Mlig455_067525 {REF} {Length: 3493} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=100.7]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=48.9, Expect=7e-06]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=48.1, Expect=1e-05]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_16327} {RNA1310_17847} {RNA815_27317}

Cumulative graph for MligTC455_10995

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.763 0.789 1.00000 1.00000
RegionR2 1.811 0.789 0.56242 0.92430
RegionR3 1.999 0.789 0.38154 0.91296
RegionR4 -1.192 0.789 0.99965 1.00000
RegionR5 0.696 0.789 0.55461 0.91508
RegionR6 -1.269 0.789 0.99978 1.00000
RegionR7 -1.112 0.789 0.99986 1.00000
RegionR8 -0.17 0.789 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.073 0.789 0.99990 1.00000
RegenerationR2 -1.288 0.789 0.25978 0.70638
RegenerationR3 -1.849 0.789 0.37193 0.78483
RegenerationR4 0.781 0.789 0.51004 0.87432
RegenerationR5 1.442 0.789 0.34390 0.76026
RegenerationR6 0.311 0.789 0.64055 0.89369
RegenerationBL -2.063 0.789 0.99983 1.00000
RegenerationTP -1.288 0.789 0.99987 1.00000


Genes with expression patterns similar to MligTC455_10995

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10995 16 0.34 Mlig455_067525

Neo: -

Age: -

 SCNN1B 2 - - - - 1.000 1.000 Mlig455_067525 {REF} {Length: 3493} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=100.7]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=48.9, Expect=7e-06]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=48.1, Expect=1e-05]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_16327} {RNA1310_17847} {RNA815_27317}
2. MligTC455_37337 45 0.94 Mlig455_055736

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.834

 GRIK2 1 - - - - - 1.000 Mlig455_055736 {REF} {Length: 3114} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=62.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.6]; Ligand-gated ion channel [PF00060.28, score=47.4]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=157, Expect=6e-39]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=159, Expect=1e-39]} {Dmel: FBgn0038837, CG3822, [Score=152, Expect=2e-37]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=144, Expect=2e-35]} {RNA1509_28307} {RNA1310_720.1} {RNA815_4149.1}
3. MligTC455_38493 548 11.42 Mlig455_012266

Neo: -

Age: -

 SHANK3 0.976 - - - - 0.976 - Mlig455_012266 {REF} {Length: 7018} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=72.9]; Ankyrin repeats (3 copies) [PF12796.9, score=67.3]; Ankyrin repeats (many copies) [PF13857.8, score=60.3]; PDZ domain [PF17820.3, score=45.6]; Ankyrin repeat [PF00023.32, score=44.3]; PDZ domain [PF00595.26, score=42.4]; Ankyrin repeat [PF13606.8, score=40.4]; PDZ domain [PF13180.8, score=22.8]} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=352, Expect=2e-98]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=352, Expect=2e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=349, Expect=1e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=1e-107]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [RH, Score=398, Expect=2e-118]} {RNA1509_43591, RNA1509_43983} {RNA1310_4641.1, RNA1509_43591} {RNA1509_43591, RNA815_176.1}
4. MligTC455_16012 42 0.87 Mlig455_051941

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_051941 {REF} {Length: 640} {RNA1310_68751} {RNA815_35508}
5. MligTC455_14399 27 0.56 Mlig455_058566

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_058566 {REF} {Length: 603} {NoTransDecoderORF}
6. MligTC455_15455 65 1.34 Mlig455_028134, Mlig455_028275

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_028134 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_4874} {RNA1310_6306} {RNA815_9668.1}

Mlig455_028275 {REF} {Length: 526} {NoTransDecoderORF} {RNA1509_32071} {RNA1310_6306} {RNA815_9668.1}
7. MligTC455_24973 42 0.88 Mlig455_065756

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_065756 {REF} {Length: 759} {RNA1509_29619} {RNA1310_124411} {RNA815_54604}
8. MligTC455_42305 19 0.39 Mlig455_068016

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_068016 {REF} {Length: 1185} {NoTransDecoderORF} {RNA1310_134973}
9. MligTC455_34516 21 0.44 Mlig455_038819

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_038819 {REF} {Length: 1422} {NoTransDecoderORF} {RNA1310_38105} {RNA815_46198}
10. MligTC455_29270 385 8.02 Mlig455_058358

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=3.015

Region-enriched R2: 2.086/0.01110

 0.956 - - - - 0.956 - Mlig455_058358 {REF} {Length: 1887} {RNA1509_21262} {RNA1310_22909} {RNA815_27648}
11. MligTC455_37120 82 1.71 Mlig455_015330

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_015330 {REF} {Length: 8420} {Pfam: Dynamin family [PF00350.25, score=33.5]} {Celegans: WBGene00015646, mlt-10, [Score=122, Expect=1e-27]} {RNA1509_20670} {RNA1310_2372} {RNA815_26487}
12. MligTC455_25563 24 0.51 Mlig455_015495

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_015495 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1509_48973} {RNA1310_27704} {RNA815_36286}
13. MligTC455_00322 13 0.26 Mlig455_027549

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_027549 {REF} {Length: 846} {NoTransDecoderORF} {RNA1310_22096}
14. MligTC455_22841 20 0.41 Mlig455_066350

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_066350 {REF} {Length: 694} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35987, RNA1509_46319} {RNA1310_35806, RNA1509_35987, RNA1509_46319} {RNA1509_35987, RNA1509_46319, RNA815_14596}
15. MligTC455_40395 12 0.26 Mlig455_047575, Mlig455_069695

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_047575 {REF} {Length: 854} {NoTransDecoderORF} {RNA1310_129563}

Mlig455_069695 {REF} {Length: 620} {NoTransDecoderORF} {RNA1310_129563}

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