M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25563

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25563 24 0.51 Mlig455_015495

Neo: -

Age: -

 Mlig455_015495 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1509_48973} {RNA1310_27704} {RNA815_36286}

Cumulative graph for MligTC455_25563

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.43 1.049 0.99992 1.00000
RegionR2 -1.767 1.049 0.99982 1.00000
RegionR3 -1.229 1.049 0.99987 1.00000
RegionR4 2.2 1.049 0.10799 0.32364
RegionR5 1.756 1.049 0.09612 0.29712
RegionR6 -1.454 1.049 0.99988 1.00000
RegionR7 -0.685 1.049 0.99990 1.00000
RegionR8 -0.251 1.049 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.143 1.049 0.99998 1.00000
RegenerationR2 3.579 1.049 0.01680 0.21232
RegenerationR3 3.323 1.049 0.09329 0.49175
RegenerationR4 1.537 1.049 0.47250 0.85483
RegenerationR5 -0.326 1.049 0.71556 0.95811
RegenerationR6 3.422 1.049 0.09046 0.37433
RegenerationBL -0.909 1.049 0.99994 1.00000
RegenerationTP 2.163 1.049 0.44919 0.86656


Genes with expression patterns similar to MligTC455_25563

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25563 24 0.51 Mlig455_015495

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_015495 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1509_48973} {RNA1310_27704} {RNA815_36286}
2. MligTC455_15455 65 1.34 Mlig455_028134, Mlig455_028275

Neo: -

Age: -

 1.729 - - - 0.773 0.956 -

Mlig455_028134 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_4874} {RNA1310_6306} {RNA815_9668.1}

Mlig455_028275 {REF} {Length: 526} {NoTransDecoderORF} {RNA1509_32071} {RNA1310_6306} {RNA815_9668.1}
3. MligTC455_10729 44 0.93 Mlig455_011434

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_011434 {REF} {Length: 429} {NoTransDecoderORF} {RNA1509_36541} {RNA1310_37624} {RNA815_20457.1}
4. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
5. MligTC455_07970 56 1.17 Mlig455_033539

Neo: -

Age: -

 ZNF142 0.977 - - - - 0.977 - Mlig455_033539 {REF} {Length: 3927} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=51.2]; Zinc finger, C2H2 type [PF00096.28, score=45.1]; Zinc-finger double domain [PF13465.8, score=44.1]; C2H2-type zinc finger [PF13894.8, score=19.6]} {Human: ENSG00000115568, ZNF142, zinc finger protein 142, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=80.9, Expect=3e-15]; ENSMUSG00000029249, Rest, RE1-silencing transcription factor, [Score=79.3, Expect=8e-15]} {Dmel: FBgn0001180, hb, hunchback, [RH, Score=189, Expect=4e-51]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_47627_0_1, dd_Smed_v6_47627_0_1, [Score=296, Expect=9e-94]} {RNA1310_53058} {RNA815_35691}
6. MligTC455_32657 539 11.24 Mlig455_039620, Mlig455_051421

Neo: -

Age: -

Region-enriched R4: 2.163/0.04456

 CYP2C8 0.972 - - - - 0.972 -

Mlig455_039620 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=304.2]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=243, Expect=6e-74]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=243, Expect=9e-74]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=238, Expect=2e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=235, Expect=1e-70]; ENSG00000100197, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=234, Expect=3e-70]; ENSG00000275211, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=234, Expect=2e-70]; ENSG00000282966, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000272000, AC236040.1, cytochrome P450 family 2 subfamily D member 6 pseudogene, [Score=233, Expect=5e-70]; ENSG00000198077, CYP2A7, cytochrome P450 family 2 subfamily A member 7, [Score=233, Expect=5e-70]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=233, Expect=5e-70]; ENSG00000280905, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000272532, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000283284, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=232, Expect=9e-70]} {Mouse: ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=275, Expect=5e-86]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=265, Expect=2e-82]} {Dmel: FBgn0036910, Cyp305a1, [Score=202, Expect=1e-58]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=222, Expect=3e-66]} {RNA1509_22095} {RNA1310_19317} {RNA815_7777}

Mlig455_051421 {REF} {Length: 3607} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=304.2]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=243, Expect=6e-74]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=243, Expect=9e-74]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=238, Expect=2e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=235, Expect=1e-70]; ENSG00000100197, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=234, Expect=3e-70]; ENSG00000275211, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=234, Expect=2e-70]; ENSG00000282966, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000272000, AC236040.1, cytochrome P450 family 2 subfamily D member 6 pseudogene, [Score=233, Expect=5e-70]; ENSG00000198077, CYP2A7, cytochrome P450 family 2 subfamily A member 7, [Score=233, Expect=5e-70]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=233, Expect=5e-70]; ENSG00000280905, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000272532, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=233, Expect=5e-70]; ENSG00000283284, CYP2D6, cytochrome P450 family 2 subfamily D member 6, [Score=232, Expect=9e-70]} {Mouse: ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=275, Expect=5e-86]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=265, Expect=2e-82]} {Dmel: FBgn0036910, Cyp305a1, [Score=202, Expect=1e-58]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=222, Expect=3e-66]} {RNA1509_22095, RNA1509_29151} {RNA1310_19317, RNA1509_22095, RNA1509_29151} {RNA1509_22095, RNA1509_29151, RNA815_7777}
7. MligTC455_21023 30 0.62 Mlig455_009468, Mlig455_035246

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_009468 {REF} {Length: 834} {TRANSSPLICED} {RNA1509_59965} {RNA1310_53720} {RNA815_38962.1}

Mlig455_035246 {REF} {Length: 864} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59965} {RNA1310_40914} {RNA815_38962.2}
8. MligTC455_52759 37 0.77 Mlig455_061306

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_061306 {REF} {Length: 1258} {TRANSSPLICED} {RNA1310_96910}
9. MligTC455_14399 27 0.56 Mlig455_058566

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_058566 {REF} {Length: 603} {NoTransDecoderORF}
10. MligTC455_28622 626 13.05 Mlig455_028335, Mlig455_066149

Neo: -

Age: Down-Up-Down

 ANO7 0.964 - - - - 0.964 -

Mlig455_028335 {REF} {Length: 5358} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.5]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=98.7]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=303, Expect=5e-88]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=303, Expect=6e-89]} {Dmel: FBgn0036235, CG6938, [Score=279, Expect=2e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=432, Expect=1e-137]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=310, Expect=7e-92]} {RNA1509_16739} {RNA1310_3159} {RNA815_709.1}

Mlig455_066149 {REF} {Length: 4069} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.3]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=105.2]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=301, Expect=6e-87]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=300, Expect=2e-87]} {Dmel: FBgn0036235, CG6938, [Score=280, Expect=3e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=440, Expect=5e-140]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=311, Expect=4e-92]} {RNA1509_16739} {RNA1310_3045} {RNA815_709.1}
11. MligTC455_14697 10 0.21 Mlig455_045505

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_045505 {REF} {Length: 658} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=27.6]} {RNA1509_45868} {RNA1310_53876} {RNA815_13104.1}
12. MligTC455_26106 32 0.67 Mlig455_036980

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_036980 {REF} {Length: 3414} {RNA1509_41127} {RNA1310_25191} {RNA815_5881.1}
13. MligTC455_17679 365 7.59 Mlig455_007359, Mlig455_066674

Neo: -

Age: -

Region-enriched R2: 2.744/0.00362

 0.961 - - - - 0.961 -

Mlig455_007359 {REF} {Length: 1638} {RNA1509_18138} {RNA1310_24629} {RNA815_31762}

Mlig455_066674 {REF} {Length: 1869} {RNA1509_18138, RNA1509_36034} {RNA1310_24629, RNA1509_18138, RNA1509_36034} {RNA1509_18138, RNA1509_36034, RNA815_31762}
14. MligTC455_30695 18 0.38 Mlig455_054232

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_054232 {REF} {Length: 3944} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.9]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=258, Expect=9e-82]} {RNA1509_30575} {RNA1310_870} {RNA815_993.1}
15. MligTC455_48582 11 0.24 Mlig455_018988

Neo: -

Age: -

 ANGPTL1 0.958 - - - - 0.958 - Mlig455_018988 {REF} {Length: 1198} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.4]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=95.9, Expect=9e-22]; ENSG00000116147, TNR, tenascin R, [Score=94.7, Expect=4e-21]; ENSG00000160339, FCN2, ficolin 2, [Score=91.3, Expect=9e-21]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=94.4, Expect=4e-21]; ENSMUSG00000015829, Tnr, tenascin R, [Score=94.4, Expect=4e-21]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=91.3, Expect=2e-20]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=90.9, Expect=4e-20]} {Dmel: FBgn0050280, CG30280, [Score=89.0, Expect=2e-20]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_58275} {RNA815_44587}
16. MligTC455_32073 43 0.9 Mlig455_043621

Neo: Irradiation

Age: -

Region-enriched R4: 3.888/0.00237

 0.956 - - - - 0.956 - Mlig455_043621 {REF} {Length: 2838} {RNA1509_45511} {RNA1310_28603.1} {RNA815_29511.1}
17. MligTC455_38723 909 18.93 Mlig455_045064

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.453

 PANK4 0.956 - - - 0.956 - - Mlig455_045064 {REF} {Length: 1568} {Pfam: Fumble [PF03630.16, score=135.4]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=79.0, Expect=7e-16]; ENSMUSG00000033610, Pank1, pantothenate kinase 1, [Score=77.8, Expect=2e-15]} {Dmel: FBgn0011205, fbl, fumble, [Score=90.5, Expect=4e-20]} {Smed: dd_Smed_v6_2075_0_1, dd_Smed_v6_2075_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_29195, RNA1509_51737} {RNA1310_44453, RNA1509_29195, RNA1509_51737} {RNA1509_29195, RNA1509_51737, RNA815_9614}
18. MligTC455_43115 12 0.25 Mlig455_011719

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_011719 {REF} {Length: 1831} {RNA1310_81493} {RNA815_42582}
19. MligTC455_43323 33 0.69 Mlig455_041907

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.308

 0.956 - - - - 0.956 - Mlig455_041907 {REF} {Length: 2031} {RNA1509_49821} {RNA1310_22780, RNA1509_49821} {RNA1509_49821, RNA815_9762}
20. MligTC455_42305 19 0.39 Mlig455_068016

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_068016 {REF} {Length: 1185} {NoTransDecoderORF} {RNA1310_134973}
21. MligTC455_54131 867 18.07 Mlig455_037671, Mlig455_037773

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.326

 SCNN1B 0.955 - - - 0.955 - -

Mlig455_037671 {REF} {Length: 2306} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=164.4]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=60.8, Expect=4e-09]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=75.1, Expect=4e-14]} {Smed: dd_Smed_v6_15920_0_1, dd_Smed_v6_15920_0_1, [Score=281, Expect=6e-88]} {RNA1509_22025} {RNA1310_7347} {RNA815_2211}

Mlig455_037773 {REF} {Length: 2304} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=164.4]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=60.8, Expect=4e-09]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=75.1, Expect=4e-14]} {Smed: dd_Smed_v6_15920_0_1, dd_Smed_v6_15920_0_1, [Score=281, Expect=6e-88]} {RNA1509_22025} {RNA1310_7347, RNA1509_22025} {RNA1509_22025, RNA815_2211}
22. MligTC455_11040 19 0.4 Mlig455_019286, Mlig455_030885

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_019286 {REF} {Length: 1415} {NoTransDecoderORF}

Mlig455_030885 {REF} {Length: 635} {NoTransDecoderORF}
23. MligTC455_21224 54 1.12 Mlig455_017282

Neo: Int S/G2/M

Age: -

 PKD1L2 0.954 - - - - 0.954 - Mlig455_017282 {REF} {Length: 6154} {Pfam: PLAT/LH2 domain [PF01477.25, score=21.6]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=83.2, Expect=4e-15]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=76.3, Expect=3e-13]; ENSMUSG00000048827, Pkd1l3, polycystic kidney disease 1 like 3, [Score=75.9, Expect=5e-13]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=75.5, Expect=6e-13]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=66.6, Expect=1e-10]} {RNA1509_27380} {RNA1310_81531} {RNA815_1311.2}
24. MligTC455_29290 207 4.31 Mlig455_006941

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.393

 SELENOI 0.954 - - - - 0.954 - Mlig455_006941 {REF} {Length: 2533} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=44.7]} {Human: ENSG00000138018, SELENOI, selenoprotein I, [Score=272, Expect=5e-88]} {Mouse: ENSMUSG00000075703, Selenoi, selenoprotein I, [Score=272, Expect=3e-88]} {Dmel: FBgn0053116, CG33116, [Score=275, Expect=5e-89]} {Celegans: WBGene00018797, F54D7.2, [Score=268, Expect=9e-87]} {Smed: dd_Smed_v6_6886_0_1, dd_Smed_v6_6886_0_1, [Score=291, Expect=5e-96]} {RNA1509_43108} {RNA1310_14774.1} {RNA815_18279}
25. MligTC455_10995 16 0.34 Mlig455_067525

Neo: -

Age: -

 SCNN1B 0.953 - - - - 0.953 - Mlig455_067525 {REF} {Length: 3493} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=100.7]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=59.3, Expect=6e-09]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=48.9, Expect=7e-06]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=48.1, Expect=1e-05]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_16327} {RNA1310_17847} {RNA815_27317}
26. MligTC455_14926 19 0.39 Mlig455_016619

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_016619 {REF} {Length: 1819} {NoTransDecoderORF} {RNA1310_92064}
27. MligTC455_28766 46 0.95 Mlig455_041904

Neo: -

Age: -

Region-enriched R6: 3.641/0.01524

 PTRHD1 0.953 - - - - 0.953 - Mlig455_041904 {REF} {Length: 2121} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=84.9]} {Human: ENSG00000184924, PTRHD1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=103, Expect=3e-29]} {Mouse: ENSMUSG00000096199, Ptrhd1, peptidyl-tRNA hydrolase domain containing 1, [RH, Score=107, Expect=6e-31]} {Dmel: FBgn0038446, CG14903, [RH, Score=140, Expect=2e-44]} {Celegans: WBGene00050885, Y94H6A.12, [RH, Score=122, Expect=5e-37]} {Smed: dd_Smed_v6_6409_0_1, dd_Smed_v6_6409_0_1, [RH, Score=127, Expect=4e-39]} {RNA1509_51707} {RNA1310_42234} {RNA815_30800}
28. MligTC455_16012 42 0.87 Mlig455_051941

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_051941 {REF} {Length: 640} {RNA1310_68751} {RNA815_35508}
29. MligTC455_38809 89 1.85 Mlig455_010159, Mlig455_018689, Mlig455_018690, Mlig455_040237, Mlig455_051161, Mlig455_055776, Mlig455_058202, Mlig455_068783

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.196

 0.952 - - - - 0.952 -

Mlig455_010159 {REF} {Length: 4808} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.5]; Integrase core domain [PF00665.28, score=45.9]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_018689 {REF} {Length: 383} {Pfam: Zinc knuckle [PF00098.25, score=35.4]} {RNA1509_37828} {RNA1310_12941} {RNA815_12994}

Mlig455_018690 {REF} {Length: 824} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=28.1]; H2C2 zinc finger [PF09337.12, score=19.0]} {RNA1509_37828} {RNA1310_20398} {RNA815_3168.1}

Mlig455_040237 {REF} {Length: 407} {Pfam: Integrase core domain [PF00665.28, score=27.8]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_051161 {REF} {Length: 2606} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=81.6]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=48.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=5e-27]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Mlig455_055776 {REF} {Length: 4218} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=49.2]} {RNA1509_12358} {RNA1310_2289, RNA1509_12358} {RNA1509_12358, RNA815_3168.1}

Mlig455_058202 {REF} {Length: 1723} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.0]; Aspartyl protease [PF13650.8, score=31.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Zinc knuckle [PF00098.25, score=27.2]; Aspartyl protease [PF09668.12, score=20.1]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=101, Expect=3e-22]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}

Mlig455_068783 {REF} {Length: 3243} {Pfam: Aspartyl protease [PF13650.8, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF09668.12, score=23.3]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}
30. MligTC455_30505 183 3.81 Mlig455_046017

Neo: -

Age: -

 CHRNA3 0.951 - - - - 0.951 - Mlig455_046017 {REF} {Length: 2653} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=200.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=164.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=338, Expect=9e-110]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=329, Expect=2e-106]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=345, Expect=6e-113]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=334, Expect=1e-108]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=395, Expect=3e-132]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=335, Expect=3e-109]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=475, Expect=5e-164]} {RNA1509_13864, RNA1509_48088} {RNA1310_13542, RNA1509_48088} {RNA1509_48088, RNA815_5136}
31. MligTC455_36107 41 0.86 Mlig455_024610

Neo: -

Age: Down-Up-Up

 LRRC32 0.951 - - - 0.951 - - Mlig455_024610 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=50.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=50.2]; IQ calmodulin-binding motif [PF00612.29, score=44.3]} {Human: ENSG00000137507, LRRC32, leucine rich repeat containing 32, [Score=61.6, Expect=1e-08]; ENSG00000182504, CEP97, centrosomal protein 97, [Score=60.5, Expect=3e-08]; ENSG00000177595, PIDD1, p53-induced death domain protein 1, [Score=59.7, Expect=5e-08]} {Mouse: ENSMUSG00000056215, Lrguk, leucine-rich repeats and guanylate kinase domain containing, [Score=61.6, Expect=8e-09]; ENSMUSG00000047766, Lrrc49, leucine rich repeat containing 49, [Score=59.7, Expect=2e-08]; ENSMUSG00000025507, Pidd1, p53 induced death domain protein 1, [Score=59.7, Expect=3e-08]} {Dmel: FBgn0033250, CG14762, [Score=54.7, Expect=5e-07]} {Smed: dd_Smed_v6_12813_0_1, dd_Smed_v6_12813_0_1, [RH, Score=78.6, Expect=3e-14]} {RNA1509_9054} {RNA1310_5331.1, RNA1509_9054} {RNA1509_9054, RNA815_12796}
32. MligTC455_38500 357 7.43 Mlig455_022541, Mlig455_022582

Neo: -

Age: Down-Up-Down

 0.951 - - - - 0.951 -

Mlig455_022541 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_49815, RNA1509_55125} {RNA1310_51594, RNA1509_49815} {RNA1509_49815, RNA815_9959.1}

Mlig455_022582 {REF} {Length: 1139} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_24875, RNA1509_55125} {RNA1310_51594, RNA1509_24875} {RNA1509_24875, RNA815_9959.1}
33. MligTC455_44114 182 3.79 Mlig455_031764

Neo: -

Age: -

 PHKG2 0.951 - - - - 0.951 - Mlig455_031764 {REF} {Length: 3526} {Pfam: Protein kinase domain [PF00069.27, score=239.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=112.4]; WSC domain [PF01822.21, score=34.3]; Haspin like kinase domain [PF12330.10, score=24.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.7]; PhoP regulatory network protein YrbL [PF10707.11, score=19.1]; Phosphotransferase enzyme family [PF01636.25, score=18.8]; Kinase-like [PF14531.8, score=18.4]; Fungal protein kinase [PF17667.3, score=17.6]} {Human: ENSG00000156873, PHKG2, phosphorylase kinase catalytic subunit gamma 2, [Score=352, Expect=5e-116]; ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [Score=351, Expect=1e-115]} {Mouse: ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=355, Expect=2e-117]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [Score=354, Expect=4e-117]} {Celegans: WBGene00021753, Y50D7A.3, [Score=291, Expect=9e-92]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=214, Expect=2e-62]} {RNA1509_30070} {RNA1310_21069, RNA1509_30070} {RNA1509_30070, RNA815_11645}
34. MligTC455_30589 76 1.58 Mlig455_014800, Mlig455_042626

Neo: -

Age: Up-Down-Up

 0.95 - - - - 0.950 -

Mlig455_014800 {REF} {Length: 4522} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=132.9]} {Celegans: WBGene00007723, C25F9.2, [Score=290, Expect=2e-84]} {RNA1509_4648} {RNA1310_3417} {RNA815_2072}

Mlig455_042626 {REF} {Length: 4176} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=141.2]} {Celegans: WBGene00007723, C25F9.2, [Score=291, Expect=7e-85]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}
35. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.95 - - - - 0.950 - Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
36. MligTC455_47156 156 3.25 Mlig455_067889

Neo: -

Age: Up-Down-Down

 0.95 - - - - 0.950 - Mlig455_067889 {REF} {Length: 2576} {TRANSSPLICED} {RNA1509_35508} {RNA1310_44071.1} {RNA815_31229}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA