Data search


search
Exact
Search

Results for MligTC455_11086

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11086 41 0.86 Mlig455_000041

Neo: -

Age: -

Mlig455_000041 {REF} {Length: 412} {NoTransDecoderORF} {RNA1310_127333} {RNA815_549.1}

Cumulative graph for MligTC455_11086

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.466 1.115 0.99977 1.00000
RegionR2 3.489 1.115 0.09150 0.37101
RegionR3 -0.186 1.115 1.00000 1.00000
RegionR4 0.88 1.115 0.35076 0.67221
RegionR5 3.235 1.115 0.01763 0.08830
RegionR6 2.385 1.115 0.17463 0.73423
RegionR7 -1.063 1.115 0.99957 1.00000
RegionR8 -2.274 1.115 0.99954 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.447 1.115 0.99991 1.00000
RegenerationR2 2.742 1.115 0.01168 0.17590
RegenerationR3 5.394 1.115 0.00115 0.05502
RegenerationR4 1.564 1.115 0.23102 0.67967
RegenerationR5 0.407 1.115 0.66939 0.94048
RegenerationR6 2.297 1.115 0.10591 0.40348
RegenerationBL 1.61 1.115 0.56824 0.92204
RegenerationTP 5.225 1.115 0.04979 0.36583


Genes with expression patterns similar to MligTC455_11086

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11086 41 0.86 Mlig455_000041

Neo: -

Age: -

4 - 1.000 - 1.000 1.000 1.000 Mlig455_000041 {REF} {Length: 412} {NoTransDecoderORF} {RNA1310_127333} {RNA815_549.1}
2. MligTC455_28434 64 1.33 Mlig455_064695

Neo: -

Age: -

1.778 - - - - 0.802 0.976 Mlig455_064695 {REF} {Length: 2772} {TRANSSPLICED} {RNA1509_33160} {RNA1310_6176.2} {RNA815_7664}
3. MligTC455_40382 81 1.7 Mlig455_008892, Mlig455_016587

Neo: -

Age: Up-Down-Down

SVOP, SVOPL 1.755 - - - 0.794 0.961 -

Mlig455_008892 {REF} {Length: 4330} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=113.2]; Sugar (and other) transporter [PF00083.26, score=80.7]} {Human: ENSG00000166111, SVOP, SV2 related protein, [RH, Score=380, Expect=4e-125]; ENSG00000157703, SVOPL, SVOP like, [RH, Score=365, Expect=5e-120]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [RH, Score=368, Expect=2e-120]; ENSMUSG00000029830, Svopl, SV2 related protein homolog (rat)-like, [RH, Score=361, Expect=2e-118]} {Dmel: FBgn0034956, CG4324, [RH, Score=314, Expect=2e-100]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [RH, Score=364, Expect=2e-119]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [RH, Score=473, Expect=1e-162]} {RNA1509_26220} {RNA1310_11596.2} {RNA815_6500}

Mlig455_016587 {REF} {Length: 624} {Human: ENSG00000157703, SVOPL, SVOP like, [Score=51.6, Expect=5e-08]} {Mouse: ENSMUSG00000029830, Svopl, SV2 related protein homolog (rat)-like, [Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=69.3, Expect=1e-14]} {RNA1509_26220} {RNA1310_35696} {RNA815_6500}
4. MligTC455_22955 35 0.73 Mlig455_050160

Neo: -

Age: -

CYTH3 0.969 - - - - - 0.969 Mlig455_050160 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=164.8]; PH domain [PF00169.31, score=22.1]} {Human: ENSG00000008256, CYTH3, cytohesin 3, [Score=160, Expect=6e-46]; ENSG00000108669, CYTH1, cytohesin 1, [Score=157, Expect=6e-45]} {Mouse: ENSMUSG00000018001, Cyth3, cytohesin 3, [Score=160, Expect=3e-46]} {Dmel: FBgn0086779, step, steppke, [Score=161, Expect=2e-46]} {Celegans: WBGene00001743, grp-1, GTP exchange factor for ARFs 1, [Score=114, Expect=5e-29]} {Smed: dd_Smed_v6_9423_0_1, dd_Smed_v6_9423_0_1, [Score=79.7, Expect=1e-16]} {RNA1509_19472} {RNA1310_10460.1} {RNA815_3808.1}
5. MligTC455_34028 192 4 Mlig455_033258

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.028

0.969 - - - - 0.969 - Mlig455_033258 {REF} {Length: 1014} {NoTransDecoderORF} {RNA1509_42332} {RNA1310_38775, RNA1509_42332} {RNA1509_42332, RNA815_28320}
6. MligTC455_24576 14 0.3 Mlig455_023275

Neo: -

Age: -

0.961 - - - - - 0.961 Mlig455_023275 {REF} {Length: 131} {NoTransDecoderORF} {RNA1310_61184} {RNA815_34518}
7. MligTC455_23371 101 2.11 Mlig455_006907

Neo: -

Age: Down-Up-Down

Region-enriched R8: 3.403/0.01276

FSTL1 0.96 - - - - 0.960 - Mlig455_006907 {REF} {Length: 3700} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=60.0]; Immunoglobulin domain [PF13927.8, score=59.2]; Kazal-type serine protease inhibitor domain [PF07648.17, score=42.0]; Immunoglobulin domain [PF13895.8, score=33.6]; Immunoglobulin domain [PF00047.27, score=32.3]; Kazal-type serine protease inhibitor domain [PF00050.23, score=28.7]; Immunoglobulin V-set domain [PF07686.19, score=27.7]} {Human: ENSG00000163430, FSTL1, follistatin like 1, [RH, Score=68.9, Expect=3e-13]} {Mouse: ENSMUSG00000022816, Fstl1, follistatin-like 1, [RH, Score=68.2, Expect=6e-12]} {Celegans: WBGene00004256, pxn-1, Peroxidasin homolog, [Score=51.2, Expect=3e-06]} {RNA1509_41764} {RNA1310_9313, RNA1509_41764} {RNA1509_41764, RNA815_25649}
8. MligTC455_24659 47 0.98 Mlig455_007107, Mlig455_007145

Neo: -

Age: -

0.958 - - - - - 0.958

Mlig455_007107 {REF} {Length: 1708} {TRANSSPLICED} {RNA1310_43741} {RNA815_50621}

Mlig455_007145 {REF} {Length: 227} {NoTransDecoderORF} {RNA1310_45514} {RNA815_50907}
9. MligTC455_40955 159 3.31 Mlig455_042537, Mlig455_042539

Neo: -

Age: -

PTPDC1 0.954 - - - - 0.954 -

Mlig455_042537 {REF} {Length: 2360} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=49.6]; Protein-tyrosine phosphatase [PF00102.29, score=31.5]; Tyrosine phosphatase family [PF13350.8, score=19.1]} {Human: ENSG00000158079, PTPDC1, protein tyrosine phosphatase domain containing 1, [RH, Score=251, Expect=2e-74]} {Mouse: ENSMUSG00000038042, Ptpdc1, protein tyrosine phosphatase domain containing 1, [RH, Score=244, Expect=2e-72]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00020444, T12B3.1, [RH, Score=182, Expect=6e-52]} {Smed: dd_Smed_v6_13749_0_1, dd_Smed_v6_13749_0_1, [RH, Score=231, Expect=9e-70]} {RNA1509_39633} {RNA1310_7757.1, RNA1509_39633} {RNA1509_39633, RNA815_15362}

Mlig455_042539 {REF} {Length: 1221} {RNA1509_39633} {RNA1310_7757.1} {RNA815_21012.1}
10. MligTC455_38702 108 2.26 Mlig455_058108

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_058108 {REF} {Length: 4063} {Smed: dd_Smed_v6_17128_0_9, dd_Smed_v6_17128_0_9, [RH, Score=45.8, Expect=8e-08]} {RNA1509_55354} {RNA1310_40064, RNA1509_55354} {RNA1509_55354, RNA815_15195}
11. MligTC455_25483 620 12.92 Mlig455_020235

Neo: -

Age: logFC(26M/2M)=-0.339

Region-enriched R7: 2.631/0.00000

NAGS 0.95 - - - 0.950 - - Mlig455_020235 {REF} {Length: 2028} {Pfam: NAT, N-acetyltransferase, of N-acetylglutamate synthase [PF04768.15, score=139.1]} {Human: ENSG00000161653, NAGS, N-acetylglutamate synthase, [RH, Score=191, Expect=5e-54]} {Mouse: ENSMUSG00000048217, Nags, N-acetylglutamate synthase, [RH, Score=190, Expect=6e-54]} {Smed: dd_Smed_v6_9405_0_1, dd_Smed_v6_9405_0_1, [RH, Score=284, Expect=2e-90]} {RNA1509_13943} {RNA1310_12016, RNA1509_13943} {RNA1509_13943, RNA815_4247}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA