Data search


search
Exact
Search

Results for MligTC455_11610

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11610 119 2.49 Mlig455_001324

Neo: -

Age: -

Mlig455_001324 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_27526, RNA1509_45866} {RNA1310_21583, RNA1509_27526, RNA1509_45866} {RNA1509_27526, RNA1509_45866, RNA815_12355}

Cumulative graph for MligTC455_11610

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.365 2.071 0.40582 1.00000
RegionR2 2.047 2.071 0.07359 0.33120
RegionR3 1.686 2.071 0.07105 0.47143
RegionR4 0.304 2.071 0.74587 1.00000
RegionR5 -0.154 2.071 0.89920 1.00000
RegionR6 -0.163 2.071 0.90215 1.00000
RegionR7 -1.331 2.071 0.99573 1.00000
RegionR8 1.974 2.071 0.15530 0.71384

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.603 2.071 0.99995 1.00000
RegenerationR2 -0.026 2.071 0.97040 1.00000
RegenerationR3 -0.176 2.071 0.84511 0.99623
RegenerationR4 0.386 2.071 0.66596 0.94062
RegenerationR5 1.119 2.071 0.16336 0.58785
RegenerationR6 1.108 2.071 0.26010 0.60995
RegenerationBL 2.015 2.071 0.05748 0.27813
RegenerationTP 2.01 2.071 0.08895 0.46982


Genes with expression patterns similar to MligTC455_11610

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11610 119 2.49 Mlig455_001324

Neo: -

Age: -

5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_001324 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_27526, RNA1509_45866} {RNA1310_21583, RNA1509_27526, RNA1509_45866} {RNA1509_27526, RNA1509_45866, RNA815_12355}
2. MligTC455_22444 563 11.73 Mlig455_002477

Neo: -

Age: Up-Down-Down

0.97 - - - - - 0.970 Mlig455_002477 {REF} {Length: 4129} {Pfam: TIR domain [PF13676.8, score=78.3]; Domain of unknown function (DUF4441) [PF14536.8, score=21.3]; Subunit CCDC53 of WASH complex [PF10152.11, score=19.8]; Protein of unknown function (DUF775) [PF05603.14, score=19.2]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=159, Expect=1e-40]} {RNA1509_15248} {RNA1310_4628} {RNA815_1374}
3. MligTC455_25183 587 12.22 Mlig455_005102

Neo: -

Age: Down-Up-Down

Region-enriched R8: 2.221/0.00519

0.96 0.960 - - - - - Mlig455_005102 {REF} {Length: 3024} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.2]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_20466_0_2, dd_Smed_v6_20466_0_2, [Score=84.3, Expect=5e-17]} {RNA1509_9013} {RNA1310_7298} {RNA815_2337}
4. MligTC455_46277 170 3.55 Mlig455_027748

Neo: -

Age: Down-Up-Down

Region-enriched R8: 3.009/0.01168

0.955 0.955 - - - - - Mlig455_027748 {REF} {Length: 3176} {Pfam: SH3 domain [PF00018.30, score=25.1]} {RNA1509_53700} {RNA1310_6669, RNA1509_53700} {RNA1509_53700, RNA815_37465}
5. MligTC455_52109 297 6.19 Mlig455_069072

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.347

0.955 0.955 - - - - - Mlig455_069072 {REF} {Length: 2302} {RNA1509_46495} {RNA1310_32026} {RNA815_11216.2}
6. MligTC455_51358 183 3.81 Mlig455_064055

Neo: -

Age: -

0.952 0.952 - - - - - Mlig455_064055 {REF} {Length: 1393} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48446} {RNA1310_90226, RNA1509_48446} {RNA1509_48446, RNA815_47603}
7. MligTC455_28126 94 1.95 Mlig455_036970

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_036970 {REF} {Length: 3032} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA