TomoSeq data search

Data search

Results for MligTC455_28126

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28126

94

1.95

Mlig455_036970

Neo: -

Age: -

Mlig455_036970 {REF} {Length: 3032} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}

Cumulative graph for MligTC455_28126

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.043	1.694	0.99969	1.00000
RegionR2	1.109	1.694	0.40296	0.79682
RegionR3	1.179	1.694	0.36412	0.89889
RegionR4	-0.155	1.694	0.93383	1.00000
RegionR5	0.387	1.694	0.67796	1.00000
RegionR6	-1.136	1.694	0.96624	1.00000
RegionR7	2.123	1.694	0.20502	0.81530
RegionR8	-1.464	1.694	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.011	1.694	1.00000	1.00000
RegenerationR2	0.796	1.694	0.30243	0.74410
RegenerationR3	0.731	1.694	0.53083	0.87256
RegenerationR4	2.444	1.694	0.03339	0.29471
RegenerationR5	2.203	1.694	0.03696	0.31894
RegenerationR6	3.549	1.694	0.01226	0.13614
RegenerationBL	3.78	1.694	0.00651	0.07806
RegenerationTP	2.329	1.694	0.29379	0.73921

Genes with expression patterns similar to MligTC455_28126

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28126	94	1.95	Mlig455_036970	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_036970 {REF} {Length: 3032} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
2.	MligTC455_04377	197	4.1	Mlig455_060376	Neo: - Age: -		1.662	-	-	0.961	0.701	-	-	Mlig455_060376 {REF} {Length: 813} {NoTransDecoderORF} {RNA1310_51021} {RNA815_31361}
3.	MligTC455_37802	59	1.22	Mlig455_023156	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_023156 {REF} {Length: 1326} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.7]; Ankyrin repeats (many copies) [PF13637.8, score=19.5]} {RNA1509_46784} {RNA1310_1951.2} {RNA815_51293}
4.	MligTC455_28002	77	1.59	Mlig455_063768	Neo: - Age: Up-Down-Up	SIDT2	0.968	-	-	0.968	-	-	-	Mlig455_063768 {REF} {Length: 4153} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=678.2]; Ceramidase [PF05875.14, score=18.8]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [Score=530, Expect=2e-175]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=458, Expect=5e-148]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=294, Expect=3e-87]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [RH, Score=519, Expect=2e-172]} {RNA1509_19245} {RNA1310_3733} {RNA815_12922}
5.	MligTC455_42052	143	2.97	Mlig455_045281	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_045281 {REF} {Length: 968} {NoTransDecoderORF} {RNA1509_47923} {RNA1310_131032} {RNA815_16904}
6.	MligTC455_47590	22	0.46	Mlig455_017675, Mlig455_053765	Neo: - Age: -	LRRC74A	0.967	-	-	0.967	-	-	-	Mlig455_017675 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089} Mlig455_053765 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089}
7.	MligTC455_36120	75	1.55	Mlig455_071095	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_071095 {REF} {Length: 534} {NoTransDecoderORF} {RNA1310_64036} {RNA815_54380}
8.	MligTC455_21413	213	4.44	Mlig455_000595	Neo: - Age: Up-Down-Up	SCN5A	0.956	-	-	-	0.956	-	-	Mlig455_000595 {REF} {Length: 3395} {Pfam: Ion transport protein [PF00520.33, score=165.4]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [Score=270, Expect=3e-80]; ENSG00000136531, SCN2A, sodium voltage-gated channel alpha subunit 2, [Score=264, Expect=4e-81]; ENSG00000153253, SCN3A, sodium voltage-gated channel alpha subunit 3, [Score=264, Expect=1e-81]; ENSG00000144285, SCN1A, sodium voltage-gated channel alpha subunit 1, [Score=263, Expect=4e-78]; ENSG00000196876, SCN8A, sodium voltage-gated channel alpha subunit 8, [Score=260, Expect=2e-79]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=273, Expect=1e-81]; ENSMUSG00000057182, Scn3a, sodium channel, voltage-gated, type III, alpha, [Score=264, Expect=2e-78]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [Score=263, Expect=2e-80]; ENSMUSG00000075318, Scn2a, sodium channel, voltage-gated, type II, alpha, [Score=263, Expect=4e-78]; ENSMUSG00000064329, Scn1a, sodium channel, voltage-gated, type I, alpha, [Score=263, Expect=3e-78]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [Score=311, Expect=6e-104]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=128, Expect=5e-32]} {Smed: dd_Smed_v6_38612_0_1, dd_Smed_v6_38612_0_1, [Score=381, Expect=8e-128]} {RNA1509_48393} {RNA1310_85663} {RNA815_40227}
9.	MligTC455_21414	224	4.67	Mlig455_030334	Neo: - Age: -	PCDHA2	0.956	-	-	-	0.956	-	-	Mlig455_030334 {REF} {Length: 4598} {Pfam: Cadherin domain [PF00028.19, score=308.6]; Cadherin-like [PF16184.7, score=45.3]; Cadherin-like [PF08266.14, score=26.1]} {Human: ENSG00000204969, PCDHA2, protocadherin alpha 2, [RH, Score=296, Expect=4e-85]; ENSG00000249158, PCDHA11, protocadherin alpha 11, [RH, Score=282, Expect=3e-79]} {Mouse: ENSMUSG00000104148, Pcdha2, protocadherin alpha 2, [RH, Score=288, Expect=1e-81]; ENSMUSG00000103567, Pcdhga5, protocadherin gamma subfamily A, 5, [RH, Score=278, Expect=5e-78]; ENSMUSG00000051323, Pcdh19, protocadherin 19, [RH, Score=276, Expect=2e-76]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [RH, Score=276, Expect=3e-77]; ENSMUSG00000103310, Pcdha12, protocadherin alpha 12, [RH, Score=275, Expect=4e-77]; ENSMUSG00000103092, Pcdha5, protocadherin alpha 5, [RH, Score=275, Expect=4e-77]} {Dmel: FBgn0284247, ds, dachsous, [Score=254, Expect=2e-68]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=218, Expect=2e-57]} {Smed: dd_Smed_v6_14117_0_1, dd_Smed_v6_14117_0_1, [RH, Score=438, Expect=4e-135]} {RNA1509_48393} {RNA1310_9367} {RNA815_33153}
10.	MligTC455_30282	79	1.64	Mlig455_028986	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_028986 {REF} {Length: 2481} {Celegans: WBGene00022511, ZC53.4, [Score=80.1, Expect=3e-18]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=126, Expect=2e-36]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}
11.	MligTC455_16342	20	0.42	Mlig455_012507	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_012507 {REF} {Length: 1825} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=61.0]} {Smed: dd_Smed_v6_14020_0_1, dd_Smed_v6_14020_0_1, [RH, Score=132, Expect=2e-38]} {RNA1509_23873} {RNA1310_73480} {RNA815_38079}
12.	MligTC455_11610	119	2.49	Mlig455_001324	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_001324 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_27526, RNA1509_45866} {RNA1310_21583, RNA1509_27526, RNA1509_45866} {RNA1509_27526, RNA1509_45866, RNA815_12355}

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