Data search
Results for MligTC455_11714
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_11714 | 44 | 0.92 | Mlig455_053084 | Neo: - Age: Down-Up-Up |
Mlig455_053084 {REF} {Length: 1095} {RNA1310_30524} {RNA815_15425} |
Cumulative graph for MligTC455_11714
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.07 | 1.288 | 0.99959 | 1.00000 | |
| RegionR2 | 4.368 | 1.288 | 0.01646 | 0.13621 | |
| RegionR3 | 2.132 | 1.288 | 0.17988 | 0.71026 | |
| RegionR4 | -1.265 | 1.288 | 0.95869 | 1.00000 | |
| RegionR5 | 0.86 | 1.288 | 0.52395 | 0.88698 | |
| RegionR6 | 2.018 | 1.288 | 0.22191 | 0.80225 | |
| RegionR7 | 1.582 | 1.288 | 0.39217 | 1.00000 | |
| RegionR8 | -2.625 | 1.288 | 0.99948 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.04 | 1.288 | 0.99978 | 1.00000 | |
| RegenerationR2 | -1.003 | 1.288 | 0.52132 | 0.87941 | |
| RegenerationR3 | 1.355 | 1.288 | 0.35335 | 0.77268 | |
| RegenerationR4 | 3.309 | 1.288 | 0.03683 | 0.30985 | |
| RegenerationR5 | 0.915 | 1.288 | 0.50125 | 0.85912 | |
| RegenerationR6 | 2.233 | 1.288 | 0.11885 | 0.42388 | |
| RegenerationBL | 2.172 | 1.288 | 0.32818 | 0.69457 | |
| RegenerationTP | 3.107 | 1.288 | 0.25940 | 0.70717 |
Genes with expression patterns similar to MligTC455_11714
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_11714 | 44 | 0.92 | Mlig455_053084 | Neo: - Age: Down-Up-Up |
4 | 1.000 | 1.000 | - | 1.000 | 1.000 | - | Mlig455_053084 {REF} {Length: 1095} {RNA1310_30524} {RNA815_15425} | |
| 2. | MligTC455_16018 | 105 | 2.19 | Mlig455_037178 | Neo: - Age: Down-Up-Up Region-enriched R3: 2.953/0.03214 |
0.979 | - | - | - | - | 0.979 | - | Mlig455_037178 {REF} {Length: 2768} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=28.6]; FSIP1 family [PF15554.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=19.6]} {RNA1509_43934} {RNA1310_20406} {RNA815_9981} | |
| 3. | MligTC455_21505 | 219 | 4.57 | Mlig455_004243, Mlig455_063139 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.566/0.02847 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_004243 {REF} {Length: 3420} {Pfam: Replication protein A OB domain [PF16900.7, score=34.4]; OB-fold nucleic acid binding domain [PF01336.27, score=20.7]} {RNA1509_42291} {RNA1310_16322} {RNA815_63367} Mlig455_063139 {REF} {Length: 2398} {TRANSSPLICED} {Pfam: Replication protein A OB domain [PF16900.7, score=26.7]} {RNA1509_42291} {RNA1310_16322, RNA1509_42291} {RNA1509_42291, RNA815_63367} |
|
| 4. | MligTC455_42070 | 27 | 0.56 | Mlig455_055361 | Neo: - Age: Up-Down-Up |
0.964 | - | - | - | 0.964 | - | - | Mlig455_055361 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=29.7]} {RNA1509_11465} {RNA1310_15579.1} {RNA815_20172} | |
| 5. | MligTC455_29569 | 458 | 9.53 | Mlig455_034168, Mlig455_040379 | Neo: - |
TRAF3 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_034168 {REF} {Length: 2313} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=30.0]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=259, Expect=8e-81]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=270, Expect=2e-84]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=128, Expect=4e-32]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=112, Expect=9e-27]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [RH, Score=178, Expect=1e-50]} {RNA1509_37811} {RNA1310_11544} {RNA815_4083.1} Mlig455_040379 {REF} {Length: 3163} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=18.8]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=303, Expect=2e-95]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=301, Expect=4e-95]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=101, Expect=7e-23]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [RH, Score=185, Expect=4e-52]} {RNA1509_37811} {RNA1310_15068.1, RNA1509_37811} {RNA1509_37811, RNA815_4083.1} |