TomoSeq data search

Data search

Results for MligTC455_11740

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11740	17	0.35	Mlig455_009787	Neo: - Age: -	PAK1	Mlig455_009787 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=238.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=163.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Fungal protein kinase [PF17667.3, score=23.3]; Kinase-like [PF14531.8, score=21.6]} {Human: ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=355, Expect=1e-115]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=352, Expect=6e-115]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=354, Expect=1e-115]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=354, Expect=1e-115]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=358, Expect=2e-115]} {Celegans: WBGene00003911, pak-1, Serine/threonine-protein kinase pak-1, [Score=342, Expect=3e-111]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=365, Expect=2e-121]} {RNA1509_1400, RNA1509_46956, RNA1509_59653} {RNA1310_9743.1, RNA1509_46956, RNA1509_59653} {RNA1509_46956, RNA1509_59653, RNA815_6116}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11740

0.35

Mlig455_009787

Neo: -

Age: -

PAK1

Mlig455_009787 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=238.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=163.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Fungal protein kinase [PF17667.3, score=23.3]; Kinase-like [PF14531.8, score=21.6]} {Human: ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=355, Expect=1e-115]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=352, Expect=6e-115]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=354, Expect=1e-115]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=354, Expect=1e-115]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=358, Expect=2e-115]} {Celegans: WBGene00003911, pak-1, Serine/threonine-protein kinase pak-1, [Score=342, Expect=3e-111]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=365, Expect=2e-121]} {RNA1509_1400, RNA1509_46956, RNA1509_59653} {RNA1310_9743.1, RNA1509_46956, RNA1509_59653} {RNA1509_46956, RNA1509_59653, RNA815_6116}

Cumulative graph for MligTC455_11740

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.88	0.795	0.99980	1.00000
RegionR2	-1.795	0.795	0.99978	1.00000
RegionR3	-1.079	0.795	0.99980	1.00000
RegionR4	0.549	0.795	0.57863	0.89539
RegionR5	2.557	0.795	0.02502	0.11368
RegionR6	-1.043	0.795	0.99982	1.00000
RegionR7	3.035	0.795	0.05401	0.44768
RegionR8	-1.344	0.795	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.232	0.795	1.00000	1.00000
RegenerationR2	3.254	0.795	0.02739	0.27347
RegenerationR3	2.836	0.795	0.12148	0.54038
RegenerationR4	2.543	0.795	0.14765	0.57480
RegenerationR5	-0.946	0.795	0.45211	0.83199
RegenerationR6	3.038	0.795	0.13078	0.44423
RegenerationBL	-1.44	0.795	0.99986	1.00000
RegenerationTP	-2.147	0.795	0.99984	1.00000

Genes with expression patterns similar to MligTC455_11740

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11740	17	0.35	Mlig455_009787	Neo: - Age: -	PAK1	1	-	-	-	1.000	-	-	Mlig455_009787 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=238.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=163.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Fungal protein kinase [PF17667.3, score=23.3]; Kinase-like [PF14531.8, score=21.6]} {Human: ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=355, Expect=1e-115]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=352, Expect=6e-115]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=354, Expect=1e-115]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=354, Expect=1e-115]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=358, Expect=2e-115]} {Celegans: WBGene00003911, pak-1, Serine/threonine-protein kinase pak-1, [Score=342, Expect=3e-111]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=365, Expect=2e-121]} {RNA1509_1400, RNA1509_46956, RNA1509_59653} {RNA1310_9743.1, RNA1509_46956, RNA1509_59653} {RNA1509_46956, RNA1509_59653, RNA815_6116}
2.	MligTC455_21967	46	0.96	Mlig455_059500	Neo: - Age: logFC(26M/2M)=-0.481		0.965	-	-	-	0.965	-	-	Mlig455_059500 {REF} {Length: 3977} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.4]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=53.5, Expect=6e-07]} {Smed: dd_Smed_v6_23771_0_1, dd_Smed_v6_23771_0_1, [RH, Score=382, Expect=8e-125]} {RNA1509_57431} {RNA1310_11500} {RNA815_5893}
3.	MligTC455_25669	64	1.33	Mlig455_002924	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.152		0.961	-	-	-	0.961	-	-	Mlig455_002924 {REF} {Length: 2532} {RNA1509_57755} {RNA1310_35856.1} {RNA815_19086}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts