Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_25669 | 64 | 1.33 | Mlig455_002924 | Neo: - |
Mlig455_002924 {REF} {Length: 2532} {RNA1509_57755} {RNA1310_35856.1} {RNA815_19086} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.591 | 1.744 | 0.99971 | 1.00000 | |
RegionR2 | 0.902 | 1.744 | 0.48230 | 0.86596 | |
RegionR3 | 2.593 | 1.744 | 0.01665 | 0.21115 | |
RegionR4 | 2.345 | 1.744 | 0.06309 | 0.22576 | |
RegionR5 | 1.245 | 1.744 | 0.28102 | 0.60944 | |
RegionR6 | -1.74 | 1.744 | 0.98291 | 1.00000 | |
RegionR7 | 0.195 | 1.744 | 0.76018 | 1.00000 | |
RegionR8 | -2.95 | 1.744 | 0.99956 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.326 | 1.744 | 0.99997 | 1.00000 | |
RegenerationR2 | 1.537 | 1.744 | 0.07038 | 0.43081 | |
RegenerationR3 | -0.313 | 1.744 | 0.71739 | 0.95404 | |
RegenerationR4 | 0.051 | 1.744 | 0.96279 | 1.00000 | |
RegenerationR5 | 0.22 | 1.744 | 0.79479 | 0.98731 | |
RegenerationR6 | 2.8 | 1.744 | 0.05355 | 0.28989 | |
RegenerationBL | 1.833 | 1.744 | 0.37303 | 0.74134 | |
RegenerationTP | 3.741 | 1.744 | 0.06325 | 0.40738 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_25669 | 64 | 1.33 | Mlig455_002924 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002924 {REF} {Length: 2532} {RNA1509_57755} {RNA1310_35856.1} {RNA815_19086} | |
2. | MligTC455_21967 | 46 | 0.96 | Mlig455_059500 | Neo: - Age: logFC(26M/2M)=-0.481 |
1.837 | - | - | - | 0.976 | - | 0.861 | Mlig455_059500 {REF} {Length: 3977} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.4]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=53.5, Expect=6e-07]} {Smed: dd_Smed_v6_23771_0_1, dd_Smed_v6_23771_0_1, [RH, Score=382, Expect=8e-125]} {RNA1509_57431} {RNA1310_11500} {RNA815_5893} | |
3. | MligTC455_07706 | 27 | 0.57 | Mlig455_001501, Mlig455_001519 | Neo: - Age: - |
DCX | 0.973 | - | - | - | 0.973 | - | - | Mlig455_001501 {REF} {Length: 1767} {Pfam: Doublecortin [PF03607.19, score=129.0]} {Human: ENSG00000077279, DCX, doublecortin, [RH, Score=194, Expect=3e-58]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [RH, Score=196, Expect=5e-59]} {Dmel: FBgn0261387, CG17528, [Score=160, Expect=3e-43]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=159, Expect=3e-43]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=94.0, Expect=7e-21]} Mlig455_001519 {REF} {Length: 1525} {Pfam: Doublecortin [PF03607.19, score=127.4]} {Human: ENSG00000077279, DCX, doublecortin, [Score=168, Expect=4e-49]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=7e-50]} {Dmel: FBgn0261387, CG17528, [Score=127, Expect=1e-32]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=134, Expect=3e-35]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=49.3, Expect=1e-06]} |
4. | MligTC455_28344 | 63 | 1.32 | Mlig455_043590 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_043590 {REF} {Length: 676} {NoTransDecoderORF} {RNA1509_51983} {RNA1310_29347} {RNA815_21467} | |
5. | MligTC455_15187 | 713 | 14.85 | Mlig455_042720, Mlig455_042822 | Neo: - Age: - Region-enriched R7: 3.051/0.00000 Regeneration-downregulated BL: -2.302 Regeneration-depleted BL: -2.302 |
FOXRED2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_042720 {REF} {Length: 2916} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=161.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=51.9]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=28.5]; FAD dependent oxidoreductase [PF01266.26, score=27.7]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=27.5]; HI0933-like protein [PF03486.16, score=25.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.9]; FAD binding domain [PF01494.21, score=20.5]; Flavin-binding monooxygenase-like [PF00743.21, score=19.9]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=490, Expect=2e-165]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=475, Expect=9e-160]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=473, Expect=4e-160]} {RNA1509_14772} {RNA1310_8010, RNA1509_14772} {RNA1509_14772, RNA815_3364.1} Mlig455_042822 {REF} {Length: 2921} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=137.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=46.8]; FAD dependent oxidoreductase [PF01266.26, score=31.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=31.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=29.2]; HI0933-like protein [PF03486.16, score=26.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=25.6]; FAD binding domain [PF01494.21, score=23.2]; Flavin-binding monooxygenase-like [PF00743.21, score=21.0]; FAD-NAD(P)-binding [PF13454.8, score=18.8]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [Score=276, Expect=3e-87]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [Score=263, Expect=2e-82]} {Smed: dd_Smed_v6_12138_0_2, dd_Smed_v6_12138_0_2, [Score=268, Expect=2e-86]} {RNA1509_14772} {RNA1310_8010} {RNA815_3364.1} |
6. | MligTC455_11740 | 17 | 0.35 | Mlig455_009787 | Neo: - Age: - |
PAK1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_009787 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=238.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=163.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Fungal protein kinase [PF17667.3, score=23.3]; Kinase-like [PF14531.8, score=21.6]} {Human: ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=355, Expect=1e-115]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=352, Expect=6e-115]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=357, Expect=2e-116]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=354, Expect=1e-115]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=354, Expect=1e-115]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=358, Expect=2e-115]} {Celegans: WBGene00003911, pak-1, Serine/threonine-protein kinase pak-1, [Score=342, Expect=3e-111]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=365, Expect=2e-121]} {RNA1509_1400, RNA1509_46956, RNA1509_59653} {RNA1310_9743.1, RNA1509_46956, RNA1509_59653} {RNA1509_46956, RNA1509_59653, RNA815_6116} |
7. | MligTC455_49740 | 410 | 8.53 | Mlig455_044468 | Neo: - Age: Up-Down-Down |
0.961 | - | - | - | - | - | 0.961 | Mlig455_044468 {REF} {Length: 2899} {RNA1509_28731} {RNA1310_58210} {RNA815_32262} | |
8. | MligTC455_43517 | 225 | 4.68 | Mlig455_046220 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_046220 {REF} {Length: 2469} {RNA1509_36953} {RNA1310_25066.1} {RNA815_14953.1} | |
9. | MligTC455_36314 | 152 | 3.16 | Mlig455_011466 | Neo: - Age: Up-Down-Up |
GLB1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_011466 {REF} {Length: 3532} {Pfam: Glycosyl hydrolases family 35 [PF01301.21, score=373.0]; Beta-galactosidase [PF02449.17, score=41.9]; Beta-galactosidase jelly roll domain [PF13364.8, score=37.0]} {Human: ENSG00000170266, GLB1, galactosidase beta 1, [RH, Score=503, Expect=6e-170]} {Mouse: ENSMUSG00000045594, Glb1, galactosidase, beta 1, [RH, Score=511, Expect=2e-173]} {Dmel: FBgn0260746, Ect3, Ectoderm-expressed 3, [RH, Score=426, Expect=1e-140]} {Celegans: WBGene00011832, bgal-1, Beta-galactosidase, [RH, Score=395, Expect=1e-128]} {Smed: dd_Smed_v6_4056_0_1, dd_Smed_v6_4056_0_1, [RH, Score=527, Expect=4e-180]} {RNA1509_9543} {RNA1310_10090.1} {RNA815_3183} |
10. | MligTC455_39745 | 367 | 7.65 | Mlig455_019269 | Neo: - Age: Down-Up-Down |
DUT | 0.955 | - | - | - | - | - | 0.955 | Mlig455_019269 {REF} {Length: 8301} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=88.1]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=85.1, Expect=1e-18]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=83.2, Expect=6e-18]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=71.2, Expect=6e-13]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=77.0, Expect=1e-16]} {RNA1509_22708} {RNA1310_2613.1, RNA1509_22708} {RNA1509_22708, RNA815_19666} |
11. | MligTC455_49739 | 830 | 17.3 | Mlig455_044422, Mlig455_044457 | Neo: - Age: - Region-enriched R8: 2.666/0.03976 |
TTN | 0.955 | - | - | - | - | - | 0.955 | Mlig455_044422 {REF} {Length: 5565} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=194.3]; Immunoglobulin domain [PF13927.8, score=115.7]; Immunoglobulin domain [PF00047.27, score=80.0]; Immunoglobulin domain [PF13895.8, score=78.6]; Immunoglobulin V-set domain [PF07686.19, score=37.3]} {Human: ENSG00000155657, TTN, titin, [Score=89.7, Expect=5e-17]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0086906, sls, sallimus, [Score=289, Expect=3e-78]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_2928_0_1, dd_Smed_v6_2928_0_1, [Score=468, Expect=4e-146]} {RNA1509_19101} {RNA1310_4824.1} {RNA815_8416} Mlig455_044457 {REF} {Length: 5680} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=194.2]; Immunoglobulin domain [PF13927.8, score=115.6]; Immunoglobulin domain [PF00047.27, score=79.7]; Immunoglobulin domain [PF13895.8, score=76.8]; Immunoglobulin V-set domain [PF07686.19, score=37.6]} {Human: ENSG00000155657, TTN, titin, [Score=99.0, Expect=7e-20]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=92.4, Expect=4e-18]} {Dmel: FBgn0086906, sls, sallimus, [Score=292, Expect=3e-79]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=233, Expect=2e-61]} {Smed: dd_Smed_v6_2928_0_1, dd_Smed_v6_2928_0_1, [Score=464, Expect=1e-144]} {RNA1509_19101} {RNA1310_4824.1} {RNA815_8416} |
12. | MligTC455_09158 | 14 | 0.29 | Mlig455_034949 | Neo: - Age: - |
SCNN1B | 0.954 | - | - | - | 0.954 | - | - | Mlig455_034949 {REF} {Length: 2620} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=209.2]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=71.6, Expect=2e-12]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=73.2, Expect=5e-13]; ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=72.4, Expect=9e-13]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=95.9, Expect=1e-20]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=124, Expect=2e-29]} {RNA1310_71131} |
13. | MligTC455_11225 | 8 | 0.16 | Mlig455_029436 | Neo: - Age: - |
SLC22A6 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_029436 {REF} {Length: 1897} {Pfam: Sugar (and other) transporter [PF00083.26, score=104.0]; Major Facilitator Superfamily [PF07690.18, score=56.0]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=188, Expect=2e-52]; ENSG00000137204, SLC22A7, solute carrier family 22 member 7, [Score=187, Expect=7e-52]} {Mouse: ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=188, Expect=1e-52]; ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=185, Expect=2e-51]} {Dmel: FBgn0034479, CG8654, [Score=184, Expect=1e-51]} {Celegans: WBGene00022348, Y82E9BR.16, [Score=167, Expect=8e-45]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=154, Expect=1e-40]} {RNA1310_93768} |
14. | MligTC455_28499 | 9 | 0.19 | Mlig455_062318 | Neo: - Age: - |
TP53I11 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_062318 {REF} {Length: 1675} {Pfam: Tumour protein p53-inducible protein 11 [PF14936.8, score=126.0]} {Human: ENSG00000175274, TP53I11, tumor protein p53 inducible protein 11, [RH, Score=104, Expect=6e-28]} {Mouse: ENSMUSG00000068735, Trp53i11, transformation related protein 53 inducible protein 11, [RH, Score=102, Expect=8e-27]} {Celegans: WBGene00021185, Y9C12A.1, [RH, Score=81.3, Expect=2e-18]} {RNA1509_32988} {RNA1310_50901} {RNA815_42442} |
15. | MligTC455_33906 | 7 | 0.15 | Mlig455_006059 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_006059 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_3572} {RNA1310_144349} |