M. lignano Tomo-Seq
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Results for MligTC455_12143

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12143 124 2.59 Mlig455_035428, Mlig455_061081

Neo: -

Age: -

Mlig455_035428 {REF} {Length: 758} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251}

Mlig455_061081 {REF} {Length: 968} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251}

Cumulative graph for MligTC455_12143

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.374 2.451 0.99970 1.00000
RegionR2 2.149 2.451 0.17341 0.52044
RegionR3 2.992 2.451 0.00611 0.10901
RegionR4 1.802 2.451 0.24391 0.54188
RegionR5 2.365 2.451 0.03006 0.12972
RegionR6 2.653 2.451 0.02655 0.29883
RegionR7 -3.791 2.451 0.99980 1.00000
RegionR8 -3.795 2.451 0.99984 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.092 2.451 0.99978 1.00000
RegenerationR2 2.164 2.451 0.06116 0.40630
RegenerationR3 3.135 2.451 0.00152 0.06425
RegenerationR4 1.987 2.451 0.09451 0.47889
RegenerationR5 1.393 2.451 0.08441 0.44825
RegenerationR6 2.026 2.451 0.04375 0.26160
RegenerationBL 6.281 2.451 0.00230 0.03967
RegenerationTP 1.957 2.451 0.99984 1.00000


Genes with expression patterns similar to MligTC455_12143

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12143 124 2.59 Mlig455_035428, Mlig455_061081

Neo: -

Age: -

 5 1.000 1.000 - 1.000 1.000 1.000

Mlig455_035428 {REF} {Length: 758} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251}

Mlig455_061081 {REF} {Length: 968} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251}
2. MligTC455_46536 8 0.16 Mlig455_045085

Neo: -

Age: -

 0.986 - - - 0.986 - - Mlig455_045085 {REF} {Length: 1426} {NoTransDecoderORF} {RNA1509_26167} {RNA1310_51086} {RNA815_55096}
3. MligTC455_52035 5 0.11 Mlig455_054094

Neo: -

Age: Up-Down-Down

 FAM161A 0.956 - - - - 0.956 - Mlig455_054094 {REF} {Length: 2612} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=140.7]} {Human: ENSG00000170264, FAM161A, FAM161A, centrosomal protein, [RH, Score=80.1, Expect=6e-15]} {Mouse: ENSMUSG00000049811, Fam161a, family with sequence similarity 161, member A, [Score=67.8, Expect=3e-11]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [RH, Score=194, Expect=2e-52]} {RNA1509_10896} {RNA1310_9692.1} {RNA815_784}
4. MligTC455_43537 11 0.22 Mlig455_016079

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_016079 {REF} {Length: 2163} {NoTransDecoderORF} {RNA1509_17743} {RNA1310_79099} {RNA815_42668}
5. MligTC455_27202 272 5.68 Mlig455_033974, Mlig455_056726

Neo: -

Age: Down-Up-Up

Region-enriched R4: 3.815/0.00502

 ACTG1 0.95 - - - 0.950 - -

Mlig455_033974 {REF} {Length: 1811} {Pfam: Actin [PF00022.21, score=480.6]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=707, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=707, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000063, act-1, Actin-1, [Score=710, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}

Mlig455_056726 {REF} {Length: 1589} {Pfam: Actin [PF00022.21, score=483.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=712, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=709, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=712, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=709, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000043, Act42A, Actin 42A, [Score=711, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}

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