TomoSeq data search

Data search

Results for MligTC455_27202

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27202	272	5.68	Mlig455_033974, Mlig455_056726	Neo: - Age: Down-Up-Up Region-enriched R4: 3.815/0.00502	ACTG1	Mlig455_033974 {REF} {Length: 1811} {Pfam: Actin [PF00022.21, score=480.6]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=707, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=707, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000063, act-1, Actin-1, [Score=710, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3} Mlig455_056726 {REF} {Length: 1589} {Pfam: Actin [PF00022.21, score=483.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=712, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=709, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=712, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=709, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000043, Act42A, Actin 42A, [Score=711, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27202

272

5.68

Mlig455_033974, Mlig455_056726

Neo: -

Age: Down-Up-Up

Region-enriched R4: 3.815/0.00502

ACTG1

Mlig455_033974 {REF} {Length: 1811} {Pfam: Actin [PF00022.21, score=480.6]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=707, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=707, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000063, act-1, Actin-1, [Score=710, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}

Mlig455_056726 {REF} {Length: 1589} {Pfam: Actin [PF00022.21, score=483.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=712, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=709, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=712, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=709, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000043, Act42A, Actin 42A, [Score=711, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}

Cumulative graph for MligTC455_27202

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.522	3.172	1.00000	1.00000
RegionR2	0.249	3.172	0.67770	1.00000
RegionR3	0.495	3.172	0.57961	1.00000
RegionR4	3.815	3.172	0.00040	0.00502
RegionR5	0.659	3.172	0.51313	0.87643
RegionR6	1.412	3.172	0.18497	0.75047
RegionR7	0.45	3.172	0.63645	1.00000
RegionR8	-4.557	3.172	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.007	3.172	0.99984	1.00000
RegenerationR2	0.294	3.172	0.62640	0.92562
RegenerationR3	1.85	3.172	0.01154	0.19601
RegenerationR4	-0.099	3.172	0.87093	1.00000
RegenerationR5	0.161	3.172	0.81007	0.99142
RegenerationR6	-0.788	3.172	0.27643	0.62538
RegenerationBL	2.38	3.172	0.07030	0.30870
RegenerationTP	3.408	3.172	0.05004	0.36720

Genes with expression patterns similar to MligTC455_27202

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27202	272	5.68	Mlig455_033974, Mlig455_056726	Neo: - Age: Down-Up-Up Region-enriched R4: 3.815/0.00502	ACTG1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033974 {REF} {Length: 1811} {Pfam: Actin [PF00022.21, score=480.6]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=707, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=707, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000063, act-1, Actin-1, [Score=710, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3} Mlig455_056726 {REF} {Length: 1589} {Pfam: Actin [PF00022.21, score=483.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=712, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=709, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=712, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=709, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=691, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=690, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=690, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=689, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000043, Act42A, Actin 42A, [Score=711, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=701, Expect=0.0]} {RNA1509_12157} {RNA1310_20267.2} {RNA815_4929.3}
2.	MligTC455_38317	262	5.46	Mlig455_026174, Mlig455_026186, Mlig455_026201	Neo: - Age: - Region-enriched R4: 3.311/0.04100	ZC3H10	0.977	-	-	-	0.977	-	-	Mlig455_026174 {REF} {Length: 2148} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=36.5]; Zinc finger domain [PF18345.3, score=22.6]; CCCH-type zinc finger [PF18044.3, score=20.0]; Zinc-finger containing family [PF15663.7, score=18.7]} {Human: ENSG00000135482, ZC3H10, zinc finger CCCH-type containing 10, [RH, Score=127, Expect=2e-32]} {Mouse: ENSMUSG00000039810, Zc3h10, zinc finger CCCH type containing 10, [RH, Score=127, Expect=1e-32]} {Celegans: WBGene00021816, Y53G8AR.9, [RH, Score=85.9, Expect=1e-18]} {Smed: dd_Smed_v6_7175_0_1, dd_Smed_v6_7175_0_1, [RH, Score=115, Expect=5e-28]} {RNA1509_31861} {RNA1310_21240} {RNA815_8785.2} Mlig455_026186 {REF} {Length: 2362} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=34.3]; Zinc finger domain [PF18345.3, score=22.6]; CCCH-type zinc finger [PF18044.3, score=20.0]} {Human: ENSG00000135482, ZC3H10, zinc finger CCCH-type containing 10, [RH, Score=127, Expect=2e-32]} {Mouse: ENSMUSG00000039810, Zc3h10, zinc finger CCCH type containing 10, [RH, Score=127, Expect=2e-32]} {Celegans: WBGene00021816, Y53G8AR.9, [RH, Score=85.5, Expect=1e-18]} {Smed: dd_Smed_v6_7175_0_1, dd_Smed_v6_7175_0_1, [RH, Score=115, Expect=3e-28]} {RNA1509_31861} {RNA1310_21240, RNA1509_31861} {RNA1509_31861, RNA815_8785.2} Mlig455_026201 {REF} {Length: 2052} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=37.0]; Zinc finger domain [PF18345.3, score=23.2]; CCCH-type zinc finger [PF18044.3, score=20.7]; Torus domain [PF16131.7, score=19.7]; Zinc-finger containing family [PF15663.7, score=19.4]} {Human: ENSG00000135482, ZC3H10, zinc finger CCCH-type containing 10, [RH, Score=149, Expect=7e-41]} {Mouse: ENSMUSG00000039810, Zc3h10, zinc finger CCCH type containing 10, [RH, Score=142, Expect=2e-38]} {Celegans: WBGene00021816, Y53G8AR.9, [RH, Score=85.5, Expect=8e-19]} {Smed: dd_Smed_v6_7175_0_1, dd_Smed_v6_7175_0_1, [RH, Score=116, Expect=1e-28]} {RNA1509_31861} {RNA1310_21240} {RNA815_8785.1}
3.	MligTC455_34544	22	0.47	Mlig455_029406	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_029406 {REF} {Length: 2118} {RNA1509_49846} {RNA1310_39189} {RNA815_32261}
4.	MligTC455_22527	180	3.75	Mlig455_016486	Neo: - Age: logFC(26M/2M)=3.591 Region-enriched R3: 4.421/0.00282		0.952	-	-	-	0.952	-	-	Mlig455_016486 {REF} {Length: 1533} {TRANSSPLICED} {Pfam: Haemolymph juvenile hormone binding protein (JHBP) [PF06585.13, score=150.8]} {Dmel: FBgn0038395, CG10407, [RH, Score=86.7, Expect=5e-19]} {Smed: dd_Smed_v6_888_0_1, dd_Smed_v6_888_0_1, [Score=90.1, Expect=2e-20]} {RNA1509_13349} {RNA1310_21535.1} {RNA815_6279.1}
5.	MligTC455_12143	124	2.59	Mlig455_035428, Mlig455_061081	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_035428 {REF} {Length: 758} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251} Mlig455_061081 {REF} {Length: 968} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52043} {RNA1310_71947} {RNA815_63251}