TomoSeq data search

Data search

Results for MligTC455_12144

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12144	296	6.18	Mlig455_020300, Mlig455_020357	Neo: - Age: -		Mlig455_020300 {REF} {Length: 1436} {RNA1310_11315} {RNA815_39851} Mlig455_020357 {REF} {Length: 1334} {RNA1310_11315} {RNA815_39851}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_12144

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.9	3.147	0.59427	1.00000
RegionR2	-0.321	3.147	0.59919	0.95004
RegionR3	-0.233	3.147	0.63659	1.00000
RegionR4	0.972	3.147	0.11088	0.32937
RegionR5	-1.745	3.147	0.00179	0.01608
RegionR6	0.375	3.147	0.44185	1.00000
RegionR7	-0.557	3.147	0.44985	1.00000
RegionR8	0.61	3.147	0.45157	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.892	3.147	0.15412	0.89645
RegenerationR2	-0.786	3.147	0.09995	0.50046
RegenerationR3	-0.717	3.147	0.19011	0.62532
RegenerationR4	-0.519	3.147	0.35324	0.78270
RegenerationR5	0.019	3.147	0.97087	1.00000
RegenerationR6	-0.903	3.147	0.08893	0.37209
RegenerationBL	0.126	3.147	0.84087	1.00000
RegenerationTP	-0.918	3.147	0.25132	0.69859

Genes with expression patterns similar to MligTC455_12144

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12144	296	6.18	Mlig455_020300, Mlig455_020357	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020300 {REF} {Length: 1436} {RNA1310_11315} {RNA815_39851} Mlig455_020357 {REF} {Length: 1334} {RNA1310_11315} {RNA815_39851}
2.	MligTC455_27545	130	2.71	Mlig455_042355	Neo: - Age: logFC(26M/2M)=-0.989	KREMEN1	1.816	-	-	0.951	-	-	0.865	Mlig455_042355 {REF} {Length: 5033} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=63.6]; Ankyrin repeats (many copies) [PF13637.8, score=52.3]; WSC domain [PF01822.21, score=42.5]; Ankyrin repeat [PF13606.8, score=38.6]; Ankyrin repeat [PF00023.32, score=30.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.9]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=50.1, Expect=3e-07]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=52.8, Expect=6e-08]} {RNA1509_48795} {RNA1310_1739} {RNA815_2547.1}
3.	MligTC455_31047	265	5.53	Mlig455_016720	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_016720 {REF} {Length: 449} {RNA1509_13348} {RNA1310_46678} {RNA815_21464}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_12144

296

6.18

Mlig455_020300, Mlig455_020357

Neo: -

Age: -

1.000

Mlig455_020300 {REF} {Length: 1436} {RNA1310_11315} {RNA815_39851}

Mlig455_020357 {REF} {Length: 1334} {RNA1310_11315} {RNA815_39851}

MligTC455_27545

130

2.71

Mlig455_042355

Neo: -

Age: logFC(26M/2M)=-0.989

KREMEN1

1.816

0.951

0.865

Mlig455_042355 {REF} {Length: 5033} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=63.6]; Ankyrin repeats (many copies) [PF13637.8, score=52.3]; WSC domain [PF01822.21, score=42.5]; Ankyrin repeat [PF13606.8, score=38.6]; Ankyrin repeat [PF00023.32, score=30.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.9]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=50.1, Expect=3e-07]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=52.8, Expect=6e-08]} {RNA1509_48795} {RNA1310_1739} {RNA815_2547.1}

MligTC455_31047

265

5.53

Mlig455_016720

Neo: -

Age: -

0.957

Mlig455_016720 {REF} {Length: 449} {RNA1509_13348} {RNA1310_46678} {RNA815_21464}