Data search
Results for MligTC455_12161
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12161 | 8 | 0.16 | Mlig455_055447 | Neo: - Age: - |
Mlig455_055447 {REF} {Length: 907} {RNA1310_61913} |
Cumulative graph for MligTC455_12161
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_12161
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12161 | 8 | 0.16 | Mlig455_055447 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_055447 {REF} {Length: 907} {RNA1310_61913} | |
| 2. | MligTC455_18876 | 179 | 3.73 | Mlig455_030924 | Neo: - |
SLC18B1 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_030924 {REF} {Length: 2054} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=152.2]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=206, Expect=2e-60]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=206, Expect=1e-60]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=232, Expect=1e-70]} {Smed: dd_Smed_v6_5294_0_1, dd_Smed_v6_5294_0_1, [RH, Score=105, Expect=2e-24]} {RNA1509_9855} {RNA1310_13054.1} {RNA815_4605} |
| 3. | MligTC455_24214 | 86 | 1.78 | Mlig455_031438 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_031438 {REF} {Length: 2355} {RNA1509_15660} {RNA1310_6657.1} {RNA815_2791.1} | |
| 4. | MligTC455_11189 | 90 | 1.88 | Mlig455_053930 | Neo: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_053930 {REF} {Length: 1400} {RNA1509_16583, RNA1509_269, RNA1509_27774, RNA1509_57624} {RNA1310_15377.1, RNA1509_16583, RNA1509_27774, RNA1509_57624} {RNA1509_16583, RNA1509_27774, RNA1509_57624, RNA815_2813.1} | |
| 5. | MligTC455_53222 | 78 | 1.63 | Mlig455_048985, Mlig455_049001 | Neo: - Age: - Region-enriched R5: 4.090/0.01265 |
0.963 | - | - | - | - | - | 0.963 | Mlig455_048985 {REF} {Length: 3401} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_5372} {RNA1310_83.1} {RNA815_40.1} Mlig455_049001 {REF} {Length: 3256} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_5372} {RNA1310_87213} {RNA815_40.1} |
|
| 6. | MligTC455_18811 | 24 | 0.49 | Mlig455_004218 | Neo: - Age: - Regeneration-upregulated R5: 7.624 Regeneration-enriched R5: 7.624 |
GRIK4 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_004218 {REF} {Length: 2840} {Pfam: Ligand-gated ion channel [PF00060.28, score=81.7]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=49.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=47.5]; Receptor family ligand binding region [PF01094.30, score=26.9]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=156, Expect=1e-38]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=155, Expect=2e-38]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=155, Expect=2e-38]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=155, Expect=1e-38]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=154, Expect=4e-38]} {Dmel: FBgn0038837, CG3822, [Score=150, Expect=5e-37]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=158, Expect=1e-39]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=249, Expect=7e-75]} {RNA1310_86873} |
| 7. | MligTC455_19054 | 28 | 0.58 | Mlig455_064777 | Neo: Irradiation Age: - Region-enriched R5: 4.032/0.03004 Regeneration-enriched BL: 7.271 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_064777 {REF} {Length: 1621} {RNA1509_58118} {RNA1310_23414, RNA1509_58118} {RNA1509_58118, RNA815_34383} | |
| 8. | MligTC455_22678 | 311 | 6.49 | Mlig455_020944 | Neo: Irradiation Age: logFC(26M/2M)=0.263 Region-enriched R5: 5.543/0.00000 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_020944 {REF} {Length: 4341} {RNA1509_50172} {RNA1310_4808} {RNA815_7567.1} | |
| 9. | MligTC455_32982 | 874 | 18.2 | Mlig455_049353 | Neo: Int S/G2/M Age: Down-Up-Up Region-specific R5: 2.632 Region-enriched R5: 2.506/0.00000 |
H2AFX | 0.95 | - | - | - | - | - | 0.950 | Mlig455_049353 {REF} {Length: 1228} {Pfam: C-terminus of histone H2A [PF16211.7, score=72.2]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=57.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=24.7]} {Human: ENSG00000188486, H2AFX, H2A histone family member X, [Score=231, Expect=4e-79]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [Score=224, Expect=2e-76]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [Score=224, Expect=2e-76]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [Score=224, Expect=2e-76]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [Score=224, Expect=2e-76]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [Score=224, Expect=1e-76]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [Score=224, Expect=2e-76]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [Score=224, Expect=9e-77]; ENSG00000282988, AL031777.3, novel protein, [Score=224, Expect=3e-76]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [Score=223, Expect=3e-76]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [Score=223, Expect=4e-76]; ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [Score=223, Expect=2e-76]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [Score=222, Expect=1e-75]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [Score=222, Expect=1e-75]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [Score=222, Expect=7e-76]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [Score=222, Expect=7e-76]; ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [Score=222, Expect=8e-76]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [Score=222, Expect=1e-75]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [Score=221, Expect=2e-75]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [Score=221, Expect=2e-75]; ENSG00000246705, H2AFJ, H2A histone family member J, [Score=221, Expect=1e-75]} {Mouse: ENSMUSG00000049932, H2afx, H2A histone family, member X, [Score=231, Expect=4e-79]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [Score=223, Expect=4e-76]; ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [Score=223, Expect=2e-76]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [Score=222, Expect=5e-76]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [Score=222, Expect=5e-76]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [Score=222, Expect=5e-76]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [Score=222, Expect=5e-76]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [Score=222, Expect=5e-76]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [Score=222, Expect=5e-76]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [Score=222, Expect=7e-76]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [Score=222, Expect=8e-76]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [Score=222, Expect=5e-76]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [Score=222, Expect=7e-76]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [Score=222, Expect=5e-76]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [Score=222, Expect=5e-76]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [Score=222, Expect=5e-76]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [Score=222, Expect=5e-76]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [Score=221, Expect=2e-75]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [Score=221, Expect=2e-75]} {Dmel: FBgn0053814, His2A:CG33814, [Score=206, Expect=5e-70]} {Celegans: WBGene00001890, his-16, Histone H2A, [Score=202, Expect=3e-68]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [Score=223, Expect=1e-76]} {RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415} {RNA1310_20333.1, RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415} {RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415, RNA815_12044.1} |
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