Data search
Results for MligTC455_12233
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12233 | 20 | 0.41 | Mlig455_033251 | Neo: - Age: - Region-enriched R1: 13.368/0.00104 |
Mlig455_033251 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_46540} {RNA815_11764.1} |
Cumulative graph for MligTC455_12233
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 13.368 | 0.587 | 0.00000 | 0.00104 | |
| RegionR2 | -2.789 | 0.587 | 1.00000 | 1.00000 | |
| RegionR3 | -3.631 | 0.587 | 1.00000 | 1.00000 | |
| RegionR4 | 6.471 | 0.587 | 0.00001 | 0.00014 | |
| RegionR5 | -1.056 | 0.587 | 1.00000 | 1.00000 | |
| RegionR6 | -4.018 | 0.587 | 1.00000 | 1.00000 | |
| RegionR7 | -4.249 | 0.587 | 0.99981 | 1.00000 | |
| RegionR8 | -4.096 | 0.587 | 0.99981 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -10.503 | 0.587 | 0.00021 | 0.08195 | |
| RegenerationR2 | -1.201 | 0.587 | 0.99983 | 1.00000 | |
| RegenerationR3 | -1.065 | 0.587 | 1.00000 | 1.00000 | |
| RegenerationR4 | -3.285 | 0.587 | 0.00024 | 0.01322 | |
| RegenerationR5 | -1.947 | 0.587 | 0.00078 | 0.04625 | |
| RegenerationR6 | 2.39 | 0.587 | 0.00130 | 0.04020 | |
| RegenerationBL | 2.499 | 0.587 | 0.99994 | 1.00000 | |
| RegenerationTP | -1.687 | 0.587 | 0.99992 | 1.00000 |
Genes with expression patterns similar to MligTC455_12233
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12233 | 20 | 0.41 | Mlig455_033251 | Neo: - Age: - Region-enriched R1: 13.368/0.00104 |
1 | - | - | - | 1.000 | - | - | Mlig455_033251 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_46540} {RNA815_11764.1} | |
| 2. | MligTC455_14361 | 30 | 0.62 | Mlig455_018338 | Neo: Irradiation Age: Up-Down-Up |
1 | - | - | - | 1.000 | - | - | Mlig455_018338 {REF} {Length: 2514} {Pfam: Galactosyltransferase [PF01762.23, score=19.2]} {RNA1509_39518} {RNA1310_47457} {RNA815_35070} | |
| 3. | MligTC455_22237 | 221 | 4.61 | Mlig455_070913 | Neo: Germline Age: Up-Down-Down Region-specific R4: 5.580 |
FER1L5 | 0.993 | - | - | - | 0.993 | - | - | Mlig455_070913 {REF} {Length: 8054} {Pfam: Ferlin C-terminus [PF16165.7, score=69.7]; C2 domain [PF00168.32, score=66.1]; FerB (NUC096) domain [PF08150.14, score=36.4]} {Human: ENSG00000249715, FER1L5, fer-1 like family member 5, [Score=239, Expect=2e-62]} {Mouse: ENSMUSG00000048612, Myof, myoferlin, [Score=222, Expect=2e-57]; ENSMUSG00000037432, Fer1l5, fer-1-like 5 (C. elegans), [Score=219, Expect=2e-56]; ENSMUSG00000033788, Dysf, dysferlin, [Score=216, Expect=1e-55]} {Dmel: FBgn0266757, mfr, misfire, [Score=131, Expect=9e-31]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=129, Expect=2e-29]} {Smed: dd_Smed_v6_6816_0_2, dd_Smed_v6_6816_0_2, [Score=263, Expect=2e-70]} {RNA1509_3551, RNA1509_36414} {RNA1310_272.1, RNA1509_3551, RNA1509_36414} {RNA1509_3551, RNA1509_36414, RNA815_260} |
| 4. | MligTC455_38176 | 42 | 0.87 | Mlig455_006838, Mlig455_036675, Mlig455_055100, Mlig455_055101, Mlig455_055148 | Neo: - Age: - |
0.983 | - | - | - | 0.983 | - | - | Mlig455_006838 {REF} {Length: 5446} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1} Mlig455_036675 {REF} {Length: 386} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25556} {RNA1310_121678} {RNA815_7048} Mlig455_055100 {REF} {Length: 1454} {Pfam: Tudor domain [PF00567.26, score=23.0]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1} Mlig455_055101 {REF} {Length: 979} {NoTransDecoderORF} {RNA1509_41000} {RNA1310_28354} {RNA815_7056.1} Mlig455_055148 {REF} {Length: 509} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_38502} |
|
| 5. | MligTC455_11880 | 216 | 4.5 | Mlig455_014659 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.372 |
SLC6A7 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_014659 {REF} {Length: 2638} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=663.0]} {Human: ENSG00000011083, SLC6A7, solute carrier family 6 member 7, [RH, Score=536, Expect=0.0]} {Mouse: ENSMUSG00000052026, Slc6a7, solute carrier family 6 (neurotransmitter transporter, L-proline), member 7, [RH, Score=537, Expect=0.0]} {Dmel: FBgn0034136, DAT, Dopamine transporter, [Score=489, Expect=1e-165]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=452, Expect=7e-152]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_24331, RNA1509_5246} {RNA1310_23971.1, RNA1509_24331, RNA1509_5246} {RNA1509_24331, RNA1509_5246, RNA815_3710.1} |
| 6. | MligTC455_37299 | 18 | 0.37 | Mlig455_064096 | Neo: - Age: - |
0.971 | - | - | - | 0.971 | - | - | Mlig455_064096 {REF} {Length: 2004} {RNA1509_17085, RNA1509_26852, RNA1509_32701} {RNA1310_33260, RNA1509_17085, RNA1509_26852, RNA1509_32701} {RNA1509_17085, RNA1509_26852, RNA1509_32701, RNA815_22090} | |
| 7. | MligTC455_52747 | 11 | 0.22 | Mlig455_063096 | Neo: - Age: Up-Up-Down |
SNTB1 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_063096 {REF} {Length: 3494} {Pfam: PDZ domain [PF00595.26, score=69.1]; PH domain [PF18012.3, score=53.5]; PH domain [PF00169.31, score=38.9]; PDZ domain [PF17820.3, score=25.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.5]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [Score=320, Expect=6e-103]; ENSG00000168807, SNTB2, syntrophin beta 2, [Score=319, Expect=2e-102]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [Score=318, Expect=2e-102]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [Score=310, Expect=4e-99]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=278, Expect=4e-86]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [Score=154, Expect=2e-41]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [RH, Score=377, Expect=5e-126]} {RNA1509_18297, RNA1509_45869} {RNA1310_10457, RNA1509_45869} {RNA1509_45869, RNA815_5015} |
| 8. | MligTC455_33806 | 93 | 1.94 | Mlig455_009560 | Neo: - Age: Up-Down-Up Region-enriched R6: 5.229/0.00001 |
MOXD1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_009560 {REF} {Length: 2463} {Pfam: Copper type II ascorbate-dependent monooxygenase, N-terminal domain [PF01082.22, score=94.2]; Copper type II ascorbate-dependent monooxygenase, C-terminal domain [PF03712.17, score=54.5]} {Human: ENSG00000079931, MOXD1, monooxygenase DBH like 1, [Score=110, Expect=1e-24]} {Mouse: ENSMUSG00000020000, Moxd1, monooxygenase, DBH-like 1, [Score=115, Expect=1e-26]} {Dmel: FBgn0010329, Tbh, Tyramine beta hydroxylase, [Score=124, Expect=2e-29]} {Celegans: WBGene00006541, tbh-1, Tyramine beta-hydroxylase, [Score=134, Expect=6e-33]} {Smed: dd_Smed_v6_42610_0_1, dd_Smed_v6_42610_0_1, [Score=115, Expect=6e-28]} {RNA1509_32991} {RNA1310_25882} {RNA815_12058} |
| 9. | MligTC455_17481 | 478 | 9.97 | Mlig455_069261 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 6.324 Region-enriched R4: 4.882/0.00000 Regeneration-downregulated R4: -3.060 Regeneration-depleted R4: -3.060 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_069261 {REF} {Length: 663} {RNA1509_17544} {RNA1310_55616.2, RNA1509_17544} {RNA1509_17544, RNA815_27925} |
Berezikov Lab - 2020-2021 © ERIBA