Data search


search
Exact
Search

Results for MligTC455_38176

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38176 42 0.87 Mlig455_006838, Mlig455_036675, Mlig455_055100, Mlig455_055101, Mlig455_055148

Neo: -

Age: -

Mlig455_006838 {REF} {Length: 5446} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1}

Mlig455_036675 {REF} {Length: 386} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25556} {RNA1310_121678} {RNA815_7048}

Mlig455_055100 {REF} {Length: 1454} {Pfam: Tudor domain [PF00567.26, score=23.0]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1}

Mlig455_055101 {REF} {Length: 979} {NoTransDecoderORF} {RNA1509_41000} {RNA1310_28354} {RNA815_7056.1}

Mlig455_055148 {REF} {Length: 509} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_38502}

Cumulative graph for MligTC455_38176

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.361 1.383 0.99978 1.00000
RegionR2 1.06 1.383 0.62910 0.97036
RegionR3 2.094 1.383 0.17346 0.69976
RegionR4 -2.556 1.383 0.99479 1.00000
RegionR5 0.423 1.383 0.64760 0.99953
RegionR6 0.805 1.383 0.58801 1.00000
RegionR7 2.803 1.383 0.15614 0.73038
RegionR8 -1.267 1.383 0.99986 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.917 1.383 0.99997 1.00000
RegenerationR2 2.309 1.383 0.11605 0.52977
RegenerationR3 0.742 1.383 0.63434 0.92223
RegenerationR4 4.313 1.383 0.02673 0.26279
RegenerationR5 1.062 1.383 0.46998 0.84194
RegenerationR6 2.615 1.383 0.08898 0.37213
RegenerationBL -1.257 1.383 0.96457 1.00000
RegenerationTP -2.168 1.383 0.99967 1.00000


Genes with expression patterns similar to MligTC455_38176

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38176 42 0.87 Mlig455_006838, Mlig455_036675, Mlig455_055100, Mlig455_055101, Mlig455_055148

Neo: -

Age: -

4 - 1.000 - 1.000 1.000 1.000

Mlig455_006838 {REF} {Length: 5446} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1}

Mlig455_036675 {REF} {Length: 386} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25556} {RNA1310_121678} {RNA815_7048}

Mlig455_055100 {REF} {Length: 1454} {Pfam: Tudor domain [PF00567.26, score=23.0]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_7056.1}

Mlig455_055101 {REF} {Length: 979} {NoTransDecoderORF} {RNA1509_41000} {RNA1310_28354} {RNA815_7056.1}

Mlig455_055148 {REF} {Length: 509} {Pfam: Tudor domain [PF00567.26, score=22.8]} {RNA1509_41000} {RNA1310_10951.1} {RNA815_38502}
2. MligTC455_22237 221 4.61 Mlig455_070913

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.580

FER1L5 1.881 - - - 0.969 - 0.912 Mlig455_070913 {REF} {Length: 8054} {Pfam: Ferlin C-terminus [PF16165.7, score=69.7]; C2 domain [PF00168.32, score=66.1]; FerB (NUC096) domain [PF08150.14, score=36.4]} {Human: ENSG00000249715, FER1L5, fer-1 like family member 5, [Score=239, Expect=2e-62]} {Mouse: ENSMUSG00000048612, Myof, myoferlin, [Score=222, Expect=2e-57]; ENSMUSG00000037432, Fer1l5, fer-1-like 5 (C. elegans), [Score=219, Expect=2e-56]; ENSMUSG00000033788, Dysf, dysferlin, [Score=216, Expect=1e-55]} {Dmel: FBgn0266757, mfr, misfire, [Score=131, Expect=9e-31]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=129, Expect=2e-29]} {Smed: dd_Smed_v6_6816_0_2, dd_Smed_v6_6816_0_2, [Score=263, Expect=2e-70]} {RNA1509_3551, RNA1509_36414} {RNA1310_272.1, RNA1509_3551, RNA1509_36414} {RNA1509_3551, RNA1509_36414, RNA815_260}
3. MligTC455_50208 65 1.35 Mlig455_059575

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.579/0.00264

NPY1R 1.753 - - - 0.783 - 0.970 Mlig455_059575 {REF} {Length: 4214} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=116.4]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=105, Expect=6e-24]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=109, Expect=1e-25]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=113, Expect=1e-26]} {Celegans: WBGene00008278, npr-10, NeuroPeptide Receptor family, [Score=89.7, Expect=3e-19]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [Score=191, Expect=7e-54]} {RNA1509_59439} {RNA1310_40278} {RNA815_24823}
4. MligTC455_08694 292 6.09 Mlig455_032078

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.518

Region-specific R4: 6.586

Region-enriched R4: 3.284/0.00840

ACRV1 1.706 - - - 0.755 - 0.951 Mlig455_032078 {REF} {Length: 2413} {Human: ENSG00000134940, ACRV1, acrosomal vesicle protein 1, [RH, Score=67.4, Expect=1e-11]} {RNA1509_29677} {RNA1310_11498.1} {RNA815_6478.1}
5. MligTC455_21089 42 0.88 Mlig455_026122, Mlig455_026181

Neo: Germline

Age: -

1.698 - - - - 0.715 0.983

Mlig455_026122 {REF} {Length: 2112} {NoTransDecoderORF} {RNA1310_66824.2} {RNA815_20087}

Mlig455_026181 {REF} {Length: 1533} {NoTransDecoderORF} {RNA1310_136548}
6. MligTC455_12233 20 0.41 Mlig455_033251

Neo: -

Age: -

Region-enriched R1: 13.368/0.00104
Region-enriched R4: 6.471/0.00014

0.983 - - - 0.983 - - Mlig455_033251 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_46540} {RNA815_11764.1}
7. MligTC455_14361 30 0.62 Mlig455_018338

Neo: Irradiation

Age: Up-Down-Up

0.983 - - - 0.983 - - Mlig455_018338 {REF} {Length: 2514} {Pfam: Galactosyltransferase [PF01762.23, score=19.2]} {RNA1509_39518} {RNA1310_47457} {RNA815_35070}
8. MligTC455_38807 27 0.56 Mlig455_040236, Mlig455_050654, Mlig455_058203

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.714

0.979 - - - - - 0.979

Mlig455_040236 {REF} {Length: 443} {Pfam: Integrase zinc binding domain [PF17921.3, score=30.4]} {RNA1509_37828} {RNA1310_2927} {RNA815_3168.1}

Mlig455_050654 {REF} {Length: 4214} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=83.8]; Integrase zinc binding domain [PF17921.3, score=64.9]; Integrase core domain [PF00665.28, score=46.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=116, Expect=4e-27]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_058203 {REF} {Length: 1011} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=87.3]; Integrase zinc binding domain [PF17921.3, score=66.0]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=118, Expect=2e-30]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}
9. MligTC455_25944 80 1.67 Mlig455_019326, Mlig455_019441

Neo: -

Age: Down-Up-Down

MX2 0.977 - - - - - 0.977

Mlig455_019326 {REF} {Length: 2842} {Pfam: Dynamin central region [PF01031.22, score=135.3]; Dynamin family [PF00350.25, score=134.3]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Dynamin GTPase effector domain [PF02212.20, score=27.7]; Ferrous iron transport protein B [PF02421.20, score=22.3]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=302, Expect=6e-92]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=299, Expect=3e-91]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=290, Expect=5e-88]} {Dmel: FBgn0003392, shi, shibire, [Score=163, Expect=8e-42]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=166, Expect=6e-43]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=164, Expect=3e-42]} {RNA1509_17853} {RNA1310_5329.2} {RNA815_1588.1}

Mlig455_019441 {REF} {Length: 2736} {Pfam: Dynamin family [PF00350.25, score=134.3]; Dynamin central region [PF01031.22, score=80.0]; 50S ribosome-binding GTPase [PF01926.25, score=28.1]; Ferrous iron transport protein B [PF02421.20, score=22.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=248, Expect=7e-72]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=247, Expect=4e-72]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=236, Expect=2e-68]} {Dmel: FBgn0003392, shi, shibire, [Score=142, Expect=5e-35]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=149, Expect=4e-37]} {Smed: dd_Smed_v6_6863_0_3, dd_Smed_v6_6863_0_3, [Score=147, Expect=1e-36]} {RNA1509_17853} {RNA1310_5329.2} {RNA815_1588.1}
10. MligTC455_52747 11 0.22 Mlig455_063096

Neo: -

Age: Up-Up-Down

SNTB1 0.97 - - - 0.970 - - Mlig455_063096 {REF} {Length: 3494} {Pfam: PDZ domain [PF00595.26, score=69.1]; PH domain [PF18012.3, score=53.5]; PH domain [PF00169.31, score=38.9]; PDZ domain [PF17820.3, score=25.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.5]} {Human: ENSG00000172164, SNTB1, syntrophin beta 1, [Score=320, Expect=6e-103]; ENSG00000168807, SNTB2, syntrophin beta 2, [Score=319, Expect=2e-102]} {Mouse: ENSMUSG00000041308, Sntb2, syntrophin, basic 2, [Score=318, Expect=2e-102]; ENSMUSG00000060429, Sntb1, syntrophin, basic 1, [Score=310, Expect=4e-99]} {Dmel: FBgn0037130, Syn1, Syntrophin-like 1, [Score=278, Expect=4e-86]} {Celegans: WBGene00006062, stn-1, Syntrophin-1, [Score=154, Expect=2e-41]} {Smed: dd_Smed_v6_7105_0_1, dd_Smed_v6_7105_0_1, [RH, Score=377, Expect=5e-126]} {RNA1509_18297, RNA1509_45869} {RNA1310_10457, RNA1509_45869} {RNA1509_45869, RNA815_5015}
11. MligTC455_41625 27 0.55 Mlig455_004793

Neo: -

Age: -

Regeneration-upregulated R2: 7.202

Regeneration-enriched R2: 7.202

0.961 - - - - 0.961 - Mlig455_004793 {REF} {Length: 975} {NoTransDecoderORF} {RNA1310_83747} {RNA815_39967}
12. MligTC455_35688 139 2.89 Mlig455_038910

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_038910 {REF} {Length: 2619} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.1, RNA1509_23775} {RNA1509_23775, RNA815_5748.1}
13. MligTC455_16474 22 0.45 Mlig455_025196, Mlig455_029879

Neo: -

Age: -

Region-enriched R4: 6.273/0.01003

0.956 - - - - - 0.956

Mlig455_025196 {REF} {Length: 729} {RNA1509_23706} {RNA1310_77009} {RNA815_30456.1}

Mlig455_029879 {REF} {Length: 729} {RNA1509_23706} {RNA1310_77009} {RNA815_30456.1}
14. MligTC455_28155 103 2.14 Mlig455_020882

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_020882 {REF} {Length: 980}
15. MligTC455_39205 14 0.28 Mlig455_020814

Neo: -

Age: -

0.954 - - - - - 0.954 Mlig455_020814 {REF} {Length: 640} {RNA1509_42238} {RNA1310_15237.1} {RNA815_33632}
16. MligTC455_44067 62 1.29 Mlig455_022545, Mlig455_022585

Neo: -

Age: -

THRA, THRB 0.953 - - - - 0.953 -

Mlig455_022545 {REF} {Length: 4795} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=105.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=64.8]} {Human: ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=169, Expect=2e-44]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=172, Expect=1e-45]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [RH, Score=175, Expect=5e-45]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [Score=108, Expect=7e-25]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=200, Expect=6e-54]} {RNA1509_27629} {RNA1310_74061} {RNA815_54074}

Mlig455_022585 {REF} {Length: 3179} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=68.1]} {Human: ENSG00000151090, THRB, thyroid hormone receptor beta, [Score=120, Expect=1e-30]; ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=120, Expect=6e-31]; ENSG00000131759, RARA, retinoic acid receptor alpha, [Score=114, Expect=6e-29]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=120, Expect=4e-31]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=120, Expect=1e-30]} {Dmel: FBgn0004865, Eip78C, Ecdysone-induced protein 78C, [Score=62.4, Expect=9e-11]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=86.3, Expect=8e-19]} {RNA1310_74061} {RNA815_54074}
17. MligTC455_18327 195 4.06 Mlig455_023862

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.296

Region-enriched R4: 1.814/0.02492

ANO7 0.951 - - - - - 0.951 Mlig455_023862 {REF} {Length: 4455} {Pfam: Calcium-activated chloride channel [PF04547.14, score=439.7]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=207.9]; Uncharacterized conserved protein (DUF2280) [PF10045.11, score=25.4]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=617, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=612, Expect=0.0]} {Dmel: FBgn0038721, subdued, [Score=493, Expect=2e-155]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=198, Expect=3e-52]} {Smed: dd_Smed_v6_5046_0_1, dd_Smed_v6_5046_0_1, [Score=712, Expect=0.0]} {RNA1509_8525} {RNA1310_4253.1} {RNA815_8513}
18. MligTC455_37175 13 0.26 Mlig455_011884

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_011884 {REF} {Length: 941} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
19. MligTC455_06149 22 0.46 Mlig455_007542

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_007542 {REF} {Length: 664} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_130712}
20. MligTC455_30091 42 0.88 Mlig455_041359

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.463

HK1 0.95 - - - 0.950 - - Mlig455_041359 {REF} {Length: 3047} {Pfam: Hexokinase [PF03727.18, score=236.5]; Hexokinase [PF00349.23, score=182.4]} {Human: ENSG00000156515, HK1, hexokinase 1, [Score=316, Expect=5e-98]; ENSG00000156510, HKDC1, hexokinase domain containing 1, [Score=315, Expect=2e-97]} {Mouse: ENSMUSG00000020080, Hkdc1, hexokinase domain containing 1, [Score=319, Expect=3e-99]; ENSMUSG00000037012, Hk1, hexokinase 1, [Score=314, Expect=3e-97]} {Dmel: FBgn0001186, Hex-A, Hexokinase A, [RH, Score=345, Expect=2e-113]} {Celegans: WBGene00008780, hxk-1, Phosphotransferase, [Score=330, Expect=2e-108]} {Smed: dd_Smed_v6_4327_0_1, dd_Smed_v6_4327_0_1, [Score=299, Expect=1e-96]} {RNA1509_6851} {RNA1310_17801} {RNA815_4267}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA