TomoSeq data search

Data search

Results for MligTC455_12319

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12319	119	2.48	Mlig455_020524	Neo: - Age: -		Mlig455_020524 {REF} {Length: 2500} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.2]} {RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1310_4941, RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1509_1085, RNA1509_43377, RNA1509_47166, RNA815_252.5}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_12319

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.5	1.898	1.00000	1.00000
RegionR2	0.02	1.898	0.77218	1.00000
RegionR3	0.753	1.898	0.52499	1.00000
RegionR4	3.114	1.898	0.03262	0.14407
RegionR5	0.983	1.898	0.43367	0.79379
RegionR6	0.338	1.898	0.67533	1.00000
RegionR7	1.561	1.898	0.30016	0.93495
RegionR8	-3.269	1.898	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.535	1.898	0.44110	1.00000
RegenerationR2	-0.024	1.898	0.97819	1.00000
RegenerationR3	-1.504	1.898	0.17518	0.61064
RegenerationR4	-0.776	1.898	0.46637	0.85106
RegenerationR5	-0.117	1.898	0.92890	1.00000
RegenerationR6	1.442	1.898	0.22962	0.57560
RegenerationBL	1.411	1.898	0.41831	0.78695
RegenerationTP	2.881	1.898	0.15996	0.58814

Genes with expression patterns similar to MligTC455_12319

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12319	119	2.48	Mlig455_020524	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_020524 {REF} {Length: 2500} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.2]} {RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1310_4941, RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1509_1085, RNA1509_43377, RNA1509_47166, RNA815_252.5}
2.	MligTC455_31726	371	7.74	Mlig455_018621	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.461	QKI	0.967	-	-	-	-	-	0.967	Mlig455_018621 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Homodimerisation region of STAR domain protein [PF16544.7, score=72.3]} {Human: ENSG00000112531, QKI, QKI, KH domain containing RNA binding, [RH, Score=257, Expect=9e-82]} {Mouse: ENSMUSG00000062078, Qk, quaking, [RH, Score=257, Expect=6e-82]} {Dmel: FBgn0264491, how, held out wings, [Score=241, Expect=2e-75]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=231, Expect=5e-72]} {Smed: dd_Smed_v6_13063_0_1, dd_Smed_v6_13063_0_1, [Score=248, Expect=4e-78]} {RNA1509_45751, RNA1509_57462} {RNA1310_16506.1, RNA1509_45751} {RNA1509_45751, RNA815_14597}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_12319

119

2.48

Mlig455_020524

Neo: -

Age: -

1.000

MligTC455_31726

371

7.74

Mlig455_018621

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.461

QKI

0.967

Mlig455_018621 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Homodimerisation region of STAR domain protein [PF16544.7, score=72.3]} {Human: ENSG00000112531, QKI, QKI, KH domain containing RNA binding, [RH, Score=257, Expect=9e-82]} {Mouse: ENSMUSG00000062078, Qk, quaking, [RH, Score=257, Expect=6e-82]} {Dmel: FBgn0264491, how, held out wings, [Score=241, Expect=2e-75]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=231, Expect=5e-72]} {Smed: dd_Smed_v6_13063_0_1, dd_Smed_v6_13063_0_1, [Score=248, Expect=4e-78]} {RNA1509_45751, RNA1509_57462} {RNA1310_16506.1, RNA1509_45751} {RNA1509_45751, RNA815_14597}