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Results for MligTC455_31726

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31726 371 7.74 Mlig455_018621

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.461

 QKI Mlig455_018621 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Homodimerisation region of STAR domain protein [PF16544.7, score=72.3]} {Human: ENSG00000112531, QKI, QKI, KH domain containing RNA binding, [RH, Score=257, Expect=9e-82]} {Mouse: ENSMUSG00000062078, Qk, quaking, [RH, Score=257, Expect=6e-82]} {Dmel: FBgn0264491, how, held out wings, [Score=241, Expect=2e-75]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=231, Expect=5e-72]} {Smed: dd_Smed_v6_13063_0_1, dd_Smed_v6_13063_0_1, [Score=248, Expect=4e-78]} {RNA1509_45751, RNA1509_57462} {RNA1310_16506.1, RNA1509_45751} {RNA1509_45751, RNA815_14597}

Cumulative graph for MligTC455_31726

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.812 3.123 0.12354 0.71763
RegionR2 -1.063 3.123 0.15729 0.49587
RegionR3 -0.484 3.123 0.42337 0.94563
RegionR4 -0.547 3.123 0.45101 0.78002
RegionR5 -0.712 3.123 0.20559 0.49908
RegionR6 -0.303 3.123 0.60740 1.00000
RegionR7 0.766 3.123 0.23610 0.86042
RegionR8 0.53 3.123 0.48525 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.711 3.123 0.12452 0.85517
RegenerationR2 0.496 3.123 0.48167 0.86406
RegenerationR3 0.122 3.123 0.86610 1.00000
RegenerationR4 0.21 3.123 0.78095 0.98080
RegenerationR5 0.599 3.123 0.38460 0.78876
RegenerationR6 1.197 3.123 0.09568 0.38457
RegenerationBL 0.502 3.123 0.49974 0.86482
RegenerationTP 0.07 3.123 0.92397 1.00000


Genes with expression patterns similar to MligTC455_31726

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31726 371 7.74 Mlig455_018621

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.461

 QKI 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_018621 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Homodimerisation region of STAR domain protein [PF16544.7, score=72.3]} {Human: ENSG00000112531, QKI, QKI, KH domain containing RNA binding, [RH, Score=257, Expect=9e-82]} {Mouse: ENSMUSG00000062078, Qk, quaking, [RH, Score=257, Expect=6e-82]} {Dmel: FBgn0264491, how, held out wings, [Score=241, Expect=2e-75]} {Celegans: WBGene00006423, asd-2, RNA-binding protein asd-2, [Score=231, Expect=5e-72]} {Smed: dd_Smed_v6_13063_0_1, dd_Smed_v6_13063_0_1, [Score=248, Expect=4e-78]} {RNA1509_45751, RNA1509_57462} {RNA1310_16506.1, RNA1509_45751} {RNA1509_45751, RNA815_14597}
2. MligTC455_12319 119 2.48 Mlig455_020524

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_020524 {REF} {Length: 2500} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.2]} {RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1310_4941, RNA1509_1085, RNA1509_43377, RNA1509_47166} {RNA1509_1085, RNA1509_43377, RNA1509_47166, RNA815_252.5}
3. MligTC455_03563 760 15.83 Mlig455_025786

Neo: Int S/G2/M

Age: -

 POLR2B 0.961 - - - 0.961 - - Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
4. MligTC455_20744 340 7.08 Mlig455_030472

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_030472 {REF} {Length: 1379} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_18800} {RNA815_24990}
5. MligTC455_27347 208457 4342.84 Mlig455_029731, Mlig455_029733, Mlig455_029734, Mlig455_034875, Mlig455_034878, Mlig455_034891

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.046

Region-enriched R8: 1.565/0.01423
Region-enriched R7: 1.401/0.02656

 0.952 - - - - - 0.952

Mlig455_029731 {REF} {Length: 691} {RNA1509_25} {RNA1310_29531} {RNA815_10152.2}

Mlig455_029733 {REF} {Length: 585} {RNA1509_25} {RNA1310_29531} {RNA815_10152.2}

Mlig455_029734 {REF} {Length: 691} {RNA1509_25} {RNA1310_29531} {RNA815_10152.1}

Mlig455_034875 {REF} {Length: 807} {RNA1509_16846, RNA1509_30861} {RNA1310_51783, RNA1509_16846} {RNA1509_16846, RNA815_10152.1}

Mlig455_034878 {REF} {Length: 667} {RNA1509_30861} {RNA1310_51783} {RNA815_10152.1}

Mlig455_034891 {REF} {Length: 694} {RNA1509_1031, RNA1509_30861, RNA1509_3348, RNA1509_7571} {RNA1310_51783, RNA1509_1031, RNA1509_3348, RNA1509_7571} {RNA1509_1031, RNA1509_3348, RNA1509_7571, RNA815_10152.1}
6. MligTC455_40477 87 1.8 Mlig455_066098, Mlig455_068673

Neo: -

Age: -

Regeneration-downregulated R4: -4.243

Regeneration-depleted R4: -4.243

 SSUH2 0.952 - - - - 0.952 -

Mlig455_066098 {REF} {Length: 1581} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=108, Expect=1e-26]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=104, Expect=3e-25]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=69.3, Expect=4e-13]} {RNA1310_23200} {RNA815_29266}

Mlig455_068673 {REF} {Length: 1558} {Pfam: DnaJ central domain [PF00684.21, score=24.8]} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [RH, Score=216, Expect=8e-66]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=165, Expect=6e-47]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [RH, Score=140, Expect=2e-37]} {RNA1310_23200} {RNA815_29266}

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